RNA–Protein interactions for RNA: ENST00000618363.4

SHANK2-221, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 3

Gene SHANK2, Length 434 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-221ENST00000618363 UBE2ZQ9H832 354 aaPredicted RBP13.06□□□□□ -0.32
SHANK2-221ENST00000618363 ALG13Q9NP73 1137 aaKnown RBP13.06□□□□□ -0.32
SHANK2-221ENST00000618363 PLAGL2Q9UPG8 496 aa13.06□□□□□ -0.32
SHANK2-221ENST00000618363 FAM50BQ9Y247 325 aa13.06□□□□□ -0.32
SHANK2-221ENST00000618363 COL4A3BPQ9Y5P4 624 aa13.06□□□□□ -0.32
SHANK2-221ENST00000618363 CHD7Q9P2D1 2997 aa13.05□□□□□ -0.32
SHANK2-221ENST00000618363 CSDE1O75534 798 aaKnown RBP13.05□□□□□ -0.32
SHANK2-221ENST00000618363 SLITRK3O94933 977 aa13.05□□□□□ -0.32
SHANK2-221ENST00000618363 EOMESO95936 686 aa13.05□□□□□ -0.32
SHANK2-221ENST00000618363 FGFR1P11362 822 aa13.05□□□□□ -0.32
SHANK2-221ENST00000618363 LAG3P18627 525 aa13.05□□□□□ -0.32
SHANK2-221ENST00000618363 FGFR4P22455 802 aa13.05□□□□□ -0.32
SHANK2-221ENST00000618363 MCM2P49736 904 aa13.05□□□□□ -0.32
SHANK2-221ENST00000618363 GATMP50440 423 aa13.05□□□□□ -0.32
SHANK2-221ENST00000618363 KCNQ1P51787 676 aa13.05□□□□□ -0.32
SHANK2-221ENST00000618363 ST3GAL1Q11201 340 aa13.05□□□□□ -0.32
SHANK2-221ENST00000618363 TFDP1Q14186 410 aa13.05□□□□□ -0.32
SHANK2-221ENST00000618363 EMC2Q15006 297 aa13.05□□□□□ -0.32
SHANK2-221ENST00000618363 ZNF174Q15697 407 aa13.05□□□□□ -0.32
SHANK2-221ENST00000618363 PUS10Q3MIT2 529 aaKnown RBP13.05□□□□□ -0.32
SHANK2-221ENST00000618363 SRGAP1Q7Z6B7 1085 aa13.05□□□□□ -0.32
SHANK2-221ENST00000618363 ECHDC2Q86YB7 292 aa13.05□□□□□ -0.32
SHANK2-221ENST00000618363 CRIPAKQ8N1N5 446 aa13.05□□□□□ -0.32
SHANK2-221ENST00000618363 KLHL23Q8NBE8 558 aa13.05□□□□□ -0.32
SHANK2-221ENST00000618363 PRPF31Q8WWY3 499 aaKnown RBP13.05□□□□□ -0.32
SHANK2-221ENST00000618363 TMEM143Q96AN5 459 aa13.05□□□□□ -0.32
SHANK2-221ENST00000618363 CEP89Q96ST8 783 aa13.05□□□□□ -0.32
SHANK2-221ENST00000618363 DHX33Q9H6R0 707 aaKnown RBP13.05□□□□□ -0.32
SHANK2-221ENST00000618363 BMP2KQ9NSY1 1161 aaPredicted RBP13.05□□□□□ -0.32
SHANK2-221ENST00000618363 ANKEF1Q9NU02 776 aa13.05□□□□□ -0.32
SHANK2-221ENST00000618363 PUF60Q9UHX1 559 aaKnown RBP13.05□□□□□ -0.32
SHANK2-221ENST00000618363 PIN4Q9Y237 131 aaKnown RBP13.05□□□□□ -0.32
SHANK2-221ENST00000618363 A0A0C4DFX4 3053 aa13.04□□□□□ -0.32
SHANK2-221ENST00000618363 A0A0U1RQF3 1178 aa13.04□□□□□ -0.32
SHANK2-221ENST00000618363 DGAT1O75907 488 aa13.04□□□□□ -0.32
SHANK2-221ENST00000618363 ERLIN2O94905 339 aa13.04□□□□□ -0.32
SHANK2-221ENST00000618363 OR52Z1P0C646 297 aa13.04□□□□□ -0.32
SHANK2-221ENST00000618363 BMP1P13497 986 aa13.04□□□□□ -0.32
SHANK2-221ENST00000618363 PHKA2P46019 1235 aa13.04□□□□□ -0.32
SHANK2-221ENST00000618363 TRAPPC10P48553 1259 aa13.04□□□□□ -0.32
SHANK2-221ENST00000618363 RAB27AP51159 221 aa13.04□□□□□ -0.32
SHANK2-221ENST00000618363 KRT17Q04695 432 aa13.04□□□□□ -0.32
SHANK2-221ENST00000618363 SPIRE1Q08AE8 756 aa13.04□□□□□ -0.32
SHANK2-221ENST00000618363 MXD4Q14582 209 aaPredicted RBP13.04□□□□□ -0.32
SHANK2-221ENST00000618363 BMS1Q14692 1282 aaKnown RBP13.04□□□□□ -0.32
SHANK2-221ENST00000618363 TTC38Q5R3I4 469 aa13.04□□□□□ -0.32
SHANK2-221ENST00000618363 NOSTRINQ8IVI9 506 aa13.04□□□□□ -0.32
SHANK2-221ENST00000618363 KSR1Q8IVT5 923 aa13.04□□□□□ -0.32
SHANK2-221ENST00000618363 LRRC43Q8N309 656 aa13.04□□□□□ -0.32
SHANK2-221ENST00000618363 POF1BQ8WVV4 589 aa13.04□□□□□ -0.32
SHANK2-221ENST00000618363 RSPH1Q8WYR4 309 aa13.04□□□□□ -0.32
SHANK2-221ENST00000618363 PGBD4Q96DM1 585 aa13.04□□□□□ -0.32
SHANK2-221ENST00000618363 MTMR9Q96QG7 549 aa13.04□□□□□ -0.32
SHANK2-221ENST00000618363 KIF2CQ99661 725 aa13.04□□□□□ -0.32
SHANK2-221ENST00000618363 MRPL9Q9BYD2 267 aaKnown RBP13.04□□□□□ -0.32
SHANK2-221ENST00000618363 RAB34Q9BZG1 259 aa13.04□□□□□ -0.32
SHANK2-221ENST00000618363 IGFLR1Q9H665 355 aa13.04□□□□□ -0.32
SHANK2-221ENST00000618363 TYW1Q9NV66 732 aaKnown RBP13.04□□□□□ -0.32
SHANK2-221ENST00000618363 CLDND1Q9NY35 253 aa13.04□□□□□ -0.32
SHANK2-221ENST00000618363 CUL9Q8IWT3 2517 aa13.04□□□□□ -0.32
SHANK2-221ENST00000618363 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.03□□□□□ -0.32
SHANK2-221ENST00000618363 CARNS1A5YM72 827 aa13.03□□□□□ -0.32
SHANK2-221ENST00000618363 H3BQV1 296 aa13.03□□□□□ -0.32
SHANK2-221ENST00000618363 LYPLA2O95372 231 aa13.03□□□□□ -0.32
SHANK2-221ENST00000618363 ITGB1P05556 798 aa13.03□□□□□ -0.32
SHANK2-221ENST00000618363 XRCC6P12956 609 aaKnown RBP eCLIP13.03□□□□□ -0.32
SHANK2-221ENST00000618363 PPM1AP35813 382 aa13.03□□□□□ -0.32
SHANK2-221ENST00000618363 TECP42680 631 aa13.03□□□□□ -0.32
SHANK2-221ENST00000618363 UBE3AQ05086 875 aa13.03□□□□□ -0.32
SHANK2-221ENST00000618363 LAMTOR4Q0VGL1 99 aa13.03□□□□□ -0.32
SHANK2-221ENST00000618363 LEXMQ3ZCV2 418 aa13.03□□□□□ -0.32
SHANK2-221ENST00000618363 MCTP1Q6DN14 999 aa13.03□□□□□ -0.32
SHANK2-221ENST00000618363 FERMT3Q86UX7 667 aa13.03□□□□□ -0.32
SHANK2-221ENST00000618363 ZNF579Q8NAF0 562 aaKnown RBP13.03□□□□□ -0.32
SHANK2-221ENST00000618363 RNF149Q8NC42 400 aa13.03□□□□□ -0.32
SHANK2-221ENST00000618363 SPPL3Q8TCT6 385 aa13.03□□□□□ -0.32
SHANK2-221ENST00000618363 PABPC5Q96DU9 382 aaKnown RBP13.03□□□□□ -0.32
SHANK2-221ENST00000618363 ZNF558Q96NG5 402 aa13.03□□□□□ -0.32
SHANK2-221ENST00000618363 HSD17B14Q9BPX1 270 aa13.03□□□□□ -0.32
SHANK2-221ENST00000618363 TUFT1Q9NNX1 390 aa13.03□□□□□ -0.32
SHANK2-221ENST00000618363 WRAP73Q9P2S5 460 aaPredicted RBP13.03□□□□□ -0.32
SHANK2-221ENST00000618363 STK24Q9Y6E0 443 aa13.03□□□□□ -0.32
SHANK2-221ENST00000618363 PRUNE2Q8WUY3 3088 aa13.03□□□□□ -0.32
SHANK2-221ENST00000618363 UNC80Q8N2C7 3258 aa13.02□□□□□ -0.32
SHANK2-221ENST00000618363 TCF20Q9UGU0 1960 aaKnown RBP13.02□□□□□ -0.32
SHANK2-221ENST00000618363 POTEMA6NI47 508 aa13.02□□□□□ -0.33
SHANK2-221ENST00000618363 FGF18O76093 207 aa13.02□□□□□ -0.33
SHANK2-221ENST00000618363 LINC00271P0C7V0 271 aa13.02□□□□□ -0.33
SHANK2-221ENST00000618363 ALDH7A1P49419 539 aaKnown RBP13.02□□□□□ -0.33
SHANK2-221ENST00000618363 RNASELQ05823 741 aaKnown RBP13.02□□□□□ -0.33
SHANK2-221ENST00000618363 PCBP1Q15365 356 aaKnown RBP eCLIP13.02□□□□□ -0.33
SHANK2-221ENST00000618363 HAUS3Q68CZ6 603 aa13.02□□□□□ -0.33
SHANK2-221ENST00000618363 PDE12Q6L8Q7 609 aaKnown RBP13.02□□□□□ -0.33
SHANK2-221ENST00000618363 GLB1LQ6UWU2 654 aa13.02□□□□□ -0.33
SHANK2-221ENST00000618363 COLGALT1Q8NBJ5 622 aa13.02□□□□□ -0.33
SHANK2-221ENST00000618363 HELQQ8TDG4 1101 aa13.02□□□□□ -0.33
SHANK2-221ENST00000618363 PIGOQ8TEQ8 1089 aa13.02□□□□□ -0.33
SHANK2-221ENST00000618363 CASD1Q96PB1 797 aa13.02□□□□□ -0.33
SHANK2-221ENST00000618363 NACC1Q96RE7 527 aa13.02□□□□□ -0.33
SHANK2-221ENST00000618363 TMEM60Q9H2L4 133 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms