RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-223ENST00000637823 NFIL3Q16649 462 aa12.95□□□□□ -0.34
CLN6-223ENST00000637823 FSCN1Q16658 493 aaKnown RBP12.95□□□□□ -0.34
CLN6-223ENST00000637823 FILIP1LQ4L180 1135 aa12.95□□□□□ -0.34
CLN6-223ENST00000637823 MAP3K21Q5TCX8 1036 aa12.95□□□□□ -0.34
CLN6-223ENST00000637823 FILIP1Q7Z7B0 1213 aa12.95□□□□□ -0.34
CLN6-223ENST00000637823 ZC3H3Q8IXZ2 948 aaKnown RBP12.95□□□□□ -0.34
CLN6-223ENST00000637823 SYCP3Q8IZU3 236 aa12.95□□□□□ -0.34
CLN6-223ENST00000637823 RETREG2Q8NC44 543 aa12.95□□□□□ -0.34
CLN6-223ENST00000637823 TMEM161BQ8NDZ6 487 aa12.95□□□□□ -0.34
CLN6-223ENST00000637823 GOLGA5Q8TBA6 731 aa12.95□□□□□ -0.34
CLN6-223ENST00000637823 BSNDQ8WZ55 320 aa12.95□□□□□ -0.34
CLN6-223ENST00000637823 KCNN1Q92952 543 aa12.95□□□□□ -0.34
CLN6-223ENST00000637823 LENG1Q96BZ8 264 aaPredicted RBP12.95□□□□□ -0.34
CLN6-223ENST00000637823 XPO4Q9C0E2 1151 aaKnown RBP12.95□□□□□ -0.34
CLN6-223ENST00000637823 CGNQ9P2M7 1197 aaKnown RBP12.95□□□□□ -0.34
CLN6-223ENST00000637823 EXOC7Q9UPT5 735 aa12.95□□□□□ -0.34
CLN6-223ENST00000637823 CETN3O15182 167 aa12.94□□□□□ -0.34
CLN6-223ENST00000637823 ASAP2O43150 1006 aa12.94□□□□□ -0.34
CLN6-223ENST00000637823 TGFB1I1O43294 461 aa12.94□□□□□ -0.34
CLN6-223ENST00000637823 ZEB2O60315 1214 aa12.94□□□□□ -0.34
CLN6-223ENST00000637823 GNA14O95837 355 aa12.94□□□□□ -0.34
CLN6-223ENST00000637823 F2P00734 622 aa12.94□□□□□ -0.34
CLN6-223ENST00000637823 MYL3P08590 195 aa12.94□□□□□ -0.34
CLN6-223ENST00000637823 RARBP10826 455 aa12.94□□□□□ -0.34
CLN6-223ENST00000637823 PRKAR2AP13861 404 aaKnown RBP12.94□□□□□ -0.34
CLN6-223ENST00000637823 GLRA2P23416 452 aa12.94□□□□□ -0.34
CLN6-223ENST00000637823 KLRC1P26715 233 aa12.94□□□□□ -0.34
CLN6-223ENST00000637823 NAMPTP43490 491 aa12.94□□□□□ -0.34
CLN6-223ENST00000637823 PSEN2P49810 448 aa12.94□□□□□ -0.34
CLN6-223ENST00000637823 C1QTNF8P60827 252 aa12.94□□□□□ -0.34
CLN6-223ENST00000637823 KCNA1Q09470 495 aa12.94□□□□□ -0.34
CLN6-223ENST00000637823 EFCAB12Q6NXP0 572 aa12.94□□□□□ -0.34
CLN6-223ENST00000637823 HS2ST1Q7LGA3 356 aa12.94□□□□□ -0.34
CLN6-223ENST00000637823 SLAIN1Q8ND83 568 aa12.94□□□□□ -0.34
CLN6-223ENST00000637823 ASAP3Q8TDY4 903 aa12.94□□□□□ -0.34
CLN6-223ENST00000637823 TRAPPC12Q8WVT3 735 aa12.94□□□□□ -0.34
CLN6-223ENST00000637823 PRPF31Q8WWY3 499 aaKnown RBP12.94□□□□□ -0.34
CLN6-223ENST00000637823 PSPC1Q8WXF1 523 aaKnown RBP12.94□□□□□ -0.34
CLN6-223ENST00000637823 KAT2BQ92831 832 aa12.94□□□□□ -0.34
CLN6-223ENST00000637823 NAP1L5Q96NT1 182 aaPredicted RBP12.94□□□□□ -0.34
CLN6-223ENST00000637823 KATNAL1Q9BW62 490 aa12.94□□□□□ -0.34
CLN6-223ENST00000637823 GBP3Q9H0R5 595 aa12.94□□□□□ -0.34
CLN6-223ENST00000637823 SUGCTQ9HAC7 445 aa12.94□□□□□ -0.34
CLN6-223ENST00000637823 TBX20Q9UMR3 447 aa12.94□□□□□ -0.34
CLN6-223ENST00000637823 A0A1B0GTH6 734 aa12.93□□□□□ -0.34
CLN6-223ENST00000637823 DENND3A2RUS2 1198 aa12.93□□□□□ -0.34
CLN6-223ENST00000637823 HAS3O00219 553 aa12.93□□□□□ -0.34
CLN6-223ENST00000637823 C22orf31O95567 290 aa12.93□□□□□ -0.34
CLN6-223ENST00000637823 TPM2P07951 284 aa12.93□□□□□ -0.34
CLN6-223ENST00000637823 C6orf222P0C671 652 aaPredicted RBP12.93□□□□□ -0.34
CLN6-223ENST00000637823 TMOD1P28289 359 aa12.93□□□□□ -0.34
CLN6-223ENST00000637823 CCND3P30281 292 aaPredicted RBP12.93□□□□□ -0.34
CLN6-223ENST00000637823 COPB1P53618 953 aaKnown RBP12.93□□□□□ -0.34
CLN6-223ENST00000637823 IGBP1P78318 339 aa12.93□□□□□ -0.34
CLN6-223ENST00000637823 BEX3Q00994 111 aa12.93□□□□□ -0.34
CLN6-223ENST00000637823 PPFIA1Q13136 1202 aa12.93□□□□□ -0.34
CLN6-223ENST00000637823 MKRN4PQ13434 485 aaPredicted RBP12.93□□□□□ -0.34
CLN6-223ENST00000637823 ADAM9Q13443 819 aa12.93□□□□□ -0.34
CLN6-223ENST00000637823 MYBPC2Q14324 1141 aa12.93□□□□□ -0.34
CLN6-223ENST00000637823 MFSD10Q14728 455 aa12.93□□□□□ -0.34
CLN6-223ENST00000637823 NR1I3Q14994 352 aa12.93□□□□□ -0.34
CLN6-223ENST00000637823 KRT31Q15323 416 aa12.93□□□□□ -0.34
CLN6-223ENST00000637823 GRIK4Q16099 956 aa12.93□□□□□ -0.34
CLN6-223ENST00000637823 KIAA0753Q2KHM9 967 aa12.93□□□□□ -0.34
CLN6-223ENST00000637823 GNASQ5JWF2 1037 aa12.93□□□□□ -0.34
CLN6-223ENST00000637823 LRRC55Q6ZSA7 311 aa12.93□□□□□ -0.34
CLN6-223ENST00000637823 APTXQ7Z2E3 356 aaKnown RBP12.93□□□□□ -0.34
CLN6-223ENST00000637823 CREBRFQ8IUR6 639 aa12.93□□□□□ -0.34
CLN6-223ENST00000637823 KSR1Q8IVT5 923 aa12.93□□□□□ -0.34
CLN6-223ENST00000637823 DRC7Q8IY82 874 aa12.93□□□□□ -0.34
CLN6-223ENST00000637823 DEPTORQ8TB45 409 aa12.93□□□□□ -0.34
CLN6-223ENST00000637823 TMEM174Q8WUU8 243 aa12.93□□□□□ -0.34
CLN6-223ENST00000637823 CNOT6LQ96LI5 555 aaKnown RBP12.93□□□□□ -0.34
CLN6-223ENST00000637823 TMEM134Q9H6X4 195 aa12.93□□□□□ -0.34
CLN6-223ENST00000637823 WBP1LQ9NX94 342 aa12.93□□□□□ -0.34
CLN6-223ENST00000637823 ARHGAP28Q9P2N2 729 aa12.93□□□□□ -0.34
CLN6-223ENST00000637823 SUCLA2Q9P2R7 463 aaPredicted RBP12.93□□□□□ -0.34
CLN6-223ENST00000637823 ZMYM2Q9UBW7 1377 aa12.93□□□□□ -0.34
CLN6-223ENST00000637823 SCN10AQ9Y5Y9 1956 aa12.92□□□□□ -0.34
CLN6-223ENST00000637823 NRCAMQ92823 1304 aa12.92□□□□□ -0.34
CLN6-223ENST00000637823 LRRIQ4A6NIV6 560 aa12.92□□□□□ -0.34
CLN6-223ENST00000637823 NR3C1P04150 777 aa12.92□□□□□ -0.34
CLN6-223ENST00000637823 NR2F2P24468 414 aa12.92□□□□□ -0.34
CLN6-223ENST00000637823 MTIF2P46199 727 aaKnown RBP12.92□□□□□ -0.34
CLN6-223ENST00000637823 EFNA5P52803 228 aa12.92□□□□□ -0.34
CLN6-223ENST00000637823 PURAQ00577 322 aaKnown RBP12.92□□□□□ -0.34
CLN6-223ENST00000637823 LAMTOR4Q0VGL1 99 aa12.92□□□□□ -0.34
CLN6-223ENST00000637823 TFDP1Q14186 410 aa12.92□□□□□ -0.34
CLN6-223ENST00000637823 MTHFD1LQ6UB35 978 aa12.92□□□□□ -0.34
CLN6-223ENST00000637823 SLC9A9Q8IVB4 645 aa12.92□□□□□ -0.34
CLN6-223ENST00000637823 MAP4K3Q8IVH8 894 aa12.92□□□□□ -0.34
CLN6-223ENST00000637823 LRRC71Q8N4P6 559 aa12.92□□□□□ -0.34
CLN6-223ENST00000637823 METTL13Q8N6R0 699 aa12.92□□□□□ -0.34
CLN6-223ENST00000637823 LINC01465Q8N7H1 131 aa12.92□□□□□ -0.34
CLN6-223ENST00000637823 TUBGCP2Q9BSJ2 902 aa12.92□□□□□ -0.34
CLN6-223ENST00000637823 MTG1Q9BT17 334 aaPredicted RBP12.92□□□□□ -0.34
CLN6-223ENST00000637823 RTN4Q9NQC3 1192 aaKnown RBP12.92□□□□□ -0.34
CLN6-223ENST00000637823 DMAC2Q9NW81 257 aa12.92□□□□□ -0.34
CLN6-223ENST00000637823 PHLPP2Q6ZVD8 1323 aa12.91□□□□□ -0.34
CLN6-223ENST00000637823 GOLGA6L6A8MZA4 724 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms