RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 JAMLQ86YT9 394 aa14.73□□□□□ -0.05
NFKB1-201ENST00000226574 PYROXD1Q8WU10 500 aa14.73□□□□□ -0.05
NFKB1-201ENST00000226574 MTRQ99707 1265 aa14.73□□□□□ -0.05
NFKB1-201ENST00000226574 EDEM3Q9BZQ6 932 aa14.73□□□□□ -0.05
NFKB1-201ENST00000226574 THAP2Q9H0W7 228 aa14.73□□□□□ -0.05
NFKB1-201ENST00000226574 SLITRK6Q9H5Y7 841 aa14.73□□□□□ -0.05
NFKB1-201ENST00000226574 PICK1Q9NRD5 415 aa14.73□□□□□ -0.05
NFKB1-201ENST00000226574 PCSK1NQ9UHG2 260 aa14.73□□□□□ -0.05
NFKB1-201ENST00000226574 IPO5O00410 1097 aaKnown RBP14.73□□□□□ -0.05
NFKB1-201ENST00000226574 CAND2O75155 1236 aa14.73□□□□□ -0.05
NFKB1-201ENST00000226574 STAM2O75886 525 aa14.73□□□□□ -0.05
NFKB1-201ENST00000226574 CRKP46108 304 aa14.73□□□□□ -0.05
NFKB1-201ENST00000226574 PSMC6P62333 389 aa14.73□□□□□ -0.05
NFKB1-201ENST00000226574 CYFIP1Q7L576 1253 aa14.73□□□□□ -0.05
NFKB1-201ENST00000226574 ZNF571Q7Z3V5 609 aaPredicted RBP14.73□□□□□ -0.05
NFKB1-201ENST00000226574 CATSPER3Q86XQ3 398 aa14.73□□□□□ -0.05
NFKB1-201ENST00000226574 RFX6Q8HWS3 928 aa14.73□□□□□ -0.05
NFKB1-201ENST00000226574 KITP10721 976 aa14.73□□□□□ -0.05
NFKB1-201ENST00000226574 HSPA6P17066 643 aa14.73□□□□□ -0.05
NFKB1-201ENST00000226574 CYP11B2P19099 503 aa14.73□□□□□ -0.05
NFKB1-201ENST00000226574 KRT17Q04695 432 aa14.73□□□□□ -0.05
NFKB1-201ENST00000226574 KRT81Q14533 505 aa14.73□□□□□ -0.05
NFKB1-201ENST00000226574 SF3B3Q15393 1217 aaKnown RBP14.73□□□□□ -0.05
NFKB1-201ENST00000226574 AOC3Q16853 763 aa14.73□□□□□ -0.05
NFKB1-201ENST00000226574 SH3RF1Q7Z6J0 888 aa14.73□□□□□ -0.05
NFKB1-201ENST00000226574 SEPT10Q9P0V9 454 aa14.73□□□□□ -0.05
NFKB1-201ENST00000226574 LRRC10BA6NIK2 292 aa14.72□□□□□ -0.05
NFKB1-201ENST00000226574 MED24O75448 989 aa14.72□□□□□ -0.05
NFKB1-201ENST00000226574 MT-ND3P03897 115 aa14.72□□□□□ -0.05
NFKB1-201ENST00000226574 PHBP35232 272 aa14.72□□□□□ -0.05
NFKB1-201ENST00000226574 SREK1Q8WXA9 508 aaKnown RBP14.72□□□□□ -0.05
NFKB1-201ENST00000226574 RAPGEF5Q92565 580 aa14.72□□□□□ -0.05
NFKB1-201ENST00000226574 TRIM6Q9C030 488 aaPredicted RBP14.72□□□□□ -0.05
NFKB1-201ENST00000226574 OVOS2A0A0G2JMS6 1433 aa14.72□□□□□ -0.05
NFKB1-201ENST00000226574 ENO4A6NNW6 628 aa14.72□□□□□ -0.05
NFKB1-201ENST00000226574 COMTP21964 271 aa14.72□□□□□ -0.05
NFKB1-201ENST00000226574 SERPINB6P35237 376 aa14.72□□□□□ -0.05
NFKB1-201ENST00000226574 FMO5P49326 533 aa14.72□□□□□ -0.05
NFKB1-201ENST00000226574 BYSLQ13895 437 aaKnown RBP14.72□□□□□ -0.05
NFKB1-201ENST00000226574 DNAJC24Q6P3W2 148 aa14.72□□□□□ -0.05
NFKB1-201ENST00000226574 ARHGAP24Q8N264 748 aa14.72□□□□□ -0.05
NFKB1-201ENST00000226574 CPA5Q8WXQ8 436 aa14.72□□□□□ -0.05
NFKB1-201ENST00000226574 ATG4AQ8WYN0 398 aa14.72□□□□□ -0.05
NFKB1-201ENST00000226574 ISCUQ9H1K1 167 aa14.72□□□□□ -0.05
NFKB1-201ENST00000226574 TMEM206Q9H813 350 aa14.72□□□□□ -0.05
NFKB1-201ENST00000226574 PALM3A6NDB9 673 aaPredicted RBP14.72□□□□□ -0.05
NFKB1-201ENST00000226574 MIF4GDA9UHW6 222 aaKnown RBP14.72□□□□□ -0.05
NFKB1-201ENST00000226574 INO80B-WBP1J3KQ70 363 aa14.72□□□□□ -0.05
NFKB1-201ENST00000226574 LGSNQ5TDP6 509 aa14.72□□□□□ -0.05
NFKB1-201ENST00000226574 CC2D2BQ6DHV5 1058 aa14.72□□□□□ -0.05
NFKB1-201ENST00000226574 IRF2BP1Q8IU81 584 aa14.72□□□□□ -0.05
NFKB1-201ENST00000226574 ANKMY2Q8IV38 441 aa14.72□□□□□ -0.05
NFKB1-201ENST00000226574 LRRC34Q8IZ02 419 aa14.72□□□□□ -0.05
NFKB1-201ENST00000226574 DTX3LQ8TDB6 740 aa14.72□□□□□ -0.05
NFKB1-201ENST00000226574 C18orf8Q96DM3 657 aa14.72□□□□□ -0.05
NFKB1-201ENST00000226574 INO80BQ9C086 356 aaPredicted RBP14.72□□□□□ -0.05
NFKB1-201ENST00000226574 DENND3A2RUS2 1198 aa14.71□□□□□ -0.05
NFKB1-201ENST00000226574 CFAP69A5D8W1 941 aa14.71□□□□□ -0.05
NFKB1-201ENST00000226574 SKAP2O75563 359 aaPredicted RBP14.71□□□□□ -0.05
NFKB1-201ENST00000226574 APBA3O96018 575 aa14.71□□□□□ -0.05
NFKB1-201ENST00000226574 SRGAP2CP0DJJ0 459 aa14.71□□□□□ -0.05
NFKB1-201ENST00000226574 MAP7D1Q3KQU3 841 aa14.71□□□□□ -0.05
NFKB1-201ENST00000226574 FRMD5Q7Z6J6 570 aa14.71□□□□□ -0.05
NFKB1-201ENST00000226574 CYP2W1Q8TAV3 490 aa14.71□□□□□ -0.05
NFKB1-201ENST00000226574 EPS8L3Q8TE67 593 aaKnown RBP14.71□□□□□ -0.05
NFKB1-201ENST00000226574 AGPAT1Q99943 283 aa14.71□□□□□ -0.05
NFKB1-201ENST00000226574 PI4K2AQ9BTU6 479 aa14.71□□□□□ -0.05
NFKB1-201ENST00000226574 TNS3Q68CZ2 1445 aa14.71□□□□□ -0.05
NFKB1-201ENST00000226574 RIMS1Q86UR5 1692 aaKnown RBP14.71□□□□□ -0.05
NFKB1-201ENST00000226574 PDXKO00764 312 aa14.71□□□□□ -0.05
NFKB1-201ENST00000226574 AKAP3O75969 853 aa14.71□□□□□ -0.05
NFKB1-201ENST00000226574 MYBL1P10243 752 aa14.71□□□□□ -0.05
NFKB1-201ENST00000226574 GPS1Q13098 491 aa14.71□□□□□ -0.05
NFKB1-201ENST00000226574 KIF22Q14807 665 aa14.71□□□□□ -0.05
NFKB1-201ENST00000226574 HADHQ16836 314 aaKnown RBP14.71□□□□□ -0.05
NFKB1-201ENST00000226574 NXNQ6DKJ4 435 aa14.71□□□□□ -0.05
NFKB1-201ENST00000226574 DCLK2Q8N568 766 aa14.71□□□□□ -0.05
NFKB1-201ENST00000226574 VGLL2Q8N8G2 317 aa14.71□□□□□ -0.05
NFKB1-201ENST00000226574 TPCN2Q8NHX9 752 aa14.71□□□□□ -0.05
NFKB1-201ENST00000226574 LRRC37BQ96QE4 947 aa14.71□□□□□ -0.05
NFKB1-201ENST00000226574 ERP44Q9BS26 406 aa14.71□□□□□ -0.05
NFKB1-201ENST00000226574 A0A1W2PQJ5 194 aa14.71□□□□□ -0.05
NFKB1-201ENST00000226574 FOXN3O00409 490 aaPredicted RBP14.71□□□□□ -0.05
NFKB1-201ENST00000226574 ESRRAP11474 423 aaPredicted RBP14.71□□□□□ -0.05
NFKB1-201ENST00000226574 CHRNA3P32297 505 aa14.71□□□□□ -0.05
NFKB1-201ENST00000226574 YARSP54577 528 aaKnown RBP14.71□□□□□ -0.05
NFKB1-201ENST00000226574 ERVK-9P63128 1117 aa14.71□□□□□ -0.05
NFKB1-201ENST00000226574 CEP128Q6ZU80 1094 aa14.71□□□□□ -0.05
NFKB1-201ENST00000226574 THNSL1Q8IYQ7 743 aa14.71□□□□□ -0.05
NFKB1-201ENST00000226574 ZBED8Q8IZ13 594 aa14.71□□□□□ -0.05
NFKB1-201ENST00000226574 SLC4A9Q96Q91 983 aa14.71□□□□□ -0.05
NFKB1-201ENST00000226574 TMEM120BA0PK00 339 aa14.71□□□□□ -0.06
NFKB1-201ENST00000226574 MARK3P27448 753 aa14.71□□□□□ -0.06
NFKB1-201ENST00000226574 INTS5Q6P9B9 1019 aaKnown RBP14.71□□□□□ -0.06
NFKB1-201ENST00000226574 BARGINQ6ZT62 677 aa14.71□□□□□ -0.06
NFKB1-201ENST00000226574 FAM20AQ96MK3 541 aa14.71□□□□□ -0.06
NFKB1-201ENST00000226574 SMYD2Q9NRG4 433 aa14.71□□□□□ -0.06
NFKB1-201ENST00000226574 KCND1Q9NSA2 647 aa14.71□□□□□ -0.06
NFKB1-201ENST00000226574 SCP2P22307 547 aa14.7□□□□□ -0.06
NFKB1-201ENST00000226574 PHLDB3Q6NSJ2 640 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms