RNA–Protein interactions for RNA: ENST00000625286.1

DDX41-218, Transcript of DEAD-box helicase 41, humanhuman

TSL 5 BASIC

Gene DDX41, Length 150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-218ENST00000625286 KRT17Q04695 432 aa12.47□□□□□ -0.41
DDX41-218ENST00000625286 KSR1Q8IVT5 923 aa12.47□□□□□ -0.41
DDX41-218ENST00000625286 SLC22A17Q8WUG5 538 aa12.47□□□□□ -0.41
DDX41-218ENST00000625286 FAM167AQ96KS9 214 aa12.47□□□□□ -0.41
DDX41-218ENST00000625286 MAP7D2Q96T17 732 aa12.47□□□□□ -0.41
DDX41-218ENST00000625286 RIT2Q99578 217 aa12.47□□□□□ -0.41
DDX41-218ENST00000625286 NIFKQ9BYG3 293 aaKnown RBP12.47□□□□□ -0.41
DDX41-218ENST00000625286 NCOA5Q9HCD5 579 aaKnown RBP12.47□□□□□ -0.41
DDX41-218ENST00000625286 TSHZ2Q9NRE2 1034 aa12.47□□□□□ -0.41
DDX41-218ENST00000625286 NRBP2Q9NSY0 501 aa12.47□□□□□ -0.41
DDX41-218ENST00000625286 DCHS1Q96JQ0 3298 aa12.47□□□□□ -0.41
DDX41-218ENST00000625286 FAM186AA6NE01 2351 aa12.46□□□□□ -0.41
DDX41-218ENST00000625286 A0A087WZ62 844 aa12.46□□□□□ -0.41
DDX41-218ENST00000625286 FSD2A1L4K1 749 aa12.46□□□□□ -0.41
DDX41-218ENST00000625286 H0Y858 1186 aa12.46□□□□□ -0.41
DDX41-218ENST00000625286 M0R2N6 131 aa12.46□□□□□ -0.41
DDX41-218ENST00000625286 TDP2O95551 362 aa12.46□□□□□ -0.41
DDX41-218ENST00000625286 ASGR2P07307 311 aa12.46□□□□□ -0.41
DDX41-218ENST00000625286 EPCAMP16422 314 aa12.46□□□□□ -0.41
DDX41-218ENST00000625286 TMOD1P28289 359 aa12.46□□□□□ -0.41
DDX41-218ENST00000625286 GNA11P29992 359 aa12.46□□□□□ -0.41
DDX41-218ENST00000625286 PDIA3P30101 505 aaKnown RBP12.46□□□□□ -0.41
DDX41-218ENST00000625286 HSPA4P34932 840 aa12.46□□□□□ -0.41
DDX41-218ENST00000625286 PPM1AP35813 382 aa12.46□□□□□ -0.41
DDX41-218ENST00000625286 PHKA2P46019 1235 aa12.46□□□□□ -0.41
DDX41-218ENST00000625286 USP11P51784 963 aa12.46□□□□□ -0.41
DDX41-218ENST00000625286 KRT32Q14532 448 aa12.46□□□□□ -0.41
DDX41-218ENST00000625286 SMC1AQ14683 1233 aaKnown RBP12.46□□□□□ -0.41
DDX41-218ENST00000625286 NPY5RQ15761 445 aa12.46□□□□□ -0.41
DDX41-218ENST00000625286 MCTP2Q6DN12 878 aa12.46□□□□□ -0.41
DDX41-218ENST00000625286 ZNF280BQ86YH2 543 aa12.46□□□□□ -0.41
DDX41-218ENST00000625286 ABI1Q8IZP0 508 aa12.46□□□□□ -0.41
DDX41-218ENST00000625286 VPS52Q8N1B4 723 aa12.46□□□□□ -0.41
DDX41-218ENST00000625286 FBXL16Q8N461 479 aa12.46□□□□□ -0.41
DDX41-218ENST00000625286 TMEM105Q8N8V8 129 aa12.46□□□□□ -0.41
DDX41-218ENST00000625286 ZNF579Q8NAF0 562 aaKnown RBP12.46□□□□□ -0.41
DDX41-218ENST00000625286 NLRP7Q8WX94 980 aa12.46□□□□□ -0.41
DDX41-218ENST00000625286 CASP10Q92851 521 aa12.46□□□□□ -0.41
DDX41-218ENST00000625286 JAKMIP1Q96N16 626 aaKnown RBP12.46□□□□□ -0.41
DDX41-218ENST00000625286 FDXACB1Q9BRP7 624 aaPredicted RBP12.46□□□□□ -0.41
DDX41-218ENST00000625286 SLC26A6Q9BXS9 759 aa12.46□□□□□ -0.41
DDX41-218ENST00000625286 ZBP1Q9H171 429 aa12.46□□□□□ -0.41
DDX41-218ENST00000625286 NRDE2Q9H7Z3 1164 aa12.46□□□□□ -0.41
DDX41-218ENST00000625286 CCDC196A0A1B0GTZ2 297 aa12.45□□□□□ -0.42
DDX41-218ENST00000625286 OFD1O75665 1012 aa12.45□□□□□ -0.42
DDX41-218ENST00000625286 GALTP07902 379 aa12.45□□□□□ -0.42
DDX41-218ENST00000625286 HMGB1P09429 215 aaKnown RBP12.45□□□□□ -0.42
DDX41-218ENST00000625286 IFNAR1P17181 557 aa12.45□□□□□ -0.42
DDX41-218ENST00000625286 EVCP57679 992 aa12.45□□□□□ -0.42
DDX41-218ENST00000625286 CCT2P78371 535 aaKnown RBP12.45□□□□□ -0.42
DDX41-218ENST00000625286 ITIH3Q06033 890 aa12.45□□□□□ -0.42
DDX41-218ENST00000625286 TBC1D8BQ0IIM8 1120 aa12.45□□□□□ -0.42
DDX41-218ENST00000625286 MTERF2Q49AM1 385 aa12.45□□□□□ -0.42
DDX41-218ENST00000625286 Q4G0T1 1027 aa12.45□□□□□ -0.42
DDX41-218ENST00000625286 RARS2Q5T160 578 aaKnown RBP12.45□□□□□ -0.42
DDX41-218ENST00000625286 LRCH2Q5VUJ6 765 aa12.45□□□□□ -0.42
DDX41-218ENST00000625286 ANO5Q75V66 913 aa12.45□□□□□ -0.42
DDX41-218ENST00000625286 TBCKQ8TEA7 893 aa12.45□□□□□ -0.42
DDX41-218ENST00000625286 IGSF21Q96ID5 467 aa12.45□□□□□ -0.42
DDX41-218ENST00000625286 PRRX2Q99811 253 aa12.45□□□□□ -0.42
DDX41-218ENST00000625286 TRAIPQ9BWF2 469 aa12.45□□□□□ -0.42
DDX41-218ENST00000625286 TBC1D13Q9NVG8 400 aa12.45□□□□□ -0.42
DDX41-218ENST00000625286 DNAJB4Q9UDY4 337 aa12.45□□□□□ -0.42
DDX41-218ENST00000625286 LIMD1Q9UGP4 676 aa12.45□□□□□ -0.42
DDX41-218ENST00000625286 C2orf16Q68DN1 1984 aa12.44□□□□□ -0.42
DDX41-218ENST00000625286 CYP3A7-CYP3A51PA0A087WV96 503 aa12.44□□□□□ -0.42
DDX41-218ENST00000625286 EML1O00423 815 aa12.44□□□□□ -0.42
DDX41-218ENST00000625286 ST18O60284 1047 aa12.44□□□□□ -0.42
DDX41-218ENST00000625286 GAS7O60861 476 aa12.44□□□□□ -0.42
DDX41-218ENST00000625286 CDC45O75419 566 aa12.44□□□□□ -0.42
DDX41-218ENST00000625286 SRGAP2BP0DMP2 458 aa12.44□□□□□ -0.42
DDX41-218ENST00000625286 RPS6KB1P23443 525 aa12.44□□□□□ -0.42
DDX41-218ENST00000625286 CYP3A7P24462 503 aa12.44□□□□□ -0.42
DDX41-218ENST00000625286 SLC11A1P49279 550 aa12.44□□□□□ -0.42
DDX41-218ENST00000625286 ALDH7A1P49419 539 aaKnown RBP12.44□□□□□ -0.42
DDX41-218ENST00000625286 FGD1P98174 961 aa12.44□□□□□ -0.42
DDX41-218ENST00000625286 TPRNQ4KMQ1 711 aa12.44□□□□□ -0.42
DDX41-218ENST00000625286 DDX53Q86TM3 631 aaKnown RBP12.44□□□□□ -0.42
DDX41-218ENST00000625286 ZNF710Q8N1W2 664 aa12.44□□□□□ -0.42
DDX41-218ENST00000625286 ETNPPLQ8TBG4 499 aa12.44□□□□□ -0.42
DDX41-218ENST00000625286 CCDC12Q8WUD4 166 aaPredicted RBP12.44□□□□□ -0.42
DDX41-218ENST00000625286 ATOH1Q92858 354 aaPredicted RBP12.44□□□□□ -0.42
DDX41-218ENST00000625286 MBOAT7Q96N66 472 aa12.44□□□□□ -0.42
DDX41-218ENST00000625286 AIFM3Q96NN9 605 aa12.44□□□□□ -0.42
DDX41-218ENST00000625286 TEKT3Q9BXF9 490 aa12.44□□□□□ -0.42
DDX41-218ENST00000625286 RNF26Q9BY78 433 aaPredicted RBP12.44□□□□□ -0.42
DDX41-218ENST00000625286 IFT122Q9HBG6 1241 aa12.44□□□□□ -0.42
DDX41-218ENST00000625286 CHST12Q9NRB3 414 aa12.44□□□□□ -0.42
DDX41-218ENST00000625286 WRAP73Q9P2S5 460 aaPredicted RBP12.44□□□□□ -0.42
DDX41-218ENST00000625286 SORCS3Q9UPU3 1222 aa12.44□□□□□ -0.42
DDX41-218ENST00000625286 IRAK3Q9Y616 596 aa12.44□□□□□ -0.42
DDX41-218ENST00000625286 DENND4AQ7Z401 1863 aa12.43□□□□□ -0.42
DDX41-218ENST00000625286 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.43□□□□□ -0.42
DDX41-218ENST00000625286 GALR2O43603 387 aaPredicted RBP12.43□□□□□ -0.42
DDX41-218ENST00000625286 GFRA3O60609 400 aa12.43□□□□□ -0.42
DDX41-218ENST00000625286 DTNBO60941 627 aa12.43□□□□□ -0.42
DDX41-218ENST00000625286 LILRB3O75022 631 aa12.43□□□□□ -0.42
DDX41-218ENST00000625286 ZC3H11AO75152 810 aaKnown RBP eCLIP12.43□□□□□ -0.42
DDX41-218ENST00000625286 MAFO75444 373 aaPredicted RBP12.43□□□□□ -0.42
DDX41-218ENST00000625286 DDHD2O94830 711 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms