RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 PANK2Q9BZ23 570 aa16.34■□□□□ 0.21
PNKP-221ENST00000627317 PRDM12Q9H4Q4 367 aa16.34■□□□□ 0.21
PNKP-221ENST00000627317 EVPLQ92817 2033 aa16.34■□□□□ 0.21
PNKP-221ENST00000627317 IGKV6-21A0A0C4DH24 114 aa16.33■□□□□ 0.2
PNKP-221ENST00000627317 A0A1W2PQ27 194 aa16.33■□□□□ 0.2
PNKP-221ENST00000627317 A0A1W2PQ64 194 aa16.33■□□□□ 0.2
PNKP-221ENST00000627317 A0A1W2PQD8 194 aa16.33■□□□□ 0.2
PNKP-221ENST00000627317 GHRP10912 638 aa16.33■□□□□ 0.2
PNKP-221ENST00000627317 DHX8Q14562 1220 aaKnown RBP16.33■□□□□ 0.2
PNKP-221ENST00000627317 SPRED2Q7Z698 418 aa16.33■□□□□ 0.2
PNKP-221ENST00000627317 KIAA0319LQ8IZA0 1049 aa16.33■□□□□ 0.2
PNKP-221ENST00000627317 NME8Q8N427 588 aa16.33■□□□□ 0.2
PNKP-221ENST00000627317 LINC01465Q8N7H1 131 aa16.33■□□□□ 0.2
PNKP-221ENST00000627317 MCPH1Q8NEM0 835 aa16.33■□□□□ 0.2
PNKP-221ENST00000627317 MAFAQ8NHW3 353 aaPredicted RBP16.33■□□□□ 0.2
PNKP-221ENST00000627317 TCP11Q8WWU5 503 aa16.33■□□□□ 0.2
PNKP-221ENST00000627317 MRPS27Q92552 414 aaKnown RBP16.33■□□□□ 0.2
PNKP-221ENST00000627317 LARP4BQ92615 738 aaKnown RBP16.33■□□□□ 0.2
PNKP-221ENST00000627317 APBB2Q92870 758 aa16.33■□□□□ 0.2
PNKP-221ENST00000627317 GBP4Q96PP9 640 aa16.33■□□□□ 0.2
PNKP-221ENST00000627317 PYM1Q9BRP8 204 aaKnown RBP16.33■□□□□ 0.2
PNKP-221ENST00000627317 IFIH1Q9BYX4 1025 aaKnown RBP16.33■□□□□ 0.2
PNKP-221ENST00000627317 AGO3Q9H9G7 860 aaKnown RBP16.33■□□□□ 0.2
PNKP-221ENST00000627317 CDY2AQ9Y6F7 541 aa16.33■□□□□ 0.2
PNKP-221ENST00000627317 VCANP13611 3396 aa16.33■□□□□ 0.2
PNKP-221ENST00000627317 A0A087X0B3 334 aa16.32■□□□□ 0.2
PNKP-221ENST00000627317 EPOPA6NHQ4 379 aa16.32■□□□□ 0.2
PNKP-221ENST00000627317 TLL1O43897 1013 aa16.32■□□□□ 0.2
PNKP-221ENST00000627317 VTNP04004 478 aa16.32■□□□□ 0.2
PNKP-221ENST00000627317 PFKFB1P16118 471 aa16.32■□□□□ 0.2
PNKP-221ENST00000627317 CYP11B2P19099 503 aa16.32■□□□□ 0.2
PNKP-221ENST00000627317 SLC12A3P55017 1021 aa16.32■□□□□ 0.2
PNKP-221ENST00000627317 HTRA4P83105 476 aaPredicted RBP16.32■□□□□ 0.2
PNKP-221ENST00000627317 TMEM62Q0P6H9 643 aa16.32■□□□□ 0.2
PNKP-221ENST00000627317 MCM6Q14566 821 aa16.32■□□□□ 0.2
PNKP-221ENST00000627317 IER5Q5VY09 327 aa16.32■□□□□ 0.2
PNKP-221ENST00000627317 TSHZ1Q6ZSZ6 1077 aa16.32■□□□□ 0.2
PNKP-221ENST00000627317 MAEAQ7L5Y9 396 aa16.32■□□□□ 0.2
PNKP-221ENST00000627317 GPBP1Q86WP2 473 aa16.32■□□□□ 0.2
PNKP-221ENST00000627317 SYT2Q8N9I0 419 aaPredicted RBP16.32■□□□□ 0.2
PNKP-221ENST00000627317 IQUBQ8NA54 791 aa16.32■□□□□ 0.2
PNKP-221ENST00000627317 LRRC15Q8TF66 581 aa16.32■□□□□ 0.2
PNKP-221ENST00000627317 PSPC1Q8WXF1 523 aaKnown RBP16.32■□□□□ 0.2
PNKP-221ENST00000627317 TMEM143Q96AN5 459 aa16.32■□□□□ 0.2
PNKP-221ENST00000627317 DHX58Q96C10 678 aa16.32■□□□□ 0.2
PNKP-221ENST00000627317 SCLT1Q96NL6 688 aa16.32■□□□□ 0.2
PNKP-221ENST00000627317 XPNPEP1Q9NQW7 623 aa16.32■□□□□ 0.2
PNKP-221ENST00000627317 SPTBN5Q9NRC6 3674 aaKnown RBP16.32■□□□□ 0.2
PNKP-221ENST00000627317 BLOC1S4Q9NUP1 217 aa16.32■□□□□ 0.2
PNKP-221ENST00000627317 SUCLA2Q9P2R7 463 aaPredicted RBP16.32■□□□□ 0.2
PNKP-221ENST00000627317 KCNH3Q9ULD8 1083 aa16.32■□□□□ 0.2
PNKP-221ENST00000627317 MICAL3Q7RTP6 2002 aa16.31■□□□□ 0.2
PNKP-221ENST00000627317 A0A1B0GVL5 298 aa16.31■□□□□ 0.2
PNKP-221ENST00000627317 POLR2DO15514 142 aaKnown RBP16.31■□□□□ 0.2
PNKP-221ENST00000627317 DRP2Q13474 957 aa16.31■□□□□ 0.2
PNKP-221ENST00000627317 FAM102BQ5T8I3 360 aa16.31■□□□□ 0.2
PNKP-221ENST00000627317 TMEM87AQ8NBN3 555 aa16.31■□□□□ 0.2
PNKP-221ENST00000627317 SP7Q8TDD2 431 aaPredicted RBP16.31■□□□□ 0.2
PNKP-221ENST00000627317 LINC01599Q8WXQ3 324 aa16.31■□□□□ 0.2
PNKP-221ENST00000627317 PPP1R16BQ96T49 567 aa16.31■□□□□ 0.2
PNKP-221ENST00000627317 RAD9AQ99638 391 aa16.31■□□□□ 0.2
PNKP-221ENST00000627317 RUSC1Q9BVN2 902 aa16.31■□□□□ 0.2
PNKP-221ENST00000627317 POLR3FQ9H1D9 316 aaPredicted RBP16.31■□□□□ 0.2
PNKP-221ENST00000627317 CUEDC2Q9H467 287 aa16.31■□□□□ 0.2
PNKP-221ENST00000627317 KCND2Q9NZV8 630 aa16.31■□□□□ 0.2
PNKP-221ENST00000627317 GINS2Q9Y248 185 aa16.31■□□□□ 0.2
PNKP-221ENST00000627317 TRPV2Q9Y5S1 764 aa16.31■□□□□ 0.2
PNKP-221ENST00000627317 SQORQ9Y6N5 450 aa16.31■□□□□ 0.2
PNKP-221ENST00000627317 XIRP2A4UGR9 3374 aa16.3■□□□□ 0.2
PNKP-221ENST00000627317 AMHP03971 560 aa16.3■□□□□ 0.2
PNKP-221ENST00000627317 KRT18P05783 430 aaKnown RBP16.3■□□□□ 0.2
PNKP-221ENST00000627317 SYKP43405 635 aa16.3■□□□□ 0.2
PNKP-221ENST00000627317 KIZQ2M2Z5 673 aa16.3■□□□□ 0.2
PNKP-221ENST00000627317 NAALADL2Q58DX5 795 aa16.3■□□□□ 0.2
PNKP-221ENST00000627317 RINT1Q6NUQ1 792 aa16.3■□□□□ 0.2
PNKP-221ENST00000627317 SV2BQ7L1I2 683 aa16.3■□□□□ 0.2
PNKP-221ENST00000627317 RHPN2Q8IUC4 686 aa16.3■□□□□ 0.2
PNKP-221ENST00000627317 CRIPAKQ8N1N5 446 aa16.3■□□□□ 0.2
PNKP-221ENST00000627317 ZNF710Q8N1W2 664 aa16.3■□□□□ 0.2
PNKP-221ENST00000627317 USP38Q8NB14 1042 aa16.3■□□□□ 0.2
PNKP-221ENST00000627317 TOP1MTQ969P6 601 aa16.3■□□□□ 0.2
PNKP-221ENST00000627317 TIPINQ9BVW5 301 aa16.3■□□□□ 0.2
PNKP-221ENST00000627317 CELF4Q9BZC1 486 aaKnown RBP16.3■□□□□ 0.2
PNKP-221ENST00000627317 GPRC5CQ9NQ84 441 aa16.3■□□□□ 0.2
PNKP-221ENST00000627317 COL4A3BPQ9Y5P4 624 aa16.3■□□□□ 0.2
PNKP-221ENST00000627317 NDUFA8P51970 172 aa16.29■□□□□ 0.2
PNKP-221ENST00000627317 NLRP11P59045 1033 aaKnown RBP16.29■□□□□ 0.2
PNKP-221ENST00000627317 CDC42EP1Q00587 391 aa16.29■□□□□ 0.2
PNKP-221ENST00000627317 RAD51AP2Q09MP3 1159 aa16.29■□□□□ 0.2
PNKP-221ENST00000627317 MXD4Q14582 209 aaPredicted RBP16.29■□□□□ 0.2
PNKP-221ENST00000627317 E2F4Q16254 413 aa16.29■□□□□ 0.2
PNKP-221ENST00000627317 CLEC17AQ6ZS10 378 aa16.29■□□□□ 0.2
PNKP-221ENST00000627317 C1orf186Q6ZWK4 172 aa16.29■□□□□ 0.2
PNKP-221ENST00000627317 CEP57L1Q8IYX8 460 aa16.29■□□□□ 0.2
PNKP-221ENST00000627317 MYOCDQ8IZQ8 938 aa16.29■□□□□ 0.2
PNKP-221ENST00000627317 TMEM40Q8WWA1 233 aa16.29■□□□□ 0.2
PNKP-221ENST00000627317 PRPF31Q8WWY3 499 aaKnown RBP16.29■□□□□ 0.2
PNKP-221ENST00000627317 NLRP7Q8WX94 980 aa16.29■□□□□ 0.2
PNKP-221ENST00000627317 KIFAP3Q92845 792 aa16.29■□□□□ 0.2
PNKP-221ENST00000627317 ZNF668Q96K58 619 aaPredicted RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms