RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 UCMAQ8WVF2 138 aa8.08□□□□□ -1.12
TRIM49B-202ENST00000622138 INPP5DQ92835 1189 aa8.08□□□□□ -1.12
TRIM49B-202ENST00000622138 DHTKD1Q96HY7 919 aaPredicted RBP8.08□□□□□ -1.12
TRIM49B-202ENST00000622138 TRAIPQ9BWF2 469 aa8.08□□□□□ -1.12
TRIM49B-202ENST00000622138 NRDE2Q9H7Z3 1164 aa8.08□□□□□ -1.12
TRIM49B-202ENST00000622138 DCLRE1BQ9H816 532 aa8.08□□□□□ -1.12
TRIM49B-202ENST00000622138 NHEJ1Q9H9Q4 299 aaPredicted RBP8.08□□□□□ -1.12
TRIM49B-202ENST00000622138 NMRK1Q9NWW6 199 aa8.08□□□□□ -1.12
TRIM49B-202ENST00000622138 TBC1D30Q9Y2I9 924 aa8.08□□□□□ -1.12
TRIM49B-202ENST00000622138 THRAP3Q9Y2W1 955 aaKnown RBP8.08□□□□□ -1.12
TRIM49B-202ENST00000622138 MAST2Q6P0Q8 1798 aa8.08□□□□□ -1.12
TRIM49B-202ENST00000622138 TMEM247A6NEH6 219 aa8.08□□□□□ -1.12
TRIM49B-202ENST00000622138 ZSCAN5CA6NGD5 496 aaPredicted RBP8.08□□□□□ -1.12
TRIM49B-202ENST00000622138 LGALS16A8MUM7 142 aa8.08□□□□□ -1.12
TRIM49B-202ENST00000622138 M0R2N6 131 aa8.08□□□□□ -1.12
TRIM49B-202ENST00000622138 RGL2O15211 777 aa8.08□□□□□ -1.12
TRIM49B-202ENST00000622138 ATP9AO75110 1047 aa8.08□□□□□ -1.12
TRIM49B-202ENST00000622138 UNC5CO95185 931 aa8.08□□□□□ -1.12
TRIM49B-202ENST00000622138 USP17L8P0C7I0 530 aa8.08□□□□□ -1.12
TRIM49B-202ENST00000622138 CPA3P15088 417 aa8.08□□□□□ -1.12
TRIM49B-202ENST00000622138 ECHS1P30084 290 aa8.08□□□□□ -1.12
TRIM49B-202ENST00000622138 TRAPPC10P48553 1259 aa8.08□□□□□ -1.12
TRIM49B-202ENST00000622138 ACADVLP49748 655 aa8.08□□□□□ -1.12
TRIM49B-202ENST00000622138 KCNQ4P56696 695 aa8.08□□□□□ -1.12
TRIM49B-202ENST00000622138 HLTFQ14527 1009 aaKnown RBP eCLIP8.08□□□□□ -1.12
TRIM49B-202ENST00000622138 ADRM1Q16186 407 aa8.08□□□□□ -1.12
TRIM49B-202ENST00000622138 P3H1Q32P28 736 aa8.08□□□□□ -1.12
TRIM49B-202ENST00000622138 LIN52Q52LA3 116 aa8.08□□□□□ -1.12
TRIM49B-202ENST00000622138 FKBP15Q5T1M5 1219 aa8.08□□□□□ -1.12
TRIM49B-202ENST00000622138 FBXO33Q7Z6M2 555 aa8.08□□□□□ -1.12
TRIM49B-202ENST00000622138 BLIDQ8IZY5 108 aa8.08□□□□□ -1.12
TRIM49B-202ENST00000622138 MB21D1Q8N884 522 aa8.08□□□□□ -1.12
TRIM49B-202ENST00000622138 OR2W6PQ8NHA6 318 aa8.08□□□□□ -1.12
TRIM49B-202ENST00000622138 HAUS1Q96CS2 278 aa8.08□□□□□ -1.12
TRIM49B-202ENST00000622138 DYNLL2Q96FJ2 89 aa8.08□□□□□ -1.12
TRIM49B-202ENST00000622138 EEF2KMTQ96G04 330 aa8.08□□□□□ -1.12
TRIM49B-202ENST00000622138 NUDCD1Q96RS6 583 aa8.08□□□□□ -1.12
TRIM49B-202ENST00000622138 DISC1Q9NRI5 854 aa8.08□□□□□ -1.12
TRIM49B-202ENST00000622138 ARL2BPQ9Y2Y0 163 aa8.08□□□□□ -1.12
TRIM49B-202ENST00000622138 PDS5AQ29RF7 1337 aaKnown RBP8.08□□□□□ -1.12
TRIM49B-202ENST00000622138 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.07□□□□□ -1.12
TRIM49B-202ENST00000622138 TMEM110-MUSTN1A8MSY1 372 aa8.07□□□□□ -1.12
TRIM49B-202ENST00000622138 CES2O00748 559 aa8.07□□□□□ -1.12
TRIM49B-202ENST00000622138 P4HA2O15460 535 aa8.07□□□□□ -1.12
TRIM49B-202ENST00000622138 PJA2O43164 708 aa8.07□□□□□ -1.12
TRIM49B-202ENST00000622138 ADAMTS2O95450 1211 aa8.07□□□□□ -1.12
TRIM49B-202ENST00000622138 POTEJP0CG39 1038 aa8.07□□□□□ -1.12
TRIM49B-202ENST00000622138 COL5A3P25940 1745 aaPredicted RBP8.07□□□□□ -1.12
TRIM49B-202ENST00000622138 NEK2P51955 445 aa8.07□□□□□ -1.12
TRIM49B-202ENST00000622138 PDE1BQ01064 536 aa8.07□□□□□ -1.12
TRIM49B-202ENST00000622138 CFAP157Q5JU67 520 aa8.07□□□□□ -1.12
TRIM49B-202ENST00000622138 THOC7Q6I9Y2 204 aaKnown RBP8.07□□□□□ -1.12
TRIM49B-202ENST00000622138 TMEM53Q6P2H8 277 aa8.07□□□□□ -1.12
TRIM49B-202ENST00000622138 TXNRD3Q86VQ6 643 aa8.07□□□□□ -1.12
TRIM49B-202ENST00000622138 CCDC24Q8N4L8 307 aa8.07□□□□□ -1.12
TRIM49B-202ENST00000622138 MARCH10Q8NA82 808 aaPredicted RBP8.07□□□□□ -1.12
TRIM49B-202ENST00000622138 ZNF507Q8TCN5 953 aa8.07□□□□□ -1.12
TRIM49B-202ENST00000622138 UBLCP1Q8WVY7 318 aaPredicted RBP8.07□□□□□ -1.12
TRIM49B-202ENST00000622138 CTNNBL1Q8WYA6 563 aaPredicted RBP8.07□□□□□ -1.12
TRIM49B-202ENST00000622138 PGM2Q96G03 612 aa8.07□□□□□ -1.12
TRIM49B-202ENST00000622138 TUBGCP5Q96RT8 1024 aa8.07□□□□□ -1.12
TRIM49B-202ENST00000622138 PPP1R12CQ9BZL4 782 aa8.07□□□□□ -1.12
TRIM49B-202ENST00000622138 IL17RBQ9NRM6 502 aa8.07□□□□□ -1.12
TRIM49B-202ENST00000622138 INTS9Q9NV88 658 aaKnown RBP8.07□□□□□ -1.12
TRIM49B-202ENST00000622138 LRWD1Q9UFC0 647 aa8.07□□□□□ -1.12
TRIM49B-202ENST00000622138 FBXL5Q9UKA1 691 aa8.07□□□□□ -1.12
TRIM49B-202ENST00000622138 CHMP2BQ9UQN3 213 aa8.07□□□□□ -1.12
TRIM49B-202ENST00000622138 USP20Q9Y2K6 914 aa8.07□□□□□ -1.12
TRIM49B-202ENST00000622138 FLT1P17948 1338 aa8.07□□□□□ -1.12
TRIM49B-202ENST00000622138 TSPY2A6NKD2 308 aa8.07□□□□□ -1.12
TRIM49B-202ENST00000622138 SUPT3HO75486 399 aa8.07□□□□□ -1.12
TRIM49B-202ENST00000622138 LCA5LO95447 670 aa8.07□□□□□ -1.12
TRIM49B-202ENST00000622138 PCP11498 1178 aaKnown RBP8.07□□□□□ -1.12
TRIM49B-202ENST00000622138 PORP16435 677 aaPredicted RBP8.07□□□□□ -1.12
TRIM49B-202ENST00000622138 VARSP26640 1264 aaKnown RBP8.07□□□□□ -1.12
TRIM49B-202ENST00000622138 LONP1P36776 959 aaKnown RBP8.07□□□□□ -1.12
TRIM49B-202ENST00000622138 CDK7P50613 346 aa8.07□□□□□ -1.12
TRIM49B-202ENST00000622138 MTTPP55157 894 aa8.07□□□□□ -1.12
TRIM49B-202ENST00000622138 SPIDRQ14159 915 aa8.07□□□□□ -1.12
TRIM49B-202ENST00000622138 SF3B3Q15393 1217 aaKnown RBP8.07□□□□□ -1.12
TRIM49B-202ENST00000622138 MAP7D1Q3KQU3 841 aa8.07□□□□□ -1.12
TRIM49B-202ENST00000622138 CAVIN4Q5BKX8 364 aa8.07□□□□□ -1.12
TRIM49B-202ENST00000622138 RNF43Q68DV7 783 aa8.07□□□□□ -1.12
TRIM49B-202ENST00000622138 TTI2Q6NXR4 508 aa8.07□□□□□ -1.12
TRIM49B-202ENST00000622138 UNC13DQ70J99 1090 aa8.07□□□□□ -1.12
TRIM49B-202ENST00000622138 CCNJLQ8IV13 435 aa8.07□□□□□ -1.12
TRIM49B-202ENST00000622138 TBC1D16Q8TBP0 767 aa8.07□□□□□ -1.12
TRIM49B-202ENST00000622138 BHMTQ93088 406 aa8.07□□□□□ -1.12
TRIM49B-202ENST00000622138 UTP4Q969X6 686 aaKnown RBP8.07□□□□□ -1.12
TRIM49B-202ENST00000622138 KRT12Q99456 494 aa8.07□□□□□ -1.12
TRIM49B-202ENST00000622138 DUSP9Q99956 384 aaKnown RBP8.07□□□□□ -1.12
TRIM49B-202ENST00000622138 TLR10Q9BXR5 811 aa8.07□□□□□ -1.12
TRIM49B-202ENST00000622138 TTYH3Q9C0H2 523 aa8.07□□□□□ -1.12
TRIM49B-202ENST00000622138 EPB41L1Q9H4G0 881 aa8.07□□□□□ -1.12
TRIM49B-202ENST00000622138 EXOC1Q9NV70 894 aa8.07□□□□□ -1.12
TRIM49B-202ENST00000622138 PTTG2Q9NZH5 202 aa8.07□□□□□ -1.12
TRIM49B-202ENST00000622138 EHD2Q9NZN4 543 aa8.07□□□□□ -1.12
TRIM49B-202ENST00000622138 AIPL1Q9NZN9 384 aa8.07□□□□□ -1.12
TRIM49B-202ENST00000622138 NDUFA13Q9P0J0 144 aa8.07□□□□□ -1.12
TRIM49B-202ENST00000622138 HSFX1Q9UBD0 423 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms