RNA–Protein interactions for RNA: ENST00000244745.3

SOX4-201, Transcript of SRY-box 4, humanhuman

APPRIS P1 BASIC

Gene SOX4, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4-201ENST00000244745 CCNI2Q6ZMN8 369 aaPredicted RBP21.2■□□□□ 0.98
SOX4-201ENST00000244745 SNF8Q96H20 258 aa21.2■□□□□ 0.98
SOX4-201ENST00000244745 PPARGC1AQ9UBK2 798 aaKnown RBP21.2■□□□□ 0.98
SOX4-201ENST00000244745 TMEM270Q6UE05 265 aa21.2■□□□□ 0.98
SOX4-201ENST00000244745 HIPK4Q8NE63 616 aa21.2■□□□□ 0.98
SOX4-201ENST00000244745 PRMT1Q99873 361 aaKnown RBP21.2■□□□□ 0.98
SOX4-201ENST00000244745 CCDC195A0A1B0GUA6 201 aa21.2■□□□□ 0.98
SOX4-201ENST00000244745 SEMA3FQ13275 785 aa21.2■□□□□ 0.98
SOX4-201ENST00000244745 EAPPQ56P03 285 aaPredicted RBP21.2■□□□□ 0.98
SOX4-201ENST00000244745 WNT8AQ9H1J5 351 aa21.2■□□□□ 0.98
SOX4-201ENST00000244745 RPF1Q9H9Y2 349 aaKnown RBP21.2■□□□□ 0.98
SOX4-201ENST00000244745 RASSF10A6NK89 507 aa21.19■□□□□ 0.98
SOX4-201ENST00000244745 JAK3P52333 1124 aa21.19■□□□□ 0.98
SOX4-201ENST00000244745 CORO7P57737 925 aa21.19■□□□□ 0.98
SOX4-201ENST00000244745 ART3Q13508 389 aa21.19■□□□□ 0.98
SOX4-201ENST00000244745 KCTD2Q14681 263 aa21.19■□□□□ 0.98
SOX4-201ENST00000244745 RAB44Q7Z6P3 723 aaPredicted RBP21.19■□□□□ 0.98
SOX4-201ENST00000244745 FGD4Q96M96 766 aa21.19■□□□□ 0.98
SOX4-201ENST00000244745 EIF2AK1Q9BQI3 630 aaKnown RBP21.19■□□□□ 0.98
SOX4-201ENST00000244745 ZNF18P17022 549 aa21.19■□□□□ 0.98
SOX4-201ENST00000244745 PLA2G4AP47712 749 aa21.19■□□□□ 0.98
SOX4-201ENST00000244745 FRMD5Q7Z6J6 570 aa21.19■□□□□ 0.98
SOX4-201ENST00000244745 RFFLQ8WZ73 363 aa21.19■□□□□ 0.98
SOX4-201ENST00000244745 DRC3Q9H069 523 aa21.19■□□□□ 0.98
SOX4-201ENST00000244745 ETNK1Q9HBU6 452 aa21.19■□□□□ 0.98
SOX4-201ENST00000244745 IL1RL1Q01638 556 aa21.19■□□□□ 0.98
SOX4-201ENST00000244745 GRIN1Q05586 938 aa21.19■□□□□ 0.98
SOX4-201ENST00000244745 QRICH1Q2TAL8 776 aa21.19■□□□□ 0.98
SOX4-201ENST00000244745 SLFN12LQ6IEE8 588 aa21.19■□□□□ 0.98
SOX4-201ENST00000244745 HPS5Q9UPZ3 1129 aa21.19■□□□□ 0.98
SOX4-201ENST00000244745 SSTR3P32745 418 aaPredicted RBP21.19■□□□□ 0.98
SOX4-201ENST00000244745 RCSD1Q6JBY9 416 aa21.19■□□□□ 0.98
SOX4-201ENST00000244745 EPB41L4AQ9HCS5 686 aaPredicted RBP21.19■□□□□ 0.98
SOX4-201ENST00000244745 TFR2Q9UP52 801 aa21.19■□□□□ 0.98
SOX4-201ENST00000244745 NEXMIFQ5QGS0 1516 aa21.19■□□□□ 0.98
SOX4-201ENST00000244745 MGEA5O60502 916 aa21.18■□□□□ 0.98
SOX4-201ENST00000244745 IL17RAQ96F46 866 aa21.18■□□□□ 0.98
SOX4-201ENST00000244745 SPDYE16A6NNV3 312 aaPredicted RBP21.18■□□□□ 0.98
SOX4-201ENST00000244745 THOC5Q13769 683 aaKnown RBP21.18■□□□□ 0.98
SOX4-201ENST00000244745 NCAPHQ15003 741 aa21.18■□□□□ 0.98
SOX4-201ENST00000244745 SPDYE2Q495Y8 402 aa21.18■□□□□ 0.98
SOX4-201ENST00000244745 RNPC3Q96LT9 517 aaKnown RBP21.18■□□□□ 0.98
SOX4-201ENST00000244745 CCT8L2Q96SF2 557 aa21.18■□□□□ 0.98
SOX4-201ENST00000244745 RBM12Q9NTZ6 932 aaKnown RBP21.18■□□□□ 0.98
SOX4-201ENST00000244745 DCTN4Q9UJW0 460 aa21.18■□□□□ 0.98
SOX4-201ENST00000244745 SLC4A7Q9Y6M7 1214 aa21.18■□□□□ 0.98
SOX4-201ENST00000244745 KIF22Q14807 665 aa21.18■□□□□ 0.98
SOX4-201ENST00000244745 TRIML2Q8N7C3 387 aa21.18■□□□□ 0.98
SOX4-201ENST00000244745 PLA2G12BQ9BX93 195 aa21.18■□□□□ 0.98
SOX4-201ENST00000244745 ATP6V0A4Q9HBG4 840 aa21.18■□□□□ 0.98
SOX4-201ENST00000244745 RHOBTB3O94955 611 aa21.18■□□□□ 0.98
SOX4-201ENST00000244745 BRINP3Q76B58 766 aa21.18■□□□□ 0.98
SOX4-201ENST00000244745 TTC25Q96NG3 672 aa21.18■□□□□ 0.98
SOX4-201ENST00000244745 LRRC37BQ96QE4 947 aa21.18■□□□□ 0.98
SOX4-201ENST00000244745 C7orf25Q9BPX7 421 aa21.18■□□□□ 0.98
SOX4-201ENST00000244745 TRIM51Q9BSJ1 452 aa21.17■□□□□ 0.98
SOX4-201ENST00000244745 SURF1Q15526 300 aa21.17■□□□□ 0.98
SOX4-201ENST00000244745 TRIM59Q8IWR1 403 aa21.17■□□□□ 0.98
SOX4-201ENST00000244745 REXO1L1PQ8IX06 675 aa21.17■□□□□ 0.98
SOX4-201ENST00000244745 CCSER1Q9C0I3 900 aa21.17■□□□□ 0.98
SOX4-201ENST00000244745 GGT7Q9UJ14 662 aa21.17■□□□□ 0.98
SOX4-201ENST00000244745 KRT14P02533 472 aa21.17■□□□□ 0.98
SOX4-201ENST00000244745 KRT17Q04695 432 aa21.17■□□□□ 0.98
SOX4-201ENST00000244745 NR1H3Q13133 447 aa21.17■□□□□ 0.98
SOX4-201ENST00000244745 DHX34Q14147 1143 aaKnown RBP21.17■□□□□ 0.98
SOX4-201ENST00000244745 IRX1P78414 480 aaPredicted RBP21.17■□□□□ 0.98
SOX4-201ENST00000244745 RGS9BPQ6ZS82 235 aa21.17■□□□□ 0.98
SOX4-201ENST00000244745 NLRP4Q96MN2 994 aa21.17■□□□□ 0.98
SOX4-201ENST00000244745 RPS6KC1Q96S38 1066 aa21.17■□□□□ 0.98
SOX4-201ENST00000244745 EMSYQ7Z589 1322 aa21.17■□□□□ 0.98
SOX4-201ENST00000244745 TMED8Q6PL24 325 aaPredicted RBP21.17■□□□□ 0.98
SOX4-201ENST00000244745 KLC2Q9H0B6 622 aa21.17■□□□□ 0.98
SOX4-201ENST00000244745 ZBTB12Q9Y330 459 aaPredicted RBP21.17■□□□□ 0.98
SOX4-201ENST00000244745 PSMD14O00487 310 aa21.16■□□□□ 0.98
SOX4-201ENST00000244745 TTI1O43156 1089 aa21.16■□□□□ 0.98
SOX4-201ENST00000244745 AP5Z1O43299 807 aa21.16■□□□□ 0.98
SOX4-201ENST00000244745 HNRNPH1P31943 449 aaKnown RBP21.16■□□□□ 0.98
SOX4-201ENST00000244745 GPS1Q13098 491 aa21.16■□□□□ 0.98
SOX4-201ENST00000244745 NOA1Q8NC60 698 aaKnown RBP21.16■□□□□ 0.98
SOX4-201ENST00000244745 AGPAT1Q99943 283 aa21.16■□□□□ 0.98
SOX4-201ENST00000244745 SLC5A4Q9NY91 659 aa21.16■□□□□ 0.98
SOX4-201ENST00000244745 DENND3A2RUS2 1198 aa21.16■□□□□ 0.98
SOX4-201ENST00000244745 XPOTO43592 962 aaKnown RBP21.16■□□□□ 0.98
SOX4-201ENST00000244745 KRT37O76014 449 aa21.16■□□□□ 0.98
SOX4-201ENST00000244745 LDHAP00338 332 aaKnown RBP21.16■□□□□ 0.98
SOX4-201ENST00000244745 NPR1P16066 1061 aa21.16■□□□□ 0.98
SOX4-201ENST00000244745 CDR2Q01850 454 aa21.16■□□□□ 0.98
SOX4-201ENST00000244745 SLC18A3Q16572 532 aa21.16■□□□□ 0.98
SOX4-201ENST00000244745 SLC27A3Q5K4L6 730 aa21.16■□□□□ 0.98
SOX4-201ENST00000244745 NSUN4Q96CB9 384 aaKnown RBP21.16■□□□□ 0.98
SOX4-201ENST00000244745 NUDCD1Q96RS6 583 aa21.16■□□□□ 0.98
SOX4-201ENST00000244745 RPS6KA4O75676 772 aa21.16■□□□□ 0.98
SOX4-201ENST00000244745 DNAJC8O75937 253 aaPredicted RBP21.16■□□□□ 0.98
SOX4-201ENST00000244745 HAUS5O94927 633 aa21.16■□□□□ 0.98
SOX4-201ENST00000244745 GPSM2P81274 684 aa21.16■□□□□ 0.98
SOX4-201ENST00000244745 SERPINI1Q99574 410 aa21.16■□□□□ 0.98
SOX4-201ENST00000244745 HAUS8Q9BT25 410 aa21.16■□□□□ 0.98
SOX4-201ENST00000244745 SMYD3Q9H7B4 428 aa21.16■□□□□ 0.98
SOX4-201ENST00000244745 RAVER2Q9HCJ3 691 aaKnown RBP21.16■□□□□ 0.98
SOX4-201ENST00000244745 FHOD1Q9Y613 1164 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms