RNA–Protein interactions for RNA: ENST00000609081.1

LMBR1-220, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-220ENST00000609081 TMEM60Q9H2L4 133 aa16.85■□□□□ 0.29
LMBR1-220ENST00000609081 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.85■□□□□ 0.29
LMBR1-220ENST00000609081 MRPL42Q9Y6G3 142 aaKnown RBP16.85■□□□□ 0.29
LMBR1-220ENST00000609081 VCANP13611 3396 aa16.85■□□□□ 0.29
LMBR1-220ENST00000609081 CARNS1A5YM72 827 aa16.84■□□□□ 0.29
LMBR1-220ENST00000609081 WNT7AO00755 349 aa16.84■□□□□ 0.29
LMBR1-220ENST00000609081 NCK2O43639 380 aa16.84■□□□□ 0.29
LMBR1-220ENST00000609081 RAB27AP51159 221 aa16.84■□□□□ 0.29
LMBR1-220ENST00000609081 POU5F1BQ06416 359 aa16.84■□□□□ 0.29
LMBR1-220ENST00000609081 HAUS3Q68CZ6 603 aa16.84■□□□□ 0.29
LMBR1-220ENST00000609081 NLRP4Q96MN2 994 aa16.84■□□□□ 0.29
LMBR1-220ENST00000609081 MTRQ99707 1265 aa16.84■□□□□ 0.29
LMBR1-220ENST00000609081 POLR3CQ9BUI4 534 aaPredicted RBP16.84■□□□□ 0.29
LMBR1-220ENST00000609081 COL25A1Q9BXS0 654 aaPredicted RBP16.84■□□□□ 0.29
LMBR1-220ENST00000609081 TMEM117Q9H0C3 514 aa16.84■□□□□ 0.29
LMBR1-220ENST00000609081 PRDM6Q9NQX0 595 aa16.84■□□□□ 0.29
LMBR1-220ENST00000609081 RBAK-RBAKDNI3L0D1 243 aa16.83■□□□□ 0.28
LMBR1-220ENST00000609081 RPA1P27694 616 aa16.83■□□□□ 0.28
LMBR1-220ENST00000609081 FXR2P51116 673 aaKnown RBP eCLIP16.83■□□□□ 0.28
LMBR1-220ENST00000609081 TFDP1Q14186 410 aa16.83■□□□□ 0.28
LMBR1-220ENST00000609081 ZNF174Q15697 407 aa16.83■□□□□ 0.28
LMBR1-220ENST00000609081 ECHDC2Q86YB7 292 aa16.83■□□□□ 0.28
LMBR1-220ENST00000609081 ABI1Q8IZP0 508 aa16.83■□□□□ 0.28
LMBR1-220ENST00000609081 PRPF31Q8WWY3 499 aaKnown RBP16.83■□□□□ 0.28
LMBR1-220ENST00000609081 NACC1Q96RE7 527 aa16.83■□□□□ 0.28
LMBR1-220ENST00000609081 KIAA1671Q9BY89 1806 aa16.83■□□□□ 0.28
LMBR1-220ENST00000609081 NSUN3Q9H649 340 aaKnown RBP16.83■□□□□ 0.28
LMBR1-220ENST00000609081 IFT122Q9HBG6 1241 aa16.83■□□□□ 0.28
LMBR1-220ENST00000609081 PCDHB12Q9Y5F1 795 aa16.83■□□□□ 0.28
LMBR1-220ENST00000609081 POTEMA6NI47 508 aa16.82■□□□□ 0.28
LMBR1-220ENST00000609081 TBKBP1A7MCY6 615 aa16.82■□□□□ 0.28
LMBR1-220ENST00000609081 PHKA2P46019 1235 aa16.82■□□□□ 0.28
LMBR1-220ENST00000609081 RARRES1P49788 294 aa16.82■□□□□ 0.28
LMBR1-220ENST00000609081 UBE3AQ05086 875 aa16.82■□□□□ 0.28
LMBR1-220ENST00000609081 LAMTOR4Q0VGL1 99 aa16.82■□□□□ 0.28
LMBR1-220ENST00000609081 PDIA5Q14554 519 aa16.82■□□□□ 0.28
LMBR1-220ENST00000609081 PAN2Q504Q3 1202 aaKnown RBP16.82■□□□□ 0.28
LMBR1-220ENST00000609081 RILPL1Q5EBL4 403 aa16.82■□□□□ 0.28
LMBR1-220ENST00000609081 CATSPER4Q7RTX7 472 aa16.82■□□□□ 0.28
LMBR1-220ENST00000609081 FERMT3Q86UX7 667 aa16.82■□□□□ 0.28
LMBR1-220ENST00000609081 ZNF579Q8NAF0 562 aaKnown RBP16.82■□□□□ 0.28
LMBR1-220ENST00000609081 PPP2R3CQ969Q6 453 aa16.82■□□□□ 0.28
LMBR1-220ENST00000609081 TMEM143Q96AN5 459 aa16.82■□□□□ 0.28
LMBR1-220ENST00000609081 ZNF668Q96K58 619 aaPredicted RBP16.82■□□□□ 0.28
LMBR1-220ENST00000609081 DBR1Q9UK59 544 aaKnown RBP16.82■□□□□ 0.28
LMBR1-220ENST00000609081 PLAGL2Q9UPG8 496 aa16.82■□□□□ 0.28
LMBR1-220ENST00000609081 SMC3Q9UQE7 1217 aa16.82■□□□□ 0.28
LMBR1-220ENST00000609081 MYO7AQ13402 2215 aa16.82■□□□□ 0.28
LMBR1-220ENST00000609081 H3BQV1 296 aa16.81■□□□□ 0.28
LMBR1-220ENST00000609081 SPATA31C1P0DKV0 1188 aa16.81■□□□□ 0.28
LMBR1-220ENST00000609081 LAG3P18627 525 aa16.81■□□□□ 0.28
LMBR1-220ENST00000609081 PRPHP41219 470 aa16.81■□□□□ 0.28
LMBR1-220ENST00000609081 TECP42680 631 aa16.81■□□□□ 0.28
LMBR1-220ENST00000609081 SPOUT1Q5T280 376 aaKnown RBP16.81■□□□□ 0.28
LMBR1-220ENST00000609081 FAM102BQ5T8I3 360 aa16.81■□□□□ 0.28
LMBR1-220ENST00000609081 TWF2Q6IBS0 349 aaKnown RBP16.81■□□□□ 0.28
LMBR1-220ENST00000609081 CATSPER3Q86XQ3 398 aa16.81■□□□□ 0.28
LMBR1-220ENST00000609081 IFNLR1Q8IU57 520 aaPredicted RBP16.81■□□□□ 0.28
LMBR1-220ENST00000609081 LRRC43Q8N309 656 aa16.81■□□□□ 0.28
LMBR1-220ENST00000609081 MCPH1Q8NEM0 835 aa16.81■□□□□ 0.28
LMBR1-220ENST00000609081 MRPL9Q9BYD2 267 aaKnown RBP16.81■□□□□ 0.28
LMBR1-220ENST00000609081 NFKBIZQ9BYH8 718 aa16.81■□□□□ 0.28
LMBR1-220ENST00000609081 AGPAT5Q9NUQ2 364 aa16.81■□□□□ 0.28
LMBR1-220ENST00000609081 DAXXQ9UER7 740 aaPredicted RBP16.81■□□□□ 0.28
LMBR1-220ENST00000609081 PIN4Q9Y237 131 aaKnown RBP16.81■□□□□ 0.28
LMBR1-220ENST00000609081 REV3LO60673 3130 aa16.8■□□□□ 0.28
LMBR1-220ENST00000609081 ZBTB39O15060 712 aa16.8■□□□□ 0.28
LMBR1-220ENST00000609081 ZNF623O75123 536 aa16.8■□□□□ 0.28
LMBR1-220ENST00000609081 CD2BP2O95400 341 aaKnown RBP16.8■□□□□ 0.28
LMBR1-220ENST00000609081 SRGAP2CP0DJJ0 459 aa16.8■□□□□ 0.28
LMBR1-220ENST00000609081 GJB2P29033 226 aa16.8■□□□□ 0.28
LMBR1-220ENST00000609081 AXLP30530 894 aa16.8■□□□□ 0.28
LMBR1-220ENST00000609081 PPM1AP35813 382 aa16.8■□□□□ 0.28
LMBR1-220ENST00000609081 NCBP1Q09161 790 aaKnown RBP16.8■□□□□ 0.28
LMBR1-220ENST00000609081 ZNF598Q86UK7 904 aaKnown RBP16.8■□□□□ 0.28
LMBR1-220ENST00000609081 KSR1Q8IVT5 923 aa16.8■□□□□ 0.28
LMBR1-220ENST00000609081 C4orf32Q8N8J7 132 aa16.8■□□□□ 0.28
LMBR1-220ENST00000609081 RNF149Q8NC42 400 aa16.8■□□□□ 0.28
LMBR1-220ENST00000609081 BACH2Q9BYV9 841 aa16.8■□□□□ 0.28
LMBR1-220ENST00000609081 UBE2ZQ9H832 354 aaPredicted RBP16.8■□□□□ 0.28
LMBR1-220ENST00000609081 XPNPEP1Q9NQW7 623 aa16.8■□□□□ 0.28
LMBR1-220ENST00000609081 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.79■□□□□ 0.28
LMBR1-220ENST00000609081 FSD2A1L4K1 749 aa16.79■□□□□ 0.28
LMBR1-220ENST00000609081 GRM6O15303 877 aa16.79■□□□□ 0.28
LMBR1-220ENST00000609081 FGFR1P11362 822 aa16.79■□□□□ 0.28
LMBR1-220ENST00000609081 IBSPP21815 317 aaPredicted RBP16.79■□□□□ 0.28
LMBR1-220ENST00000609081 FGFR4P22455 802 aa16.79■□□□□ 0.28
LMBR1-220ENST00000609081 GATMP50440 423 aa16.79■□□□□ 0.28
LMBR1-220ENST00000609081 PTENP60484 403 aa16.79■□□□□ 0.28
LMBR1-220ENST00000609081 PTGDRQ13258 359 aa16.79■□□□□ 0.28
LMBR1-220ENST00000609081 COL19A1Q14993 1142 aa16.79■□□□□ 0.28
LMBR1-220ENST00000609081 MCTP1Q6DN14 999 aa16.79■□□□□ 0.28
LMBR1-220ENST00000609081 PDE12Q6L8Q7 609 aaKnown RBP16.79■□□□□ 0.28
LMBR1-220ENST00000609081 KCTD17Q8N5Z5 321 aa16.79■□□□□ 0.28
LMBR1-220ENST00000609081 KLHL23Q8NBE8 558 aa16.79■□□□□ 0.28
LMBR1-220ENST00000609081 PIGOQ8TEQ8 1089 aa16.79■□□□□ 0.28
LMBR1-220ENST00000609081 PGBD4Q96DM1 585 aa16.79■□□□□ 0.28
LMBR1-220ENST00000609081 PABPC5Q96DU9 382 aaKnown RBP16.79■□□□□ 0.28
LMBR1-220ENST00000609081 CCDC51Q96ER9 411 aa16.79■□□□□ 0.28
LMBR1-220ENST00000609081 FAM105AQ9NUU6 356 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms