RNA–Protein interactions for RNA: ENST00000585941.5

LIG3-205, Transcript of DNA ligase 3, humanhuman

TSL 1 (best)

Gene LIG3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-205ENST00000585941 NIFKQ9BYG3 293 aaKnown RBP15.51■□□□□ 0.07
LIG3-205ENST00000585941 NLRC4Q9NPP4 1024 aa15.51■□□□□ 0.07
LIG3-205ENST00000585941 GPRC5CQ9NQ84 441 aa15.51■□□□□ 0.07
LIG3-205ENST00000585941 NRBP2Q9NSY0 501 aa15.51■□□□□ 0.07
LIG3-205ENST00000585941 TBX20Q9UMR3 447 aa15.51■□□□□ 0.07
LIG3-205ENST00000585941 CTAGE9A4FU28 777 aa15.5■□□□□ 0.07
LIG3-205ENST00000585941 AKR1B10O60218 316 aa15.5■□□□□ 0.07
LIG3-205ENST00000585941 PEX10O60683 326 aa15.5■□□□□ 0.07
LIG3-205ENST00000585941 UCHL3P15374 230 aa15.5■□□□□ 0.07
LIG3-205ENST00000585941 ANXA13P27216 316 aa15.5■□□□□ 0.07
LIG3-205ENST00000585941 EIF4A3P38919 411 aaKnown RBP15.5■□□□□ 0.07
LIG3-205ENST00000585941 RFC5P40937 340 aa15.5■□□□□ 0.07
LIG3-205ENST00000585941 FMO5P49326 533 aa15.5■□□□□ 0.07
LIG3-205ENST00000585941 KIF11P52732 1056 aa15.5■□□□□ 0.07
LIG3-205ENST00000585941 VAV2P52735 878 aa15.5■□□□□ 0.07
LIG3-205ENST00000585941 KIF5AQ12840 1032 aa15.5■□□□□ 0.07
LIG3-205ENST00000585941 HSP90AA2PQ14568 343 aaPredicted RBP15.5■□□□□ 0.07
LIG3-205ENST00000585941 CCDC122Q5T0U0 273 aa15.5■□□□□ 0.07
LIG3-205ENST00000585941 SEPT1Q8WYJ6 367 aa15.5■□□□□ 0.07
LIG3-205ENST00000585941 JAKMIP2Q96AA8 810 aa15.5■□□□□ 0.07
LIG3-205ENST00000585941 FAM167AQ96KS9 214 aa15.5■□□□□ 0.07
LIG3-205ENST00000585941 ASB14A6NK59 587 aa15.49■□□□□ 0.07
LIG3-205ENST00000585941 P4HA2O15460 535 aa15.49■□□□□ 0.07
LIG3-205ENST00000585941 GCLCP48506 637 aaPredicted RBP15.49■□□□□ 0.07
LIG3-205ENST00000585941 MCCD1P59942 119 aaPredicted RBP15.49■□□□□ 0.07
LIG3-205ENST00000585941 CETN1Q12798 172 aa15.49■□□□□ 0.07
LIG3-205ENST00000585941 FSTL1Q12841 308 aa15.49■□□□□ 0.07
LIG3-205ENST00000585941 ASIC2Q16515 512 aa15.49■□□□□ 0.07
LIG3-205ENST00000585941 Q3C1V9 767 aa15.49■□□□□ 0.07
LIG3-205ENST00000585941 TRMT1LQ7Z2T5 733 aaKnown RBP15.49■□□□□ 0.07
LIG3-205ENST00000585941 MTERF4Q7Z6M4 381 aaKnown RBP15.49■□□□□ 0.07
LIG3-205ENST00000585941 EXOC8Q8IYI6 725 aa15.49■□□□□ 0.07
LIG3-205ENST00000585941 GPRC5AQ8NFJ5 357 aa15.49■□□□□ 0.07
LIG3-205ENST00000585941 SH2D3AQ9BRG2 576 aa15.49■□□□□ 0.07
LIG3-205ENST00000585941 GCNT4Q9P109 453 aa15.49■□□□□ 0.07
LIG3-205ENST00000585941 DENND3A2RUS2 1198 aa15.48■□□□□ 0.07
LIG3-205ENST00000585941 RBAK-RBAKDNI3L0D1 243 aa15.48■□□□□ 0.07
LIG3-205ENST00000585941 SLC9A1P19634 815 aa15.48■□□□□ 0.07
LIG3-205ENST00000585941 RFX1P22670 979 aa15.48■□□□□ 0.07
LIG3-205ENST00000585941 POLGP54098 1239 aaPredicted RBP15.48■□□□□ 0.07
LIG3-205ENST00000585941 ENPEPQ07075 957 aa15.48■□□□□ 0.07
LIG3-205ENST00000585941 EMC2Q15006 297 aa15.48■□□□□ 0.07
LIG3-205ENST00000585941 TDRD12Q587J7 1177 aaKnown RBP15.48■□□□□ 0.07
LIG3-205ENST00000585941 MAP1SQ66K74 1059 aaPredicted RBP15.48■□□□□ 0.07
LIG3-205ENST00000585941 HGSNATQ68CP4 663 aa15.48■□□□□ 0.07
LIG3-205ENST00000585941 DPY19L2P1Q6NXN4 242 aa15.48■□□□□ 0.07
LIG3-205ENST00000585941 ANKRD23Q86SG2 305 aa15.48■□□□□ 0.07
LIG3-205ENST00000585941 VTI1AQ96AJ9 217 aa15.48■□□□□ 0.07
LIG3-205ENST00000585941 SPAG5Q96R06 1193 aa15.48■□□□□ 0.07
LIG3-205ENST00000585941 NAPGQ99747 312 aaPredicted RBP15.48■□□□□ 0.07
LIG3-205ENST00000585941 IFIH1Q9BYX4 1025 aaKnown RBP15.48■□□□□ 0.07
LIG3-205ENST00000585941 IKZF4Q9H2S9 585 aa15.48■□□□□ 0.07
LIG3-205ENST00000585941 ZNF408Q9H9D4 720 aa15.48■□□□□ 0.07
LIG3-205ENST00000585941 MLXIPQ9HAP2 919 aa15.48■□□□□ 0.07
LIG3-205ENST00000585941 HSPBP1Q9NZL4 362 aa15.48■□□□□ 0.07
LIG3-205ENST00000585941 ZNF215Q9UL58 517 aaPredicted RBP15.48■□□□□ 0.07
LIG3-205ENST00000585941 GSTTP1A0A1W2PQM5 241 aa15.48■□□□□ 0.07
LIG3-205ENST00000585941 FANCGO15287 622 aa15.48■□□□□ 0.07
LIG3-205ENST00000585941 GGPS1O95749 300 aa15.48■□□□□ 0.07
LIG3-205ENST00000585941 STAT5BP51692 787 aa15.48■□□□□ 0.07
LIG3-205ENST00000585941 MYL7Q01449 175 aa15.48■□□□□ 0.07
LIG3-205ENST00000585941 RAPGEF1Q13905 1077 aa15.48■□□□□ 0.07
LIG3-205ENST00000585941 ASTE1Q2TB18 679 aaPredicted RBP15.48■□□□□ 0.07
LIG3-205ENST00000585941 MTERF2Q49AM1 385 aa15.48■□□□□ 0.07
LIG3-205ENST00000585941 BRDTQ58F21 947 aaPredicted RBP15.48■□□□□ 0.07
LIG3-205ENST00000585941 USP37Q86T82 979 aa15.48■□□□□ 0.07
LIG3-205ENST00000585941 ABRAQ8N0Z2 381 aa15.48■□□□□ 0.07
LIG3-205ENST00000585941 C2orf69Q8N8R5 385 aa15.48■□□□□ 0.07
LIG3-205ENST00000585941 MNS1Q8NEH6 495 aa15.48■□□□□ 0.07
LIG3-205ENST00000585941 SLC7A3Q8WY07 619 aa15.48■□□□□ 0.07
LIG3-205ENST00000585941 MS4A4AQ96JQ5 239 aa15.48■□□□□ 0.07
LIG3-205ENST00000585941 FGD4Q96M96 766 aa15.48■□□□□ 0.07
LIG3-205ENST00000585941 IRX2Q9BZI1 471 aaPredicted RBP15.48■□□□□ 0.07
LIG3-205ENST00000585941 DHX33Q9H6R0 707 aaKnown RBP15.48■□□□□ 0.07
LIG3-205ENST00000585941 AZI2Q9H6S1 392 aa15.48■□□□□ 0.07
LIG3-205ENST00000585941 GBA2Q9HCG7 927 aaPredicted RBP15.48■□□□□ 0.07
LIG3-205ENST00000585941 XPNPEP1Q9NQW7 623 aa15.48■□□□□ 0.07
LIG3-205ENST00000585941 DDX41Q9UJV9 622 aaKnown RBP15.48■□□□□ 0.07
LIG3-205ENST00000585941 GUCA1BQ9UMX6 200 aa15.48■□□□□ 0.07
LIG3-205ENST00000585941 PCDHA13Q9Y5I0 950 aa15.48■□□□□ 0.07
LIG3-205ENST00000585941 MRFAP1Q9Y605 127 aa15.48■□□□□ 0.07
LIG3-205ENST00000585941 PDHXO00330 501 aa15.47■□□□□ 0.07
LIG3-205ENST00000585941 PMM2O15305 246 aa15.47■□□□□ 0.07
LIG3-205ENST00000585941 STRNO43815 780 aa15.47■□□□□ 0.07
LIG3-205ENST00000585941 PGK2P07205 417 aa15.47■□□□□ 0.07
LIG3-205ENST00000585941 PLEKP08567 350 aaPredicted RBP15.47■□□□□ 0.07
LIG3-205ENST00000585941 ZBTB48P10074 688 aaPredicted RBP15.47■□□□□ 0.07
LIG3-205ENST00000585941 ATP4AP20648 1035 aa15.47■□□□□ 0.07
LIG3-205ENST00000585941 VAMP7P51809 220 aa15.47■□□□□ 0.07
LIG3-205ENST00000585941 KLHL30Q0D2K2 578 aa15.47■□□□□ 0.07
LIG3-205ENST00000585941 WDR78Q5VTH9 848 aa15.47■□□□□ 0.07
LIG3-205ENST00000585941 SLC35F6Q8N357 371 aa15.47■□□□□ 0.07
LIG3-205ENST00000585941 POLR3FQ9H1D9 316 aaPredicted RBP15.47■□□□□ 0.07
LIG3-205ENST00000585941 SIX2Q9NPC8 291 aa15.47■□□□□ 0.07
LIG3-205ENST00000585941 ARHGAP28Q9P2N2 729 aa15.47■□□□□ 0.07
LIG3-205ENST00000585941 CCL15-CCL14A0A0B4J2E2 113 aa15.46■□□□□ 0.07
LIG3-205ENST00000585941 A0A0U1RQJ8 604 aa15.46■□□□□ 0.07
LIG3-205ENST00000585941 KIAA0391O15091 583 aaKnown RBP15.46■□□□□ 0.07
LIG3-205ENST00000585941 GAS2O43903 313 aaKnown RBP15.46■□□□□ 0.07
LIG3-205ENST00000585941 TLR2O60603 784 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms