RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 TGFB1I1O43294 461 aa10.17□□□□□ -0.78
HLA-DOA-201ENST00000229829 ABCB4P21439 1286 aa10.17□□□□□ -0.78
HLA-DOA-201ENST00000229829 NMT1P30419 496 aaKnown RBP10.17□□□□□ -0.78
HLA-DOA-201ENST00000229829 GALCP54803 685 aa10.17□□□□□ -0.78
HLA-DOA-201ENST00000229829 JAM2P57087 298 aa10.17□□□□□ -0.78
HLA-DOA-201ENST00000229829 ZNF844Q08AG5 666 aa10.17□□□□□ -0.78
HLA-DOA-201ENST00000229829 ANKRD20A8PQ5CZ79 823 aa10.17□□□□□ -0.78
HLA-DOA-201ENST00000229829 BZW1Q7L1Q6 419 aaKnown RBP10.17□□□□□ -0.78
HLA-DOA-201ENST00000229829 GLYCTKQ8IVS8 523 aa10.17□□□□□ -0.78
HLA-DOA-201ENST00000229829 ARFGAP2Q8N6H7 521 aa10.17□□□□□ -0.78
HLA-DOA-201ENST00000229829 OLIG1Q8TAK6 271 aa10.17□□□□□ -0.78
HLA-DOA-201ENST00000229829 MBOAT7Q96N66 472 aa10.17□□□□□ -0.78
HLA-DOA-201ENST00000229829 TSC22D3Q99576 134 aa10.17□□□□□ -0.78
HLA-DOA-201ENST00000229829 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.17□□□□□ -0.78
HLA-DOA-201ENST00000229829 IGSF9BQ9UPX0 1349 aa10.17□□□□□ -0.78
HLA-DOA-201ENST00000229829 PDXKO00764 312 aa10.17□□□□□ -0.78
HLA-DOA-201ENST00000229829 ATP6V1G2O95670 118 aa10.17□□□□□ -0.78
HLA-DOA-201ENST00000229829 H2AFZP0C0S5 128 aa10.17□□□□□ -0.78
HLA-DOA-201ENST00000229829 HOXA7P31268 230 aaPredicted RBP10.17□□□□□ -0.78
HLA-DOA-201ENST00000229829 PRKCIP41743 596 aa10.17□□□□□ -0.78
HLA-DOA-201ENST00000229829 CTTNQ14247 550 aaKnown RBP10.17□□□□□ -0.78
HLA-DOA-201ENST00000229829 H2AFVQ71UI9 128 aa10.17□□□□□ -0.78
HLA-DOA-201ENST00000229829 NT5DC3Q86UY8 548 aa10.17□□□□□ -0.78
HLA-DOA-201ENST00000229829 SLFN12Q8IYM2 578 aa10.17□□□□□ -0.78
HLA-DOA-201ENST00000229829 FLAD1Q8NFF5 587 aa10.17□□□□□ -0.78
HLA-DOA-201ENST00000229829 PBKQ96KB5 322 aa10.17□□□□□ -0.78
HLA-DOA-201ENST00000229829 NENFQ9UMX5 172 aa10.17□□□□□ -0.78
HLA-DOA-201ENST00000229829 STXBP5LQ9Y2K9 1186 aa10.17□□□□□ -0.78
HLA-DOA-201ENST00000229829 SLX4Q8IY92 1834 aa10.17□□□□□ -0.78
HLA-DOA-201ENST00000229829 A0A0G2JMZ2 1700 aa10.16□□□□□ -0.78
HLA-DOA-201ENST00000229829 FLOT1O75955 427 aa10.16□□□□□ -0.78
HLA-DOA-201ENST00000229829 GDF11O95390 407 aa10.16□□□□□ -0.78
HLA-DOA-201ENST00000229829 WLSQ5T9L3 541 aa10.16□□□□□ -0.78
HLA-DOA-201ENST00000229829 EMC10Q5UCC4 262 aa10.16□□□□□ -0.78
HLA-DOA-201ENST00000229829 PALB2Q86YC2 1186 aa10.16□□□□□ -0.78
HLA-DOA-201ENST00000229829 DYDC1Q8WWB3 177 aa10.16□□□□□ -0.78
HLA-DOA-201ENST00000229829 TRIM51Q9BSJ1 452 aa10.16□□□□□ -0.78
HLA-DOA-201ENST00000229829 CNOT8Q9UFF9 292 aaKnown RBP10.16□□□□□ -0.78
HLA-DOA-201ENST00000229829 PPP1R9AQ9ULJ8 1098 aa10.16□□□□□ -0.78
HLA-DOA-201ENST00000229829 KLHL33A6NCF5 533 aa10.16□□□□□ -0.78
HLA-DOA-201ENST00000229829 HMGB1P1B2RPK0 211 aaPredicted RBP10.16□□□□□ -0.78
HLA-DOA-201ENST00000229829 CTNND1O60716 968 aaKnown RBP10.16□□□□□ -0.78
HLA-DOA-201ENST00000229829 GNAT1P11488 350 aa10.16□□□□□ -0.78
HLA-DOA-201ENST00000229829 INHBEP58166 350 aa10.16□□□□□ -0.78
HLA-DOA-201ENST00000229829 TAF11Q15544 211 aa10.16□□□□□ -0.78
HLA-DOA-201ENST00000229829 SLC30A9Q6PML9 568 aa10.16□□□□□ -0.78
HLA-DOA-201ENST00000229829 MGARPQ8TDB4 240 aa10.16□□□□□ -0.78
HLA-DOA-201ENST00000229829 TYW1Q9NV66 732 aaKnown RBP10.16□□□□□ -0.78
HLA-DOA-201ENST00000229829 BZW2Q9Y6E2 419 aaKnown RBP10.16□□□□□ -0.78
HLA-DOA-201ENST00000229829 CHMP2AO43633 222 aa10.16□□□□□ -0.78
HLA-DOA-201ENST00000229829 CALUO43852 315 aaPredicted RBP10.16□□□□□ -0.78
HLA-DOA-201ENST00000229829 FGGP02679 453 aa10.16□□□□□ -0.78
HLA-DOA-201ENST00000229829 HLA-DOAP06340 250 aa10.16□□□□□ -0.78
HLA-DOA-201ENST00000229829 NEFHP12036 1026 aa10.16□□□□□ -0.78
HLA-DOA-201ENST00000229829 IKQ13123 557 aaPredicted RBP10.16□□□□□ -0.78
HLA-DOA-201ENST00000229829 PRPF4BQ13523 1007 aaKnown RBP10.16□□□□□ -0.78
HLA-DOA-201ENST00000229829 C10orf76Q5T2E6 689 aa10.16□□□□□ -0.78
HLA-DOA-201ENST00000229829 DCAF12L1Q5VU92 463 aa10.16□□□□□ -0.78
HLA-DOA-201ENST00000229829 SLFN11Q7Z7L1 901 aa10.16□□□□□ -0.78
HLA-DOA-201ENST00000229829 ELAC2Q9BQ52 826 aaKnown RBP10.16□□□□□ -0.78
HLA-DOA-201ENST00000229829 ZC3H12CQ9C0D7 883 aaKnown RBP10.16□□□□□ -0.78
HLA-DOA-201ENST00000229829 TAS2R14Q9NYV8 317 aa10.16□□□□□ -0.78
HLA-DOA-201ENST00000229829 MYO3BQ8WXR4 1341 aa10.15□□□□□ -0.78
HLA-DOA-201ENST00000229829 LRRN2O75325 713 aa10.15□□□□□ -0.78
HLA-DOA-201ENST00000229829 JAG1P78504 1218 aa10.15□□□□□ -0.78
HLA-DOA-201ENST00000229829 ZNF211Q13398 564 aaPredicted RBP10.15□□□□□ -0.78
HLA-DOA-201ENST00000229829 AADACL2Q6P093 401 aa10.15□□□□□ -0.78
HLA-DOA-201ENST00000229829 SLC35G2Q8TBE7 412 aa10.15□□□□□ -0.78
HLA-DOA-201ENST00000229829 BORCS6Q96GS4 357 aa10.15□□□□□ -0.78
HLA-DOA-201ENST00000229829 EIF2AK1Q9BQI3 630 aaKnown RBP10.15□□□□□ -0.78
HLA-DOA-201ENST00000229829 OSBPL1AQ9BXW6 950 aa10.15□□□□□ -0.78
HLA-DOA-201ENST00000229829 VAV3Q9UKW4 847 aa10.15□□□□□ -0.78
HLA-DOA-201ENST00000229829 A6NNZ2 444 aa10.15□□□□□ -0.78
HLA-DOA-201ENST00000229829 BHMG1C9JSJ3 638 aaPredicted RBP10.15□□□□□ -0.78
HLA-DOA-201ENST00000229829 F5H6K3 240 aa10.15□□□□□ -0.78
HLA-DOA-201ENST00000229829 CES2O00748 559 aa10.15□□□□□ -0.78
HLA-DOA-201ENST00000229829 PPEF1O14829 653 aaPredicted RBP10.15□□□□□ -0.78
HLA-DOA-201ENST00000229829 RTN2O75298 545 aa10.15□□□□□ -0.78
HLA-DOA-201ENST00000229829 TRIM49P0CI25 452 aa10.15□□□□□ -0.78
HLA-DOA-201ENST00000229829 TRIM49CP0CI26 452 aa10.15□□□□□ -0.78
HLA-DOA-201ENST00000229829 MAGOHP61326 146 aaKnown RBP10.15□□□□□ -0.78
HLA-DOA-201ENST00000229829 UBXN2AP68543 259 aa10.15□□□□□ -0.78
HLA-DOA-201ENST00000229829 KLRC3Q07444 240 aa10.15□□□□□ -0.78
HLA-DOA-201ENST00000229829 GRIK3Q13003 919 aa10.15□□□□□ -0.78
HLA-DOA-201ENST00000229829 CUL1Q13616 776 aa10.15□□□□□ -0.78
HLA-DOA-201ENST00000229829 TUBB8Q3ZCM7 444 aa10.15□□□□□ -0.78
HLA-DOA-201ENST00000229829 CERKLQ49MI3 558 aaPredicted RBP10.15□□□□□ -0.78
HLA-DOA-201ENST00000229829 CBWD6Q4V339 395 aa10.15□□□□□ -0.78
HLA-DOA-201ENST00000229829 CBWD3Q5JTY5 395 aa10.15□□□□□ -0.78
HLA-DOA-201ENST00000229829 CBWD5Q5RIA9 395 aa10.15□□□□□ -0.78
HLA-DOA-201ENST00000229829 RINT1Q6NUQ1 792 aa10.15□□□□□ -0.78
HLA-DOA-201ENST00000229829 SH3BP5LQ7L8J4 393 aa10.15□□□□□ -0.78
HLA-DOA-201ENST00000229829 KIAA0825Q8IV33 1275 aa10.15□□□□□ -0.78
HLA-DOA-201ENST00000229829 SPICE1Q8N0Z3 855 aa10.15□□□□□ -0.78
HLA-DOA-201ENST00000229829 MAGOHBQ96A72 148 aaKnown RBP10.15□□□□□ -0.78
HLA-DOA-201ENST00000229829 ARHGEF26Q96DR7 871 aa10.15□□□□□ -0.78
HLA-DOA-201ENST00000229829 NOP53Q9NZM5 478 aaKnown RBP10.15□□□□□ -0.78
HLA-DOA-201ENST00000229829 CHORDC1Q9UHD1 332 aaPredicted RBP10.15□□□□□ -0.78
HLA-DOA-201ENST00000229829 SLC12A6Q9UHW9 1150 aa10.15□□□□□ -0.78
HLA-DOA-201ENST00000229829 ZMYM2Q9UBW7 1377 aa10.15□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms