RNA–Protein interactions for RNA: ENST00000597618.5

TRIM28-210, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-210ENST00000597618 DARSP14868 501 aaKnown RBP11.48□□□□□ -0.57
TRIM28-210ENST00000597618 MCM5P33992 734 aa11.48□□□□□ -0.57
TRIM28-210ENST00000597618 PTPN14Q15678 1187 aa11.48□□□□□ -0.57
TRIM28-210ENST00000597618 LETM2Q2VYF4 491 aa11.48□□□□□ -0.57
TRIM28-210ENST00000597618 ZNF746Q6NUN9 644 aaPredicted RBP11.48□□□□□ -0.57
TRIM28-210ENST00000597618 EFCAB12Q6NXP0 572 aa11.48□□□□□ -0.57
TRIM28-210ENST00000597618 C15orf39Q6ZRI6 1047 aa11.48□□□□□ -0.57
TRIM28-210ENST00000597618 TMEM173Q86WV6 379 aaPredicted RBP11.48□□□□□ -0.57
TRIM28-210ENST00000597618 SMAP1Q8IYB5 467 aaPredicted RBP11.48□□□□□ -0.57
TRIM28-210ENST00000597618 CCDC82Q8N4S0 544 aa11.48□□□□□ -0.57
TRIM28-210ENST00000597618 LINC01465Q8N7H1 131 aa11.48□□□□□ -0.57
TRIM28-210ENST00000597618 FANCBQ8NB91 859 aa11.48□□□□□ -0.57
TRIM28-210ENST00000597618 RUBCNQ92622 972 aa11.48□□□□□ -0.57
TRIM28-210ENST00000597618 GLT8D2Q9H1C3 349 aa11.48□□□□□ -0.57
TRIM28-210ENST00000597618 TBC1D22BQ9NU19 505 aa11.48□□□□□ -0.57
TRIM28-210ENST00000597618 SLC12A7Q9Y666 1083 aa11.48□□□□□ -0.57
TRIM28-210ENST00000597618 R4GN57 208 aa11.48□□□□□ -0.57
TRIM28-210ENST00000597618 GPR179Q6PRD1 2367 aa11.48□□□□□ -0.57
TRIM28-210ENST00000597618 KMT2BQ9UMN6 2715 aaPredicted RBP11.48□□□□□ -0.57
TRIM28-210ENST00000597618 ZFHX4Q86UP3 3567 aa11.47□□□□□ -0.57
TRIM28-210ENST00000597618 FAM86B1E9PN63 330 aa11.47□□□□□ -0.57
TRIM28-210ENST00000597618 hCG_1984214I3L0E3 225 aa11.47□□□□□ -0.57
TRIM28-210ENST00000597618 NARSO43776 548 aaKnown RBP11.47□□□□□ -0.57
TRIM28-210ENST00000597618 PSAPP07602 524 aa11.47□□□□□ -0.57
TRIM28-210ENST00000597618 CFHP08603 1231 aa11.47□□□□□ -0.57
TRIM28-210ENST00000597618 FAM86B2P0C5J1 330 aa11.47□□□□□ -0.57
TRIM28-210ENST00000597618 LIFRP42702 1097 aa11.47□□□□□ -0.57
TRIM28-210ENST00000597618 GPC3P51654 580 aa11.47□□□□□ -0.57
TRIM28-210ENST00000597618 CLCN4P51793 760 aa11.47□□□□□ -0.57
TRIM28-210ENST00000597618 SETQ01105 290 aaPredicted RBP11.47□□□□□ -0.57
TRIM28-210ENST00000597618 TBC1D8BQ0IIM8 1120 aa11.47□□□□□ -0.57
TRIM28-210ENST00000597618 GLB1LQ6UWU2 654 aa11.47□□□□□ -0.57
TRIM28-210ENST00000597618 TRMT1LQ7Z2T5 733 aaKnown RBP11.47□□□□□ -0.57
TRIM28-210ENST00000597618 PLA2G4DQ86XP0 818 aa11.47□□□□□ -0.57
TRIM28-210ENST00000597618 LRRC71Q8N4P6 559 aa11.47□□□□□ -0.57
TRIM28-210ENST00000597618 ZNF713Q8N859 430 aaPredicted RBP11.47□□□□□ -0.57
TRIM28-210ENST00000597618 STAMQ92783 540 aa11.47□□□□□ -0.57
TRIM28-210ENST00000597618 ZNF577Q9BSK1 485 aa11.47□□□□□ -0.57
TRIM28-210ENST00000597618 TBC1D17Q9HA65 648 aa11.47□□□□□ -0.57
TRIM28-210ENST00000597618 CHST12Q9NRB3 414 aa11.47□□□□□ -0.57
TRIM28-210ENST00000597618 DLL3Q9NYJ7 618 aa11.47□□□□□ -0.57
TRIM28-210ENST00000597618 PCDHA10Q9Y5I2 948 aa11.47□□□□□ -0.57
TRIM28-210ENST00000597618 SPTBN2O15020 2390 aa11.46□□□□□ -0.57
TRIM28-210ENST00000597618 CNTNAP5Q8WYK1 1306 aa11.46□□□□□ -0.57
TRIM28-210ENST00000597618 IGLV3-22A0A075B6J6 115 aa11.46□□□□□ -0.57
TRIM28-210ENST00000597618 KRBA1A5PL33 1030 aa11.46□□□□□ -0.57
TRIM28-210ENST00000597618 GALTP07902 379 aa11.46□□□□□ -0.57
TRIM28-210ENST00000597618 SKIP12755 728 aa11.46□□□□□ -0.57
TRIM28-210ENST00000597618 GSPT1P15170 499 aaKnown RBP11.46□□□□□ -0.57
TRIM28-210ENST00000597618 CHMLP26374 656 aa11.46□□□□□ -0.57
TRIM28-210ENST00000597618 KLRC2P26717 231 aa11.46□□□□□ -0.57
TRIM28-210ENST00000597618 PHKA2P46019 1235 aa11.46□□□□□ -0.57
TRIM28-210ENST00000597618 RNASELQ05823 741 aaKnown RBP11.46□□□□□ -0.57
TRIM28-210ENST00000597618 NOMO2Q5JPE7 1267 aa11.46□□□□□ -0.57
TRIM28-210ENST00000597618 TTC22Q5TAA0 569 aa11.46□□□□□ -0.57
TRIM28-210ENST00000597618 TYW1BQ6NUM6 668 aa11.46□□□□□ -0.57
TRIM28-210ENST00000597618 ELMSAN1Q6PJG2 1045 aa11.46□□□□□ -0.57
TRIM28-210ENST00000597618 MICU3Q86XE3 530 aa11.46□□□□□ -0.57
TRIM28-210ENST00000597618 RAB11FIP4Q86YS3 637 aa11.46□□□□□ -0.57
TRIM28-210ENST00000597618 CMASQ8NFW8 434 aaPredicted RBP11.46□□□□□ -0.57
TRIM28-210ENST00000597618 FEZF2Q8TBJ5 459 aa11.46□□□□□ -0.57
TRIM28-210ENST00000597618 BCL7CQ8WUZ0 217 aaPredicted RBP11.46□□□□□ -0.57
TRIM28-210ENST00000597618 NLRP7Q8WX94 980 aa11.46□□□□□ -0.57
TRIM28-210ENST00000597618 RIN2Q8WYP3 895 aaPredicted RBP11.46□□□□□ -0.57
TRIM28-210ENST00000597618 MAP4K1Q92918 833 aa11.46□□□□□ -0.57
TRIM28-210ENST00000597618 NXPE3Q969Y0 559 aa11.46□□□□□ -0.57
TRIM28-210ENST00000597618 TRAIPQ9BWF2 469 aa11.46□□□□□ -0.57
TRIM28-210ENST00000597618 TBC1D13Q9NVG8 400 aa11.46□□□□□ -0.57
TRIM28-210ENST00000597618 GABBR1Q9UBS5 961 aa11.46□□□□□ -0.57
TRIM28-210ENST00000597618 DPP7Q9UHL4 492 aa11.46□□□□□ -0.57
TRIM28-210ENST00000597618 RBM8AQ9Y5S9 174 aaKnown RBP11.46□□□□□ -0.57
TRIM28-210ENST00000597618 EVPLQ92817 2033 aa11.45□□□□□ -0.58
TRIM28-210ENST00000597618 SMCO2A6NFE2 343 aa11.45□□□□□ -0.58
TRIM28-210ENST00000597618 SGSM2O43147 1006 aa11.45□□□□□ -0.58
TRIM28-210ENST00000597618 IGHDP01880 384 aa11.45□□□□□ -0.58
TRIM28-210ENST00000597618 OATP04181 439 aa11.45□□□□□ -0.58
TRIM28-210ENST00000597618 CNPP09543 421 aaKnown RBP11.45□□□□□ -0.58
TRIM28-210ENST00000597618 SP9P0CG40 484 aa11.45□□□□□ -0.58
TRIM28-210ENST00000597618 SRFP11831 508 aa11.45□□□□□ -0.58
TRIM28-210ENST00000597618 FGFR4P22455 802 aa11.45□□□□□ -0.58
TRIM28-210ENST00000597618 SFPQP23246 707 aaKnown RBP eCLIP11.45□□□□□ -0.58
TRIM28-210ENST00000597618 GBP2P32456 591 aaPredicted RBP11.45□□□□□ -0.58
TRIM28-210ENST00000597618 CLK2P49760 499 aaKnown RBP11.45□□□□□ -0.58
TRIM28-210ENST00000597618 CDC42EP1Q00587 391 aa11.45□□□□□ -0.58
TRIM28-210ENST00000597618 TWF2Q6IBS0 349 aaKnown RBP11.45□□□□□ -0.58
TRIM28-210ENST00000597618 PHLDB3Q6NSJ2 640 aa11.45□□□□□ -0.58
TRIM28-210ENST00000597618 CYP26C1Q6V0L0 522 aa11.45□□□□□ -0.58
TRIM28-210ENST00000597618 ZNF668Q96K58 619 aaPredicted RBP11.45□□□□□ -0.58
TRIM28-210ENST00000597618 KLHL5Q96PQ7 755 aa11.45□□□□□ -0.58
TRIM28-210ENST00000597618 VN1R3Q9BXE9 311 aa11.45□□□□□ -0.58
TRIM28-210ENST00000597618 RHOBTB2Q9BYZ6 727 aa11.45□□□□□ -0.58
TRIM28-210ENST00000597618 GCOM2Q9BZD3 368 aaPredicted RBP11.45□□□□□ -0.58
TRIM28-210ENST00000597618 NRDE2Q9H7Z3 1164 aa11.45□□□□□ -0.58
TRIM28-210ENST00000597618 MRPL17Q9NRX2 175 aaKnown RBP11.45□□□□□ -0.58
TRIM28-210ENST00000597618 NRBP2Q9NSY0 501 aa11.45□□□□□ -0.58
TRIM28-210ENST00000597618 RBM28Q9NW13 759 aaKnown RBP11.45□□□□□ -0.58
TRIM28-210ENST00000597618 BARHL2Q9NY43 387 aa11.45□□□□□ -0.58
TRIM28-210ENST00000597618 EPS15L1Q9UBC2 864 aa11.45□□□□□ -0.58
TRIM28-210ENST00000597618 CA14Q9ULX7 337 aa11.45□□□□□ -0.58
TRIM28-210ENST00000597618 INPP5FQ9Y2H2 1132 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms