RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 SUCLA2Q9P2R7 463 aaPredicted RBP5.11□□□□□ -1.59
USP44-201ENST00000258499 ANAPC7Q9UJX3 599 aa5.11□□□□□ -1.59
USP44-201ENST00000258499 PRR12Q9ULL5 1215 aa5.11□□□□□ -1.59
USP44-201ENST00000258499 MYH10P35580 1976 aa5.11□□□□□ -1.59
USP44-201ENST00000258499 DCDC2CA8MYV0 355 aa5.1□□□□□ -1.59
USP44-201ENST00000258499 F8VZ95 297 aa5.1□□□□□ -1.59
USP44-201ENST00000258499 CLDN3O15551 220 aa5.1□□□□□ -1.59
USP44-201ENST00000258499 MMP10P09238 476 aa5.1□□□□□ -1.59
USP44-201ENST00000258499 ATF2P15336 505 aa5.1□□□□□ -1.59
USP44-201ENST00000258499 PRELPP51888 382 aa5.1□□□□□ -1.59
USP44-201ENST00000258499 DLGAP5Q15398 846 aa5.1□□□□□ -1.59
USP44-201ENST00000258499 ASTE1Q2TB18 679 aaPredicted RBP5.1□□□□□ -1.59
USP44-201ENST00000258499 CBWD6Q4V339 395 aa5.1□□□□□ -1.59
USP44-201ENST00000258499 ZCWPW2Q504Y3 356 aa5.1□□□□□ -1.59
USP44-201ENST00000258499 CBWD3Q5JTY5 395 aa5.1□□□□□ -1.59
USP44-201ENST00000258499 CBWD5Q5RIA9 395 aa5.1□□□□□ -1.59
USP44-201ENST00000258499 LMBRD2Q68DH5 695 aaPredicted RBP5.1□□□□□ -1.59
USP44-201ENST00000258499 SRRM1Q8IYB3 904 aaKnown RBP5.1□□□□□ -1.59
USP44-201ENST00000258499 ZNF564Q8TBZ8 553 aaPredicted RBP5.1□□□□□ -1.59
USP44-201ENST00000258499 ACTRT1Q8TDG2 376 aa5.1□□□□□ -1.59
USP44-201ENST00000258499 EPS8L3Q8TE67 593 aaKnown RBP5.1□□□□□ -1.59
USP44-201ENST00000258499 N4BP2L2Q92802 583 aaPredicted RBP5.1□□□□□ -1.59
USP44-201ENST00000258499 KLHL29Q96CT2 875 aa5.1□□□□□ -1.59
USP44-201ENST00000258499 NT5C1BQ96P26 610 aa5.1□□□□□ -1.59
USP44-201ENST00000258499 XPO6Q96QU8 1125 aaKnown RBP5.1□□□□□ -1.59
USP44-201ENST00000258499 NEUROG2Q9H2A3 272 aa5.1□□□□□ -1.59
USP44-201ENST00000258499 SEMA4AQ9H3S1 761 aa5.1□□□□□ -1.59
USP44-201ENST00000258499 ACTR5Q9H9F9 607 aaPredicted RBP5.1□□□□□ -1.59
USP44-201ENST00000258499 VPS37BQ9H9H4 285 aa5.1□□□□□ -1.59
USP44-201ENST00000258499 SLC40A1Q9NP59 571 aa5.1□□□□□ -1.59
USP44-201ENST00000258499 AGPAT3Q9NRZ7 376 aa5.1□□□□□ -1.59
USP44-201ENST00000258499 FBXO28Q9NVF7 368 aa5.1□□□□□ -1.59
USP44-201ENST00000258499 CNOT8Q9UFF9 292 aaKnown RBP5.1□□□□□ -1.59
USP44-201ENST00000258499 NR2E1Q9Y466 385 aa5.1□□□□□ -1.59
USP44-201ENST00000258499 SYNGAP1Q96PV0 1343 aa5.1□□□□□ -1.59
USP44-201ENST00000258499 EIF4E1BA6NMX2 242 aaKnown RBP5.1□□□□□ -1.59
USP44-201ENST00000258499 HOXA7P31268 230 aaPredicted RBP5.1□□□□□ -1.59
USP44-201ENST00000258499 RWDD2BP57060 319 aa5.1□□□□□ -1.59
USP44-201ENST00000258499 LACTBP83111 547 aaPredicted RBP5.1□□□□□ -1.59
USP44-201ENST00000258499 ZBTB16Q05516 673 aa5.1□□□□□ -1.59
USP44-201ENST00000258499 BFSP1Q12934 665 aa5.1□□□□□ -1.59
USP44-201ENST00000258499 ITGB3BPQ13352 177 aaPredicted RBP5.1□□□□□ -1.59
USP44-201ENST00000258499 SETDB1Q15047 1291 aa5.1□□□□□ -1.59
USP44-201ENST00000258499 EPHA7Q15375 998 aa5.1□□□□□ -1.59
USP44-201ENST00000258499 CEP55Q53EZ4 464 aa5.1□□□□□ -1.59
USP44-201ENST00000258499 C6orf118Q5T5N4 469 aa5.1□□□□□ -1.59
USP44-201ENST00000258499 LRIG3Q6UXM1 1119 aa5.1□□□□□ -1.59
USP44-201ENST00000258499 TMC3Q7Z5M5 1100 aa5.1□□□□□ -1.59
USP44-201ENST00000258499 NT5DC3Q86UY8 548 aa5.1□□□□□ -1.59
USP44-201ENST00000258499 CERS5Q8N5B7 392 aa5.1□□□□□ -1.59
USP44-201ENST00000258499 XXYLT1Q8NBI6 393 aa5.1□□□□□ -1.59
USP44-201ENST00000258499 ARHGEF2Q92974 986 aaKnown RBP5.1□□□□□ -1.59
USP44-201ENST00000258499 RSRC1Q96IZ7 334 aaKnown RBP5.1□□□□□ -1.59
USP44-201ENST00000258499 ACCSQ96QU6 501 aa5.1□□□□□ -1.59
USP44-201ENST00000258499 CBWD1Q9BRT8 395 aa5.1□□□□□ -1.59
USP44-201ENST00000258499 DDX20Q9UHI6 824 aaKnown RBP5.1□□□□□ -1.59
USP44-201ENST00000258499 DUOX1Q9NRD9 1551 aa5.1□□□□□ -1.59
USP44-201ENST00000258499 H0YIN7 160 aa5.1□□□□□ -1.59
USP44-201ENST00000258499 SLC16A3O15427 465 aaKnown RBP5.1□□□□□ -1.59
USP44-201ENST00000258499 SHOX2O60902 331 aaPredicted RBP5.1□□□□□ -1.59
USP44-201ENST00000258499 SUN1O94901 812 aa5.1□□□□□ -1.59
USP44-201ENST00000258499 LCA5LO95447 670 aa5.1□□□□□ -1.59
USP44-201ENST00000258499 SHBGP04278 402 aa5.1□□□□□ -1.59
USP44-201ENST00000258499 TMEM253P0C7T8 217 aa5.1□□□□□ -1.59
USP44-201ENST00000258499 GYS1P13807 737 aa5.1□□□□□ -1.59
USP44-201ENST00000258499 IL1R1P14778 569 aa5.1□□□□□ -1.59
USP44-201ENST00000258499 ATP5DP30049 168 aa5.1□□□□□ -1.59
USP44-201ENST00000258499 NSFP46459 744 aaKnown RBP5.1□□□□□ -1.59
USP44-201ENST00000258499 MFAP3P55082 362 aa5.1□□□□□ -1.59
USP44-201ENST00000258499 IFI35P80217 286 aaPredicted RBP5.1□□□□□ -1.59
USP44-201ENST00000258499 ADCY2Q08462 1091 aa5.1□□□□□ -1.59
USP44-201ENST00000258499 MTM1Q13496 603 aa5.1□□□□□ -1.59
USP44-201ENST00000258499 BYSLQ13895 437 aaKnown RBP5.1□□□□□ -1.59
USP44-201ENST00000258499 TMED2Q15363 201 aa5.1□□□□□ -1.59
USP44-201ENST00000258499 CC2D2BQ6DHV5 1058 aa5.1□□□□□ -1.59
USP44-201ENST00000258499 RNF207Q6ZRF8 634 aa5.1□□□□□ -1.59
USP44-201ENST00000258499 BARGINQ6ZT62 677 aa5.1□□□□□ -1.59
USP44-201ENST00000258499 PARP9Q8IXQ6 854 aa5.1□□□□□ -1.59
USP44-201ENST00000258499 ACER1Q8TDN7 264 aa5.1□□□□□ -1.59
USP44-201ENST00000258499 ATG4AQ8WYN0 398 aa5.1□□□□□ -1.59
USP44-201ENST00000258499 KRT35Q92764 455 aa5.1□□□□□ -1.59
USP44-201ENST00000258499 HAUS1Q96CS2 278 aa5.1□□□□□ -1.59
USP44-201ENST00000258499 RUNDC3BQ96NL0 473 aa5.1□□□□□ -1.59
USP44-201ENST00000258499 KIFC3Q9BVG8 833 aa5.1□□□□□ -1.59
USP44-201ENST00000258499 SYNCQ9H7C4 482 aa5.1□□□□□ -1.59
USP44-201ENST00000258499 C1orf112Q9NSG2 853 aa5.1□□□□□ -1.59
USP44-201ENST00000258499 KLHL14Q9P2G3 628 aa5.1□□□□□ -1.59
USP44-201ENST00000258499 TTC7AQ9ULT0 858 aaPredicted RBP5.1□□□□□ -1.59
USP44-201ENST00000258499 ZNF148Q9UQR1 794 aa5.1□□□□□ -1.59
USP44-201ENST00000258499 TRAF3IP3Q9Y228 551 aa5.1□□□□□ -1.59
USP44-201ENST00000258499 GRIN2DO15399 1336 aa5.1□□□□□ -1.59
USP44-201ENST00000258499 AKAP11Q9UKA4 1901 aa5.09□□□□□ -1.59
USP44-201ENST00000258499 TMEM150BA6NC51 233 aa5.09□□□□□ -1.59
USP44-201ENST00000258499 MIF4GDA9UHW6 222 aaKnown RBP5.09□□□□□ -1.59
USP44-201ENST00000258499 PODXLO00592 558 aa5.09□□□□□ -1.59
USP44-201ENST00000258499 MEIS2O14770 477 aa5.09□□□□□ -1.59
USP44-201ENST00000258499 CHRNA3P32297 505 aa5.09□□□□□ -1.59
USP44-201ENST00000258499 MARCKSL1P49006 195 aa5.09□□□□□ -1.59
USP44-201ENST00000258499 MAPK7Q13164 816 aa5.09□□□□□ -1.59
USP44-201ENST00000258499 DMP1Q13316 513 aaPredicted RBP5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms