RNA–Protein interactions for RNA: ENST00000601341.5

VRK3-223, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK3, Length 1,777 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-223ENST00000601341 CD99L2Q8TCZ2 262 aa12.84□□□□□ -0.35
VRK3-223ENST00000601341 BBXQ8WY36 941 aaPredicted RBP12.84□□□□□ -0.35
VRK3-223ENST00000601341 DRC1Q96MC2 740 aa12.84□□□□□ -0.35
VRK3-223ENST00000601341 DNAJC7Q99615 494 aa12.84□□□□□ -0.35
VRK3-223ENST00000601341 SH2D3AQ9BRG2 576 aa12.84□□□□□ -0.35
VRK3-223ENST00000601341 ERAP1Q9NZ08 941 aa12.84□□□□□ -0.35
VRK3-223ENST00000601341 LARSQ9P2J5 1176 aaKnown RBP12.84□□□□□ -0.35
VRK3-223ENST00000601341 MAGEC2Q9UBF1 373 aaPredicted RBP12.84□□□□□ -0.35
VRK3-223ENST00000601341 SRRDQ9UH36 339 aa12.84□□□□□ -0.35
VRK3-223ENST00000601341 GNEQ9Y223 722 aaKnown RBP12.84□□□□□ -0.35
VRK3-223ENST00000601341 PPME1Q9Y570 386 aa12.84□□□□□ -0.35
VRK3-223ENST00000601341 DOCK5Q9H7D0 1870 aa12.84□□□□□ -0.35
VRK3-223ENST00000601341 SFI1A8K8P3 1242 aa12.84□□□□□ -0.35
VRK3-223ENST00000601341 FKTNO75072 461 aa12.84□□□□□ -0.35
VRK3-223ENST00000601341 ZRANB2O95218 330 aaKnown RBP eCLIP12.84□□□□□ -0.35
VRK3-223ENST00000601341 CCNE1P24864 410 aa12.84□□□□□ -0.35
VRK3-223ENST00000601341 MAP2K1Q02750 393 aaPredicted RBP12.84□□□□□ -0.35
VRK3-223ENST00000601341 PPP2R3AQ06190 1150 aa12.84□□□□□ -0.35
VRK3-223ENST00000601341 MTERF2Q49AM1 385 aa12.84□□□□□ -0.35
VRK3-223ENST00000601341 MAEAQ7L5Y9 396 aa12.84□□□□□ -0.35
VRK3-223ENST00000601341 TRIM50Q86XT4 487 aa12.84□□□□□ -0.35
VRK3-223ENST00000601341 OR8K1Q8NGG5 319 aa12.84□□□□□ -0.35
VRK3-223ENST00000601341 ATP8B4Q8TF62 1192 aa12.84□□□□□ -0.35
VRK3-223ENST00000601341 TRIB2Q92519 343 aa12.84□□□□□ -0.35
VRK3-223ENST00000601341 CARD6Q9BX69 1037 aa12.84□□□□□ -0.35
VRK3-223ENST00000601341 ZMYND15Q9H091 742 aa12.84□□□□□ -0.35
VRK3-223ENST00000601341 MRPL44Q9H9J2 332 aaKnown RBP12.84□□□□□ -0.35
VRK3-223ENST00000601341 POLD4Q9HCU8 107 aa12.84□□□□□ -0.35
VRK3-223ENST00000601341 TBC1D7Q9P0N9 293 aa12.84□□□□□ -0.35
VRK3-223ENST00000601341 CAPN11Q9UMQ6 739 aa12.84□□□□□ -0.35
VRK3-223ENST00000601341 Q9Y3F1 56 aa12.84□□□□□ -0.35
VRK3-223ENST00000601341 SPDYE4A6NLX3 237 aa12.83□□□□□ -0.36
VRK3-223ENST00000601341 DYNC1LI2O43237 492 aaPredicted RBP12.83□□□□□ -0.36
VRK3-223ENST00000601341 ADCY6O43306 1168 aa12.83□□□□□ -0.36
VRK3-223ENST00000601341 LGALS2P05162 132 aa12.83□□□□□ -0.36
VRK3-223ENST00000601341 HOXD8P13378 290 aaPredicted RBP12.83□□□□□ -0.36
VRK3-223ENST00000601341 AKR1A1P14550 325 aa12.83□□□□□ -0.36
VRK3-223ENST00000601341 HSPA6P17066 643 aa12.83□□□□□ -0.36
VRK3-223ENST00000601341 CLCN6P51797 869 aa12.83□□□□□ -0.36
VRK3-223ENST00000601341 CDK17Q00537 523 aa12.83□□□□□ -0.36
VRK3-223ENST00000601341 CAP1Q01518 475 aa12.83□□□□□ -0.36
VRK3-223ENST00000601341 UBXN1Q04323 297 aa12.83□□□□□ -0.36
VRK3-223ENST00000601341 MAPK7Q13164 816 aa12.83□□□□□ -0.36
VRK3-223ENST00000601341 LRRC41Q15345 812 aa12.83□□□□□ -0.36
VRK3-223ENST00000601341 DGKDQ16760 1214 aa12.83□□□□□ -0.36
VRK3-223ENST00000601341 ODR4Q5SWX8 454 aa12.83□□□□□ -0.36
VRK3-223ENST00000601341 TMCO3Q6UWJ1 677 aa12.83□□□□□ -0.36
VRK3-223ENST00000601341 DAW1Q8N136 415 aa12.83□□□□□ -0.36
VRK3-223ENST00000601341 SLC7A3Q8WY07 619 aa12.83□□□□□ -0.36
VRK3-223ENST00000601341 GOLGA1Q92805 767 aa12.83□□□□□ -0.36
VRK3-223ENST00000601341 KIFAP3Q92845 792 aa12.83□□□□□ -0.36
VRK3-223ENST00000601341 P2RX5Q93086 422 aa12.83□□□□□ -0.36
VRK3-223ENST00000601341 BEGAINQ9BUH8 593 aa12.83□□□□□ -0.36
VRK3-223ENST00000601341 ATP6V0A4Q9HBG4 840 aa12.83□□□□□ -0.36
VRK3-223ENST00000601341 PDLIM7Q9NR12 457 aa12.83□□□□□ -0.36
VRK3-223ENST00000601341 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.83□□□□□ -0.36
VRK3-223ENST00000601341 CDC23Q9UJX2 597 aa12.83□□□□□ -0.36
VRK3-223ENST00000601341 V9GYY5 206 aaPredicted RBP12.83□□□□□ -0.36
VRK3-223ENST00000601341 LOXHD1Q8IVV2 1947 aa12.83□□□□□ -0.36
VRK3-223ENST00000601341 CTAGE9A4FU28 777 aa12.82□□□□□ -0.36
VRK3-223ENST00000601341 A6NJR5 290 aa12.82□□□□□ -0.36
VRK3-223ENST00000601341 MMP3P08254 477 aa12.82□□□□□ -0.36
VRK3-223ENST00000601341 PLS3P13797 630 aa12.82□□□□□ -0.36
VRK3-223ENST00000601341 MARK3P27448 753 aa12.82□□□□□ -0.36
VRK3-223ENST00000601341 KRT9P35527 623 aa12.82□□□□□ -0.36
VRK3-223ENST00000601341 RFC5P40937 340 aa12.82□□□□□ -0.36
VRK3-223ENST00000601341 POLGP54098 1239 aaPredicted RBP12.82□□□□□ -0.36
VRK3-223ENST00000601341 PLCB4Q15147 1175 aa12.82□□□□□ -0.36
VRK3-223ENST00000601341 TARBP2Q15633 366 aaKnown RBP12.82□□□□□ -0.36
VRK3-223ENST00000601341 MEA1Q16626 185 aa12.82□□□□□ -0.36
VRK3-223ENST00000601341 TSR1Q2NL82 804 aaKnown RBP12.82□□□□□ -0.36
VRK3-223ENST00000601341 BRDTQ58F21 947 aaPredicted RBP12.82□□□□□ -0.36
VRK3-223ENST00000601341 FAM102BQ5T8I3 360 aa12.82□□□□□ -0.36
VRK3-223ENST00000601341 CENPPQ6IPU0 288 aa12.82□□□□□ -0.36
VRK3-223ENST00000601341 STXBP4Q6ZWJ1 553 aa12.82□□□□□ -0.36
VRK3-223ENST00000601341 TLK2Q86UE8 772 aa12.82□□□□□ -0.36
VRK3-223ENST00000601341 FAM178BQ8IXR5 827 aa12.82□□□□□ -0.36
VRK3-223ENST00000601341 EXOC8Q8IYI6 725 aa12.82□□□□□ -0.36
VRK3-223ENST00000601341 THSD7BQ9C0I4 1608 aa12.82□□□□□ -0.36
VRK3-223ENST00000601341 AP5M1Q9H0R1 490 aa12.82□□□□□ -0.36
VRK3-223ENST00000601341 VPS16Q9H269 839 aa12.82□□□□□ -0.36
VRK3-223ENST00000601341 C17orf75Q9HAS0 396 aa12.82□□□□□ -0.36
VRK3-223ENST00000601341 ZNF446Q9NWS9 450 aa12.82□□□□□ -0.36
VRK3-223ENST00000601341 LUC7L2Q9Y383 392 aaKnown RBP12.82□□□□□ -0.36
VRK3-223ENST00000601341 MGAMO43451 1857 aa12.82□□□□□ -0.36
VRK3-223ENST00000601341 A0A1W2PQJ5 194 aa12.81□□□□□ -0.36
VRK3-223ENST00000601341 HBP1O60381 514 aa12.81□□□□□ -0.36
VRK3-223ENST00000601341 FGFR1OPO95684 399 aaKnown RBP12.81□□□□□ -0.36
VRK3-223ENST00000601341 MAPTP10636 758 aaKnown RBP12.81□□□□□ -0.36
VRK3-223ENST00000601341 CYBAP13498 195 aa12.81□□□□□ -0.36
VRK3-223ENST00000601341 MTF1Q14872 753 aa12.81□□□□□ -0.36
VRK3-223ENST00000601341 PTPN21Q16825 1174 aa12.81□□□□□ -0.36
VRK3-223ENST00000601341 SRGAP1Q7Z6B7 1085 aa12.81□□□□□ -0.36
VRK3-223ENST00000601341 EHBP1Q8NDI1 1231 aa12.81□□□□□ -0.36
VRK3-223ENST00000601341 SLC17A8Q8NDX2 589 aa12.81□□□□□ -0.36
VRK3-223ENST00000601341 GLIS3Q8NEA6 775 aa12.81□□□□□ -0.36
VRK3-223ENST00000601341 ZNF296Q8WUU4 475 aaPredicted RBP12.81□□□□□ -0.36
VRK3-223ENST00000601341 SCFD1Q8WVM8 642 aa12.81□□□□□ -0.36
VRK3-223ENST00000601341 ARID3AQ99856 593 aa12.81□□□□□ -0.36
VRK3-223ENST00000601341 DESI2Q9BSY9 194 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms