RNA–Protein interactions for RNA: ENST00000585961.1

CLPTM1-204, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 4

Gene CLPTM1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-204ENST00000585961 LPPQ93052 612 aa22.64■■□□□ 1.21
CLPTM1-204ENST00000585961 AIFM3Q96NN9 605 aa22.64■■□□□ 1.21
CLPTM1-204ENST00000585961 FDXACB1Q9BRP7 624 aaPredicted RBP22.64■■□□□ 1.21
CLPTM1-204ENST00000585961 SH3GLB2Q9NR46 395 aa22.64■■□□□ 1.21
CLPTM1-204ENST00000585961 PCDHA4Q9UN74 947 aa22.64■■□□□ 1.21
CLPTM1-204ENST00000585961 SRGAP2BP0DMP2 458 aa22.63■■□□□ 1.21
CLPTM1-204ENST00000585961 ALDH7A1P49419 539 aaKnown RBP22.63■■□□□ 1.21
CLPTM1-204ENST00000585961 TOB2Q14106 344 aaPredicted RBP22.63■■□□□ 1.21
CLPTM1-204ENST00000585961 SLC39A11Q8N1S5 342 aa22.63■■□□□ 1.21
CLPTM1-204ENST00000585961 PRSS33Q8NF86 280 aa22.63■■□□□ 1.21
CLPTM1-204ENST00000585961 AUTS2Q8WXX7 1259 aa22.63■■□□□ 1.21
CLPTM1-204ENST00000585961 NIFKQ9BYG3 293 aaKnown RBP22.63■■□□□ 1.21
CLPTM1-204ENST00000585961 SUCLA2Q9P2R7 463 aaPredicted RBP22.63■■□□□ 1.21
CLPTM1-204ENST00000585961 C2orf71A6NGG8 1288 aa22.62■■□□□ 1.21
CLPTM1-204ENST00000585961 WEE2P0C1S8 567 aa22.62■■□□□ 1.21
CLPTM1-204ENST00000585961 PPM1AP35813 382 aa22.62■■□□□ 1.21
CLPTM1-204ENST00000585961 DNM2P50570 870 aa22.62■■□□□ 1.21
CLPTM1-204ENST00000585961 Q4G0T1 1027 aa22.62■■□□□ 1.21
CLPTM1-204ENST00000585961 XKR3Q5GH77 459 aa22.62■■□□□ 1.21
CLPTM1-204ENST00000585961 RUFY3Q7L099 469 aa22.62■■□□□ 1.21
CLPTM1-204ENST00000585961 ZBTB33Q86T24 672 aa22.62■■□□□ 1.21
CLPTM1-204ENST00000585961 RHPN2Q8IUC4 686 aa22.62■■□□□ 1.21
CLPTM1-204ENST00000585961 SUGP1Q8IWZ8 645 aaKnown RBP22.62■■□□□ 1.21
CLPTM1-204ENST00000585961 TRIM22Q8IYM9 498 aa22.62■■□□□ 1.21
CLPTM1-204ENST00000585961 BLIDQ8IZY5 108 aa22.62■■□□□ 1.21
CLPTM1-204ENST00000585961 ZNF710Q8N1W2 664 aa22.62■■□□□ 1.21
CLPTM1-204ENST00000585961 C12orf76Q8N812 135 aaPredicted RBP22.62■■□□□ 1.21
CLPTM1-204ENST00000585961 CEP89Q96ST8 783 aa22.62■■□□□ 1.21
CLPTM1-204ENST00000585961 DACT1Q9NYF0 836 aa22.62■■□□□ 1.21
CLPTM1-204ENST00000585961 NID2Q14112 1375 aa22.62■■□□□ 1.21
CLPTM1-204ENST00000585961 FSD2A1L4K1 749 aa22.61■■□□□ 1.21
CLPTM1-204ENST00000585961 CLASP2O75122 1294 aaKnown RBP22.61■■□□□ 1.21
CLPTM1-204ENST00000585961 EVCP57679 992 aa22.61■■□□□ 1.21
CLPTM1-204ENST00000585961 SMC1AQ14683 1233 aaKnown RBP22.61■■□□□ 1.21
CLPTM1-204ENST00000585961 TWF2Q6IBS0 349 aaKnown RBP22.61■■□□□ 1.21
CLPTM1-204ENST00000585961 INPP5FQ9Y2H2 1132 aa22.61■■□□□ 1.21
CLPTM1-204ENST00000585961 CYP3A7-CYP3A51PA0A087WV96 503 aa22.6■■□□□ 1.21
CLPTM1-204ENST00000585961 MEIS3P2A8K0S8 358 aa22.6■■□□□ 1.21
CLPTM1-204ENST00000585961 CPLX1O14810 134 aa22.6■■□□□ 1.21
CLPTM1-204ENST00000585961 HOXB8P17481 243 aaPredicted RBP22.6■■□□□ 1.21
CLPTM1-204ENST00000585961 CYP3A7P24462 503 aa22.6■■□□□ 1.21
CLPTM1-204ENST00000585961 PHKA2P46019 1235 aa22.6■■□□□ 1.21
CLPTM1-204ENST00000585961 SIGLEC14Q08ET2 396 aa22.6■■□□□ 1.21
CLPTM1-204ENST00000585961 PLA2G4FQ68DD2 849 aa22.6■■□□□ 1.21
CLPTM1-204ENST00000585961 VPS52Q8N1B4 723 aa22.6■■□□□ 1.21
CLPTM1-204ENST00000585961 FBXL6Q8N531 539 aa22.6■■□□□ 1.21
CLPTM1-204ENST00000585961 TMEM87AQ8NBN3 555 aa22.6■■□□□ 1.21
CLPTM1-204ENST00000585961 SLKQ9H2G2 1235 aaPredicted RBP22.6■■□□□ 1.21
CLPTM1-204ENST00000585961 ZSWIM6Q9HCJ5 1215 aa22.6■■□□□ 1.21
CLPTM1-204ENST00000585961 KCNJ14Q9UNX9 436 aa22.6■■□□□ 1.21
CLPTM1-204ENST00000585961 HCFC2Q9Y5Z7 792 aa22.6■■□□□ 1.21
CLPTM1-204ENST00000585961 PIEZO1Q92508 2521 aa22.6■■□□□ 1.21
CLPTM1-204ENST00000585961 EML1O00423 815 aa22.59■■□□□ 1.21
CLPTM1-204ENST00000585961 ZC3H11AO75152 810 aaKnown RBP eCLIP22.59■■□□□ 1.21
CLPTM1-204ENST00000585961 REC8O95072 547 aa22.59■■□□□ 1.21
CLPTM1-204ENST00000585961 VCPP55072 806 aaKnown RBP22.59■■□□□ 1.21
CLPTM1-204ENST00000585961 PTPN21Q16825 1174 aa22.59■■□□□ 1.21
CLPTM1-204ENST00000585961 TMEM173Q86WV6 379 aaPredicted RBP22.59■■□□□ 1.21
CLPTM1-204ENST00000585961 ZNF579Q8NAF0 562 aaKnown RBP22.59■■□□□ 1.21
CLPTM1-204ENST00000585961 CASP10Q92851 521 aa22.59■■□□□ 1.21
CLPTM1-204ENST00000585961 NLRP4Q96MN2 994 aa22.59■■□□□ 1.21
CLPTM1-204ENST00000585961 GBP3Q9H0R5 595 aa22.59■■□□□ 1.21
CLPTM1-204ENST00000585961 CHST12Q9NRB3 414 aa22.59■■□□□ 1.21
CLPTM1-204ENST00000585961 DDX25Q9UHL0 483 aaKnown RBP22.59■■□□□ 1.21
CLPTM1-204ENST00000585961 PIN4Q9Y237 131 aaKnown RBP22.59■■□□□ 1.21
CLPTM1-204ENST00000585961 IGKV6-21A0A0C4DH24 114 aa22.58■■□□□ 1.21
CLPTM1-204ENST00000585961 M0R2N6 131 aa22.58■■□□□ 1.21
CLPTM1-204ENST00000585961 NPEPPSP55786 919 aa22.58■■□□□ 1.21
CLPTM1-204ENST00000585961 CDC42EP1Q00587 391 aa22.58■■□□□ 1.21
CLPTM1-204ENST00000585961 INF2Q27J81 1249 aa22.58■■□□□ 1.21
CLPTM1-204ENST00000585961 LETM2Q2VYF4 491 aa22.58■■□□□ 1.21
CLPTM1-204ENST00000585961 TPRNQ4KMQ1 711 aa22.58■■□□□ 1.21
CLPTM1-204ENST00000585961 RARS2Q5T160 578 aaKnown RBP22.58■■□□□ 1.21
CLPTM1-204ENST00000585961 CES5AQ6NT32 575 aa22.58■■□□□ 1.21
CLPTM1-204ENST00000585961 B3GNT9Q6UX72 402 aa22.58■■□□□ 1.21
CLPTM1-204ENST00000585961 ANO5Q75V66 913 aa22.58■■□□□ 1.21
CLPTM1-204ENST00000585961 CATSPER4Q7RTX7 472 aa22.58■■□□□ 1.21
CLPTM1-204ENST00000585961 RDM1Q8NG50 284 aa22.58■■□□□ 1.21
CLPTM1-204ENST00000585961 ETNPPLQ8TBG4 499 aa22.58■■□□□ 1.21
CLPTM1-204ENST00000585961 ASIC4Q96FT7 647 aa22.58■■□□□ 1.21
CLPTM1-204ENST00000585961 TMEM169Q96HH4 297 aa22.58■■□□□ 1.21
CLPTM1-204ENST00000585961 C22orf23Q9BZE7 217 aa22.58■■□□□ 1.21
CLPTM1-204ENST00000585961 ADAM7Q9H2U9 754 aa22.58■■□□□ 1.21
CLPTM1-204ENST00000585961 POMKQ9H5K3 350 aa22.58■■□□□ 1.21
CLPTM1-204ENST00000585961 NRDE2Q9H7Z3 1164 aa22.58■■□□□ 1.21
CLPTM1-204ENST00000585961 CYP46A1Q9Y6A2 500 aa22.58■■□□□ 1.21
CLPTM1-204ENST00000585961 SLC37A4O43826 429 aa22.57■■□□□ 1.2
CLPTM1-204ENST00000585961 MAFO75444 373 aaPredicted RBP22.57■■□□□ 1.2
CLPTM1-204ENST00000585961 OFD1O75665 1012 aa22.57■■□□□ 1.2
CLPTM1-204ENST00000585961 DEXIO95424 95 aa22.57■■□□□ 1.2
CLPTM1-204ENST00000585961 PDGFBP01127 241 aaPredicted RBP22.57■■□□□ 1.2
CLPTM1-204ENST00000585961 RNASELQ05823 741 aaKnown RBP22.57■■□□□ 1.2
CLPTM1-204ENST00000585961 BMS1Q14692 1282 aaKnown RBP22.57■■□□□ 1.2
CLPTM1-204ENST00000585961 NPY5RQ15761 445 aa22.57■■□□□ 1.2
CLPTM1-204ENST00000585961 NOMO2Q5JPE7 1267 aa22.57■■□□□ 1.2
CLPTM1-204ENST00000585961 KREMEN2Q8NCW0 462 aa22.57■■□□□ 1.2
CLPTM1-204ENST00000585961 FEZF2Q8TBJ5 459 aa22.57■■□□□ 1.2
CLPTM1-204ENST00000585961 ZNF274Q96GC6 653 aaPredicted RBP22.57■■□□□ 1.2
CLPTM1-204ENST00000585961 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP22.56■■□□□ 1.2
CLPTM1-204ENST00000585961 C2CD4DB7Z1M9 353 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms