RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 CCDC172P0C7W6 258 aa10.26□□□□□ -0.77
PDPN-212ENST00000621990 RXRBP28702 533 aa10.26□□□□□ -0.77
PDPN-212ENST00000621990 CARSP49589 748 aaKnown RBP10.26□□□□□ -0.77
PDPN-212ENST00000621990 MRPS9P82933 396 aaKnown RBP10.26□□□□□ -0.77
PDPN-212ENST00000621990 LEKR1Q6ZMV7 388 aa10.26□□□□□ -0.77
PDPN-212ENST00000621990 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.26□□□□□ -0.77
PDPN-212ENST00000621990 INTS8Q75QN2 995 aaKnown RBP10.26□□□□□ -0.77
PDPN-212ENST00000621990 MIER3Q7Z3K6 550 aa10.26□□□□□ -0.77
PDPN-212ENST00000621990 IQCKQ8N0W5 287 aa10.26□□□□□ -0.77
PDPN-212ENST00000621990 GOLGA6L1Q8N7Z2 621 aa10.26□□□□□ -0.77
PDPN-212ENST00000621990 ZFP91Q96JP5 570 aaPredicted RBP10.26□□□□□ -0.77
PDPN-212ENST00000621990 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.26□□□□□ -0.77
PDPN-212ENST00000621990 ZNF341Q9BYN7 854 aa10.26□□□□□ -0.77
PDPN-212ENST00000621990 EPB41L5Q9HCM4 733 aa10.26□□□□□ -0.77
PDPN-212ENST00000621990 LARSQ9P2J5 1176 aaKnown RBP10.26□□□□□ -0.77
PDPN-212ENST00000621990 PGRMC1O00264 195 aaKnown RBP10.25□□□□□ -0.77
PDPN-212ENST00000621990 RAD51CO43502 376 aa10.25□□□□□ -0.77
PDPN-212ENST00000621990 OPA1O60313 960 aa10.25□□□□□ -0.77
PDPN-212ENST00000621990 TRIM49P0CI25 452 aa10.25□□□□□ -0.77
PDPN-212ENST00000621990 TRIM49CP0CI26 452 aa10.25□□□□□ -0.77
PDPN-212ENST00000621990 PLS3P13797 630 aa10.25□□□□□ -0.77
PDPN-212ENST00000621990 NOP2P46087 812 aaKnown RBP10.25□□□□□ -0.77
PDPN-212ENST00000621990 QARSP47897 775 aaKnown RBP10.25□□□□□ -0.77
PDPN-212ENST00000621990 GALCP54803 685 aa10.25□□□□□ -0.77
PDPN-212ENST00000621990 GUCY2DQ02846 1103 aa10.25□□□□□ -0.77
PDPN-212ENST00000621990 PPFIA1Q13136 1202 aa10.25□□□□□ -0.77
PDPN-212ENST00000621990 TNIP1Q15025 636 aa10.25□□□□□ -0.77
PDPN-212ENST00000621990 TCEAL1Q15170 157 aa10.25□□□□□ -0.77
PDPN-212ENST00000621990 METTL13Q8N6R0 699 aa10.25□□□□□ -0.77
PDPN-212ENST00000621990 WHAMMQ8TF30 809 aa10.25□□□□□ -0.77
PDPN-212ENST00000621990 CASKIN2Q8WXE0 1202 aa10.25□□□□□ -0.77
PDPN-212ENST00000621990 RFFLQ8WZ73 363 aa10.25□□□□□ -0.77
PDPN-212ENST00000621990 VTI1AQ96AJ9 217 aa10.25□□□□□ -0.77
PDPN-212ENST00000621990 ZBTB9Q96C00 473 aa10.25□□□□□ -0.77
PDPN-212ENST00000621990 HOOK2Q96ED9 719 aa10.25□□□□□ -0.77
PDPN-212ENST00000621990 TEPSINQ96N21 525 aa10.25□□□□□ -0.77
PDPN-212ENST00000621990 GOLGA6CA6NDK9 693 aa10.25□□□□□ -0.77
PDPN-212ENST00000621990 ZSCAN5CA6NGD5 496 aaPredicted RBP10.25□□□□□ -0.77
PDPN-212ENST00000621990 K7ENM7 598 aa10.25□□□□□ -0.77
PDPN-212ENST00000621990 TULP2O00295 520 aa10.25□□□□□ -0.77
PDPN-212ENST00000621990 EXOC3O60645 756 aa10.25□□□□□ -0.77
PDPN-212ENST00000621990 GOLGA6DP0CG33 693 aa10.25□□□□□ -0.77
PDPN-212ENST00000621990 HADHBP55084 474 aaKnown RBP10.25□□□□□ -0.77
PDPN-212ENST00000621990 GTF2BQ00403 316 aa10.25□□□□□ -0.77
PDPN-212ENST00000621990 PPATQ06203 517 aa10.25□□□□□ -0.77
PDPN-212ENST00000621990 SPP2Q13103 211 aa10.25□□□□□ -0.77
PDPN-212ENST00000621990 NBPF9Q3BBW0 867 aa10.25□□□□□ -0.77
PDPN-212ENST00000621990 PHLDB3Q6NSJ2 640 aa10.25□□□□□ -0.77
PDPN-212ENST00000621990 PEX26Q7Z412 305 aa10.25□□□□□ -0.77
PDPN-212ENST00000621990 DNAAF5Q86Y56 855 aa10.25□□□□□ -0.77
PDPN-212ENST00000621990 GLYCTKQ8IVS8 523 aa10.25□□□□□ -0.77
PDPN-212ENST00000621990 CD302Q8IX05 232 aa10.25□□□□□ -0.77
PDPN-212ENST00000621990 C1orf131Q8NDD1 294 aaKnown RBP10.25□□□□□ -0.77
PDPN-212ENST00000621990 FAM76AQ8TAV0 307 aa10.25□□□□□ -0.77
PDPN-212ENST00000621990 SYTL5Q8TDW5 730 aaPredicted RBP10.25□□□□□ -0.77
PDPN-212ENST00000621990 U2AF1L4Q8WU68 220 aaKnown RBP10.25□□□□□ -0.77
PDPN-212ENST00000621990 ISCUQ9H1K1 167 aa10.25□□□□□ -0.77
PDPN-212ENST00000621990 GOLPH3Q9H4A6 298 aa10.25□□□□□ -0.77
PDPN-212ENST00000621990 TBC1D22BQ9NU19 505 aa10.25□□□□□ -0.77
PDPN-212ENST00000621990 GOLGA6AQ9NYA3 693 aa10.25□□□□□ -0.77
PDPN-212ENST00000621990 CWC15Q9P013 229 aaKnown RBP10.25□□□□□ -0.77
PDPN-212ENST00000621990 NFU1Q9UMS0 254 aa10.25□□□□□ -0.77
PDPN-212ENST00000621990 CCDC188H7C350 402 aa10.24□□□□□ -0.77
PDPN-212ENST00000621990 FAM153BP0C7A2 387 aa10.24□□□□□ -0.77
PDPN-212ENST00000621990 ECHS1P30084 290 aa10.24□□□□□ -0.77
PDPN-212ENST00000621990 DNA2P51530 1060 aa10.24□□□□□ -0.77
PDPN-212ENST00000621990 MTMR1Q13613 665 aa10.24□□□□□ -0.77
PDPN-212ENST00000621990 FAM153CQ494X1 144 aa10.24□□□□□ -0.77
PDPN-212ENST00000621990 EPC2Q52LR7 807 aa10.24□□□□□ -0.77
PDPN-212ENST00000621990 C1orf220Q5T0J3 134 aa10.24□□□□□ -0.77
PDPN-212ENST00000621990 LRRC31Q6UY01 552 aa10.24□□□□□ -0.77
PDPN-212ENST00000621990 C4orf19Q8IY42 314 aa10.24□□□□□ -0.77
PDPN-212ENST00000621990 NIM1KQ8IY84 436 aa10.24□□□□□ -0.77
PDPN-212ENST00000621990 SYCP3Q8IZU3 236 aa10.24□□□□□ -0.77
PDPN-212ENST00000621990 PIK3R5Q8WYR1 880 aa10.24□□□□□ -0.77
PDPN-212ENST00000621990 SEC14L1Q92503 715 aa10.24□□□□□ -0.77
PDPN-212ENST00000621990 ACCSQ96QU6 501 aa10.24□□□□□ -0.77
PDPN-212ENST00000621990 MYOZ2Q9NPC6 264 aa10.24□□□□□ -0.77
PDPN-212ENST00000621990 FAM153AQ9UHL3 310 aa10.24□□□□□ -0.77
PDPN-212ENST00000621990 PNMA2Q9UL42 364 aa10.24□□□□□ -0.77
PDPN-212ENST00000621990 WDR81Q562E7 1941 aa10.24□□□□□ -0.77
PDPN-212ENST00000621990 ASTN2O75129 1339 aaPredicted RBP10.24□□□□□ -0.77
PDPN-212ENST00000621990 ESYT3A0FGR9 886 aa10.24□□□□□ -0.77
PDPN-212ENST00000621990 HSF2BPO75031 334 aa10.24□□□□□ -0.77
PDPN-212ENST00000621990 DPEP1P16444 411 aa10.24□□□□□ -0.77
PDPN-212ENST00000621990 NCKAP1LP55160 1127 aa10.24□□□□□ -0.77
PDPN-212ENST00000621990 CXCL9Q07325 125 aa10.24□□□□□ -0.77
PDPN-212ENST00000621990 CUL1Q13616 776 aa10.24□□□□□ -0.77
PDPN-212ENST00000621990 EMC10Q5UCC4 262 aa10.24□□□□□ -0.77
PDPN-212ENST00000621990 SLC17A8Q8NDX2 589 aa10.24□□□□□ -0.77
PDPN-212ENST00000621990 SLC35G2Q8TBE7 412 aa10.24□□□□□ -0.77
PDPN-212ENST00000621990 TAF1DQ9H5J8 278 aaPredicted RBP10.24□□□□□ -0.77
PDPN-212ENST00000621990 DIS3Q9Y2L1 958 aaKnown RBP10.24□□□□□ -0.77
PDPN-212ENST00000621990 NOC2LQ9Y3T9 749 aaKnown RBP10.24□□□□□ -0.77
PDPN-212ENST00000621990 DDX39AO00148 427 aaKnown RBP10.23□□□□□ -0.77
PDPN-212ENST00000621990 CEP104O60308 925 aa10.23□□□□□ -0.77
PDPN-212ENST00000621990 BUB1BO60566 1050 aaPredicted RBP10.23□□□□□ -0.77
PDPN-212ENST00000621990 YWHABP31946 246 aaKnown RBP10.23□□□□□ -0.77
PDPN-212ENST00000621990 HSPA9P38646 679 aaKnown RBP10.23□□□□□ -0.77
PDPN-212ENST00000621990 VAMP7P51809 220 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms