RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 CPSF2Q9P2I0 782 aaKnown RBP17.31■□□□□ 0.36
GABRB3-215ENST00000622697 RASA4BC9J798 803 aa17.31■□□□□ 0.36
GABRB3-215ENST00000622697 RASA4O43374 803 aa17.31■□□□□ 0.36
GABRB3-215ENST00000622697 MED7O43513 233 aa17.31■□□□□ 0.36
GABRB3-215ENST00000622697 SLC9A1P19634 815 aa17.31■□□□□ 0.36
GABRB3-215ENST00000622697 PPP2R2AP63151 447 aa17.31■□□□□ 0.36
GABRB3-215ENST00000622697 SNRNP48Q6IEG0 339 aaKnown RBP17.31■□□□□ 0.36
GABRB3-215ENST00000622697 HACE1Q8IYU2 909 aa17.31■□□□□ 0.36
GABRB3-215ENST00000622697 P4HBP07237 508 aaKnown RBP17.31■□□□□ 0.36
GABRB3-215ENST00000622697 PDHBP11177 359 aa17.31■□□□□ 0.36
GABRB3-215ENST00000622697 CCDC137Q6PK04 289 aaKnown RBP17.31■□□□□ 0.36
GABRB3-215ENST00000622697 CENPUQ71F23 418 aa17.31■□□□□ 0.36
GABRB3-215ENST00000622697 PDZD4Q76G19 769 aaPredicted RBP17.31■□□□□ 0.36
GABRB3-215ENST00000622697 ATP6V1G3Q96LB4 118 aa17.31■□□□□ 0.36
GABRB3-215ENST00000622697 ZNF277Q9NRM2 450 aaPredicted RBP17.31■□□□□ 0.36
GABRB3-215ENST00000622697 GRID2IPA4D2P6 1211 aa17.3■□□□□ 0.36
GABRB3-215ENST00000622697 JAK3P52333 1124 aa17.3■□□□□ 0.36
GABRB3-215ENST00000622697 PPP6R3Q5H9R7 873 aaPredicted RBP17.3■□□□□ 0.36
GABRB3-215ENST00000622697 NLRP14Q86W24 1093 aa17.3■□□□□ 0.36
GABRB3-215ENST00000622697 PDCD7Q8N8D1 485 aaKnown RBP17.3■□□□□ 0.36
GABRB3-215ENST00000622697 ATP6V0A4Q9HBG4 840 aa17.3■□□□□ 0.36
GABRB3-215ENST00000622697 OVOS2A0A0G2JMS6 1433 aa17.3■□□□□ 0.36
GABRB3-215ENST00000622697 GMNCA6NCL1 334 aa17.3■□□□□ 0.36
GABRB3-215ENST00000622697 CYP26A1O43174 497 aa17.3■□□□□ 0.36
GABRB3-215ENST00000622697 SART1O43290 800 aaKnown RBP17.3■□□□□ 0.36
GABRB3-215ENST00000622697 MAML1Q92585 1016 aa17.3■□□□□ 0.36
GABRB3-215ENST00000622697 ACTR5Q9H9F9 607 aaPredicted RBP17.3■□□□□ 0.36
GABRB3-215ENST00000622697 RPF1Q9H9Y2 349 aaKnown RBP17.3■□□□□ 0.36
GABRB3-215ENST00000622697 DIS3Q9Y2L1 958 aaKnown RBP17.3■□□□□ 0.36
GABRB3-215ENST00000622697 ZBTB22O15209 634 aa17.3■□□□□ 0.36
GABRB3-215ENST00000622697 CLDN3O15551 220 aa17.3■□□□□ 0.36
GABRB3-215ENST00000622697 GSTA1P08263 222 aa17.3■□□□□ 0.36
GABRB3-215ENST00000622697 GSTA2P09210 222 aa17.3■□□□□ 0.36
GABRB3-215ENST00000622697 SLC18A3Q16572 532 aa17.3■□□□□ 0.36
GABRB3-215ENST00000622697 FEM1BQ9UK73 627 aa17.3■□□□□ 0.36
GABRB3-215ENST00000622697 NUB1Q9Y5A7 615 aa17.3■□□□□ 0.36
GABRB3-215ENST00000622697 ZHX2Q9Y6X8 837 aa17.3■□□□□ 0.36
GABRB3-215ENST00000622697 TARSL2A2RTX5 802 aaKnown RBP17.3■□□□□ 0.36
GABRB3-215ENST00000622697 FGFR4P22455 802 aa17.3■□□□□ 0.36
GABRB3-215ENST00000622697 ERVK-24P63145 666 aa17.3■□□□□ 0.36
GABRB3-215ENST00000622697 RBM43Q6ZSC3 357 aaKnown RBP17.3■□□□□ 0.36
GABRB3-215ENST00000622697 FRMD5Q7Z6J6 570 aa17.3■□□□□ 0.36
GABRB3-215ENST00000622697 OR2W6PQ8NHA6 318 aa17.3■□□□□ 0.36
GABRB3-215ENST00000622697 RNPC3Q96LT9 517 aaKnown RBP17.3■□□□□ 0.36
GABRB3-215ENST00000622697 TRIM51Q9BSJ1 452 aa17.3■□□□□ 0.36
GABRB3-215ENST00000622697 FIS1Q9Y3D6 152 aa17.3■□□□□ 0.36
GABRB3-215ENST00000622697 ZC2HC1CQ53FD0 456 aaPredicted RBP17.29■□□□□ 0.36
GABRB3-215ENST00000622697 FBXO33Q7Z6M2 555 aa17.29■□□□□ 0.36
GABRB3-215ENST00000622697 MCUQ8NE86 351 aa17.29■□□□□ 0.36
GABRB3-215ENST00000622697 MIPOL1Q8TD10 442 aa17.29■□□□□ 0.36
GABRB3-215ENST00000622697 ADAM33Q9BZ11 813 aa17.29■□□□□ 0.36
GABRB3-215ENST00000622697 SNX25Q9H3E2 840 aa17.29■□□□□ 0.36
GABRB3-215ENST00000622697 FHOD1Q9Y613 1164 aa17.29■□□□□ 0.36
GABRB3-215ENST00000622697 PDIK1LQ8N165 341 aa17.29■□□□□ 0.36
GABRB3-215ENST00000622697 MYCBPQ99417 103 aaPredicted RBP17.29■□□□□ 0.36
GABRB3-215ENST00000622697 PCSK1NQ9UHG2 260 aa17.29■□□□□ 0.36
GABRB3-215ENST00000622697 TTI1O43156 1089 aa17.29■□□□□ 0.36
GABRB3-215ENST00000622697 GARSP41250 739 aaKnown RBP17.29■□□□□ 0.36
GABRB3-215ENST00000622697 SPP2Q13103 211 aa17.29■□□□□ 0.36
GABRB3-215ENST00000622697 TTC17Q96AE7 1141 aa17.29■□□□□ 0.36
GABRB3-215ENST00000622697 SCAF8Q9UPN6 1271 aaKnown RBP17.29■□□□□ 0.36
GABRB3-215ENST00000622697 SCINQ9Y6U3 715 aa17.29■□□□□ 0.36
GABRB3-215ENST00000622697 A0A0G2JND7 137 aa17.29■□□□□ 0.36
GABRB3-215ENST00000622697 F5H423 210 aaPredicted RBP17.29■□□□□ 0.36
GABRB3-215ENST00000622697 TJP3O95049 919 aa17.29■□□□□ 0.36
GABRB3-215ENST00000622697 CCNI2Q6ZMN8 369 aaPredicted RBP17.29■□□□□ 0.36
GABRB3-215ENST00000622697 RFFLQ8WZ73 363 aa17.29■□□□□ 0.36
GABRB3-215ENST00000622697 IFT122Q9HBG6 1241 aa17.29■□□□□ 0.36
GABRB3-215ENST00000622697 MAD2L2Q9UI95 211 aa17.29■□□□□ 0.36
GABRB3-215ENST00000622697 DUSP10Q9Y6W6 482 aa17.29■□□□□ 0.36
GABRB3-215ENST00000622697 EYA4O95677 639 aa17.29■□□□□ 0.36
GABRB3-215ENST00000622697 UCHL3P15374 230 aa17.29■□□□□ 0.36
GABRB3-215ENST00000622697 SLC30A5Q8TAD4 765 aa17.29■□□□□ 0.36
GABRB3-215ENST00000622697 RNF146Q9NTX7 359 aa17.29■□□□□ 0.36
GABRB3-215ENST00000622697 SMAD1Q15797 465 aaKnown RBP17.28■□□□□ 0.36
GABRB3-215ENST00000622697 HAUS6Q7Z4H7 955 aa17.28■□□□□ 0.36
GABRB3-215ENST00000622697 TRIM59Q8IWR1 403 aa17.28■□□□□ 0.36
GABRB3-215ENST00000622697 HPSEQ9Y251 543 aa17.28■□□□□ 0.36
GABRB3-215ENST00000622697 USP32Q8NFA0 1604 aa17.28■□□□□ 0.36
GABRB3-215ENST00000622697 CYP2C19P33261 490 aa17.28■□□□□ 0.36
GABRB3-215ENST00000622697 PRR5LQ6MZQ0 368 aa17.28■□□□□ 0.36
GABRB3-215ENST00000622697 TBC1D22BQ9NU19 505 aa17.28■□□□□ 0.36
GABRB3-215ENST00000622697 ZBED1O96006 694 aa17.28■□□□□ 0.36
GABRB3-215ENST00000622697 SLFN12LQ6IEE8 588 aa17.28■□□□□ 0.36
GABRB3-215ENST00000622697 ADGRA1Q86SQ6 560 aa17.28■□□□□ 0.36
GABRB3-215ENST00000622697 LDHDQ86WU2 507 aa17.28■□□□□ 0.36
GABRB3-215ENST00000622697 CCHCR1Q8TD31 782 aa17.28■□□□□ 0.36
GABRB3-215ENST00000622697 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.28■□□□□ 0.36
GABRB3-215ENST00000622697 GGT7Q9UJ14 662 aa17.28■□□□□ 0.36
GABRB3-215ENST00000622697 DEPDC5O75140 1603 aa17.28■□□□□ 0.36
GABRB3-215ENST00000622697 PDXKO00764 312 aa17.28■□□□□ 0.36
GABRB3-215ENST00000622697 GALCP54803 685 aa17.28■□□□□ 0.36
GABRB3-215ENST00000622697 C16orf86Q6ZW13 317 aa17.28■□□□□ 0.36
GABRB3-215ENST00000622697 SLC35G2Q8TBE7 412 aa17.28■□□□□ 0.36
GABRB3-215ENST00000622697 CHORDC1Q9UHD1 332 aaPredicted RBP17.28■□□□□ 0.36
GABRB3-215ENST00000622697 KRT14P02533 472 aa17.27■□□□□ 0.36
GABRB3-215ENST00000622697 SUPT20HL1Q3ZLR7 823 aa17.27■□□□□ 0.36
GABRB3-215ENST00000622697 KRT39Q6A163 491 aa17.27■□□□□ 0.36
GABRB3-215ENST00000622697 FAF2Q96CS3 445 aa17.27■□□□□ 0.36
GABRB3-215ENST00000622697 PNKPQ96T60 521 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms