RNA–Protein interactions for RNA: ENST00000588323.1

VPS4B-203, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 3

Gene VPS4B, Length 463 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-203ENST00000588323 FAM20BO75063 409 aa4.94□□□□□ -1.62
VPS4B-203ENST00000588323 MFAP3LO75121 409 aa4.94□□□□□ -1.62
VPS4B-203ENST00000588323 TOX4O94842 621 aa4.94□□□□□ -1.62
VPS4B-203ENST00000588323 JUNP05412 331 aaKnown RBP4.94□□□□□ -1.62
VPS4B-203ENST00000588323 VSIG10L2P0DP72 767 aa4.94□□□□□ -1.62
VPS4B-203ENST00000588323 KRT4P19013 534 aa4.94□□□□□ -1.62
VPS4B-203ENST00000588323 MECP2P51608 486 aaKnown RBP4.94□□□□□ -1.62
VPS4B-203ENST00000588323 FSTL1Q12841 308 aa4.94□□□□□ -1.62
VPS4B-203ENST00000588323 PRAMEF9Q5VWM5 478 aa4.94□□□□□ -1.62
VPS4B-203ENST00000588323 Q6ZPA2 131 aa4.94□□□□□ -1.62
VPS4B-203ENST00000588323 CLEC14AQ86T13 490 aa4.94□□□□□ -1.62
VPS4B-203ENST00000588323 MB21D1Q8N884 522 aa4.94□□□□□ -1.62
VPS4B-203ENST00000588323 JMYQ8N9B5 988 aa4.94□□□□□ -1.62
VPS4B-203ENST00000588323 SLC25A43Q8WUT9 341 aaPredicted RBP4.94□□□□□ -1.62
VPS4B-203ENST00000588323 ATXN2LQ8WWM7 1075 aaKnown RBP4.94□□□□□ -1.62
VPS4B-203ENST00000588323 ARMC5Q96C12 935 aa4.94□□□□□ -1.62
VPS4B-203ENST00000588323 TUBGCP5Q96RT8 1024 aa4.94□□□□□ -1.62
VPS4B-203ENST00000588323 NCOA5Q9HCD5 579 aaKnown RBP4.94□□□□□ -1.62
VPS4B-203ENST00000588323 POLR3BQ9NW08 1133 aaPredicted RBP4.94□□□□□ -1.62
VPS4B-203ENST00000588323 NCDNQ9UBB6 729 aa4.94□□□□□ -1.62
VPS4B-203ENST00000588323 XDHP47989 1333 aa4.94□□□□□ -1.62
VPS4B-203ENST00000588323 H7C1D1 291 aa4.93□□□□□ -1.62
VPS4B-203ENST00000588323 DVL2O14641 736 aa4.93□□□□□ -1.62
VPS4B-203ENST00000588323 IPO13O94829 963 aaKnown RBP4.93□□□□□ -1.62
VPS4B-203ENST00000588323 CYP17A1P05093 508 aa4.93□□□□□ -1.62
VPS4B-203ENST00000588323 RABGGTBP53611 331 aa4.93□□□□□ -1.62
VPS4B-203ENST00000588323 BCAR1P56945 870 aa4.93□□□□□ -1.62
VPS4B-203ENST00000588323 ZNF174Q15697 407 aa4.93□□□□□ -1.62
VPS4B-203ENST00000588323 RABL3Q5HYI8 236 aa4.93□□□□□ -1.62
VPS4B-203ENST00000588323 ZCCHC8Q6NZY4 707 aaKnown RBP4.93□□□□□ -1.62
VPS4B-203ENST00000588323 BMP8AQ7Z5Y6 402 aa4.93□□□□□ -1.62
VPS4B-203ENST00000588323 NME9Q86XW9 330 aa4.93□□□□□ -1.62
VPS4B-203ENST00000588323 ELOA2Q8IYF1 753 aaPredicted RBP4.93□□□□□ -1.62
VPS4B-203ENST00000588323 RPUSD2Q8IZ73 545 aaKnown RBP4.93□□□□□ -1.62
VPS4B-203ENST00000588323 SYNE4Q8N205 404 aa4.93□□□□□ -1.62
VPS4B-203ENST00000588323 CHST14Q8NCH0 376 aa4.93□□□□□ -1.62
VPS4B-203ENST00000588323 RPGRQ92834 1020 aaKnown RBP4.93□□□□□ -1.62
VPS4B-203ENST00000588323 PGBD4Q96DM1 585 aa4.93□□□□□ -1.62
VPS4B-203ENST00000588323 ZNF512Q96ME7 567 aaPredicted RBP4.93□□□□□ -1.62
VPS4B-203ENST00000588323 CABP5Q9NP86 173 aa4.93□□□□□ -1.62
VPS4B-203ENST00000588323 DNAI1Q9UI46 699 aa4.93□□□□□ -1.62
VPS4B-203ENST00000588323 SYNPO2Q9UMS6 1093 aa4.93□□□□□ -1.62
VPS4B-203ENST00000588323 PTCH2Q9Y6C5 1203 aa4.93□□□□□ -1.62
VPS4B-203ENST00000588323 PTPDC1A2A3K4 754 aa4.92□□□□□ -1.62
VPS4B-203ENST00000588323 KLRG2A4D1S0 409 aaPredicted RBP4.92□□□□□ -1.62
VPS4B-203ENST00000588323 PLD2O14939 933 aa4.92□□□□□ -1.62
VPS4B-203ENST00000588323 GLRX3O76003 335 aaKnown RBP4.92□□□□□ -1.62
VPS4B-203ENST00000588323 IGFALSP35858 605 aa4.92□□□□□ -1.62
VPS4B-203ENST00000588323 NPEPPSP55786 919 aa4.92□□□□□ -1.62
VPS4B-203ENST00000588323 RBL2Q08999 1139 aa4.92□□□□□ -1.62
VPS4B-203ENST00000588323 C2orf27AQ580R0 203 aa4.92□□□□□ -1.62
VPS4B-203ENST00000588323 DPY19L2P1Q6NXN4 242 aa4.92□□□□□ -1.62
VPS4B-203ENST00000588323 MRGPREQ86SM8 312 aa4.92□□□□□ -1.62
VPS4B-203ENST00000588323 ZNF276Q8N554 614 aa4.92□□□□□ -1.62
VPS4B-203ENST00000588323 KIAA1958Q8N8K9 716 aa4.92□□□□□ -1.62
VPS4B-203ENST00000588323 MKL1Q969V6 931 aa4.92□□□□□ -1.62
VPS4B-203ENST00000588323 C16orf92Q96LL3 132 aa4.92□□□□□ -1.62
VPS4B-203ENST00000588323 MNTQ99583 582 aa4.92□□□□□ -1.62
VPS4B-203ENST00000588323 C14orf93Q9H972 538 aaKnown RBP4.92□□□□□ -1.62
VPS4B-203ENST00000588323 MAFGO15525 162 aa4.91□□□□□ -1.62
VPS4B-203ENST00000588323 BMP5P22003 454 aa4.91□□□□□ -1.62
VPS4B-203ENST00000588323 EPHA7Q15375 998 aa4.91□□□□□ -1.62
VPS4B-203ENST00000588323 SOGA3Q5TF21 947 aa4.91□□□□□ -1.62
VPS4B-203ENST00000588323 HTR3DQ70Z44 454 aa4.91□□□□□ -1.62
VPS4B-203ENST00000588323 CMTM4Q8IZR5 234 aa4.91□□□□□ -1.62
VPS4B-203ENST00000588323 MDGA1Q8NFP4 955 aa4.91□□□□□ -1.62
VPS4B-203ENST00000588323 TRPS1Q9UHF7 1281 aa4.91□□□□□ -1.62
VPS4B-203ENST00000588323 OPA1O60313 960 aa4.9□□□□□ -1.63
VPS4B-203ENST00000588323 RHOBTB3O94955 611 aa4.9□□□□□ -1.63
VPS4B-203ENST00000588323 RAPGEF3O95398 923 aa4.9□□□□□ -1.63
VPS4B-203ENST00000588323 HNRNPLP14866 589 aaKnown RBP eCLIP4.9□□□□□ -1.63
VPS4B-203ENST00000588323 GNAT2P19087 354 aa4.9□□□□□ -1.63
VPS4B-203ENST00000588323 PTX3P26022 381 aaPredicted RBP4.9□□□□□ -1.63
VPS4B-203ENST00000588323 KIR2DL3P43628 341 aa4.9□□□□□ -1.63
VPS4B-203ENST00000588323 ADCY2Q08462 1091 aa4.9□□□□□ -1.63
VPS4B-203ENST00000588323 ADCY1Q08828 1119 aa4.9□□□□□ -1.63
VPS4B-203ENST00000588323 SPIDRQ14159 915 aa4.9□□□□□ -1.63
VPS4B-203ENST00000588323 MYBPC3Q14896 1274 aa4.9□□□□□ -1.63
VPS4B-203ENST00000588323 TIGD7Q6NT04 549 aaPredicted RBP4.9□□□□□ -1.63
VPS4B-203ENST00000588323 C7orf31Q8N865 590 aa4.9□□□□□ -1.63
VPS4B-203ENST00000588323 ST8SIA2Q92186 375 aa4.9□□□□□ -1.63
VPS4B-203ENST00000588323 LENG9Q96B70 501 aa4.9□□□□□ -1.63
VPS4B-203ENST00000588323 HAPLN2Q9GZV7 340 aa4.9□□□□□ -1.63
VPS4B-203ENST00000588323 POLR2AP24928 1970 aaKnown RBP4.9□□□□□ -1.63
VPS4B-203ENST00000588323 PPFIA4O75335 1185 aa4.89□□□□□ -1.63
VPS4B-203ENST00000588323 APOL3O95236 402 aa4.89□□□□□ -1.63
VPS4B-203ENST00000588323 GCP02774 474 aa4.89□□□□□ -1.63
VPS4B-203ENST00000588323 ASLP04424 464 aa4.89□□□□□ -1.63
VPS4B-203ENST00000588323 COL10A1Q03692 680 aa4.89□□□□□ -1.63
VPS4B-203ENST00000588323 MAN2A1Q16706 1144 aa4.89□□□□□ -1.63
VPS4B-203ENST00000588323 LY6G5CQ5SRR4 150 aa4.89□□□□□ -1.63
VPS4B-203ENST00000588323 C1QL3Q5VWW1 255 aa4.89□□□□□ -1.63
VPS4B-203ENST00000588323 PHYKPLQ8IUZ5 450 aa4.89□□□□□ -1.63
VPS4B-203ENST00000588323 PMFBP1Q8TBY8 1022 aa4.89□□□□□ -1.63
VPS4B-203ENST00000588323 PROKR1Q8TCW9 393 aa4.89□□□□□ -1.63
VPS4B-203ENST00000588323 C8orf37Q96NL8 207 aa4.89□□□□□ -1.63
VPS4B-203ENST00000588323 UIMC1Q96RL1 719 aa4.89□□□□□ -1.63
VPS4B-203ENST00000588323 PITHD1Q9GZP4 211 aaPredicted RBP4.89□□□□□ -1.63
VPS4B-203ENST00000588323 FZD1Q9UP38 647 aa4.89□□□□□ -1.63
VPS4B-203ENST00000588323 TNPO3Q9Y5L0 923 aaKnown RBP4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms