RNA–Protein interactions for RNA: ENST00000584645.1

LIMD2-212, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 566 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-212ENST00000584645 A0A0U1RQF3 1178 aa18.42■□□□□ 0.54
LIMD2-212ENST00000584645 POTEMA6NI47 508 aa18.42■□□□□ 0.54
LIMD2-212ENST00000584645 TBKBP1A7MCY6 615 aa18.42■□□□□ 0.54
LIMD2-212ENST00000584645 EOMESO95936 686 aa18.42■□□□□ 0.54
LIMD2-212ENST00000584645 SKIP12755 728 aa18.42■□□□□ 0.54
LIMD2-212ENST00000584645 MUTP22033 750 aa18.42■□□□□ 0.54
LIMD2-212ENST00000584645 PCBP1Q15365 356 aaKnown RBP eCLIP18.42■□□□□ 0.54
LIMD2-212ENST00000584645 ZNF174Q15697 407 aa18.42■□□□□ 0.54
LIMD2-212ENST00000584645 CCDC43Q96MW1 224 aaKnown RBP18.42■□□□□ 0.54
LIMD2-212ENST00000584645 POLR3CQ9BUI4 534 aaPredicted RBP18.42■□□□□ 0.54
LIMD2-212ENST00000584645 IFT122Q9HBG6 1241 aa18.42■□□□□ 0.54
LIMD2-212ENST00000584645 CD2BP2O95400 341 aaKnown RBP18.41■□□□□ 0.54
LIMD2-212ENST00000584645 RARRES1P49788 294 aa18.41■□□□□ 0.54
LIMD2-212ENST00000584645 GATMP50440 423 aa18.41■□□□□ 0.54
LIMD2-212ENST00000584645 LAMTOR4Q0VGL1 99 aa18.41■□□□□ 0.54
LIMD2-212ENST00000584645 MXD4Q14582 209 aaPredicted RBP18.41■□□□□ 0.54
LIMD2-212ENST00000584645 FAM102BQ5T8I3 360 aa18.41■□□□□ 0.54
LIMD2-212ENST00000584645 HAUS3Q68CZ6 603 aa18.41■□□□□ 0.54
LIMD2-212ENST00000584645 FERMT3Q86UX7 667 aa18.41■□□□□ 0.54
LIMD2-212ENST00000584645 PRPF31Q8WWY3 499 aaKnown RBP18.41■□□□□ 0.54
LIMD2-212ENST00000584645 TMEM143Q96AN5 459 aa18.41■□□□□ 0.54
LIMD2-212ENST00000584645 PLAGL2Q9UPG8 496 aa18.41■□□□□ 0.54
LIMD2-212ENST00000584645 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.41■□□□□ 0.54
LIMD2-212ENST00000584645 PCDHB12Q9Y5F1 795 aa18.41■□□□□ 0.54
LIMD2-212ENST00000584645 STK24Q9Y6E0 443 aa18.41■□□□□ 0.54
LIMD2-212ENST00000584645 LAD1O00515 517 aa18.4■□□□□ 0.54
LIMD2-212ENST00000584645 ZBTB39O15060 712 aa18.4■□□□□ 0.54
LIMD2-212ENST00000584645 GRM6O15303 877 aa18.4■□□□□ 0.54
LIMD2-212ENST00000584645 NCK2O43639 380 aa18.4■□□□□ 0.54
LIMD2-212ENST00000584645 SPATA31C1P0DKV0 1188 aa18.4■□□□□ 0.54
LIMD2-212ENST00000584645 LAG3P18627 525 aa18.4■□□□□ 0.54
LIMD2-212ENST00000584645 IBSPP21815 317 aaPredicted RBP18.4■□□□□ 0.54
LIMD2-212ENST00000584645 FGFR4P22455 802 aa18.4■□□□□ 0.54
LIMD2-212ENST00000584645 RPA1P27694 616 aa18.4■□□□□ 0.54
LIMD2-212ENST00000584645 TECP42680 631 aa18.4■□□□□ 0.54
LIMD2-212ENST00000584645 FXR2P51116 673 aaKnown RBP eCLIP18.4■□□□□ 0.54
LIMD2-212ENST00000584645 RAB27AP51159 221 aa18.4■□□□□ 0.54
LIMD2-212ENST00000584645 POU5F1BQ06416 359 aa18.4■□□□□ 0.54
LIMD2-212ENST00000584645 CATSPER4Q7RTX7 472 aa18.4■□□□□ 0.54
LIMD2-212ENST00000584645 ZNF598Q86UK7 904 aaKnown RBP18.4■□□□□ 0.54
LIMD2-212ENST00000584645 KSR1Q8IVT5 923 aa18.4■□□□□ 0.54
LIMD2-212ENST00000584645 ABI1Q8IZP0 508 aa18.4■□□□□ 0.54
LIMD2-212ENST00000584645 LRRC43Q8N309 656 aa18.4■□□□□ 0.54
LIMD2-212ENST00000584645 XPNPEP1Q9NQW7 623 aa18.4■□□□□ 0.54
LIMD2-212ENST00000584645 AGPAT5Q9NUQ2 364 aa18.4■□□□□ 0.54
LIMD2-212ENST00000584645 RNF19AQ9NV58 838 aa18.4■□□□□ 0.54
LIMD2-212ENST00000584645 DBR1Q9UK59 544 aaKnown RBP18.4■□□□□ 0.54
LIMD2-212ENST00000584645 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.39■□□□□ 0.53
LIMD2-212ENST00000584645 FGFR1P11362 822 aa18.39■□□□□ 0.53
LIMD2-212ENST00000584645 GJB2P29033 226 aa18.39■□□□□ 0.53
LIMD2-212ENST00000584645 PHKA2P46019 1235 aa18.39■□□□□ 0.53
LIMD2-212ENST00000584645 UBE3AQ05086 875 aa18.39■□□□□ 0.53
LIMD2-212ENST00000584645 TFDP1Q14186 410 aa18.39■□□□□ 0.53
LIMD2-212ENST00000584645 COL19A1Q14993 1142 aa18.39■□□□□ 0.53
LIMD2-212ENST00000584645 SPOUT1Q5T280 376 aaKnown RBP18.39■□□□□ 0.53
LIMD2-212ENST00000584645 CATSPER3Q86XQ3 398 aa18.39■□□□□ 0.53
LIMD2-212ENST00000584645 IFNLR1Q8IU57 520 aaPredicted RBP18.39■□□□□ 0.53
LIMD2-212ENST00000584645 C4orf32Q8N8J7 132 aa18.39■□□□□ 0.53
LIMD2-212ENST00000584645 KLHL23Q8NBE8 558 aa18.39■□□□□ 0.53
LIMD2-212ENST00000584645 CASD1Q96PB1 797 aa18.39■□□□□ 0.53
LIMD2-212ENST00000584645 NACC1Q96RE7 527 aa18.39■□□□□ 0.53
LIMD2-212ENST00000584645 MRPL9Q9BYD2 267 aaKnown RBP18.39■□□□□ 0.53
LIMD2-212ENST00000584645 RAB34Q9BZG1 259 aa18.39■□□□□ 0.53
LIMD2-212ENST00000584645 UBE2ZQ9H832 354 aaPredicted RBP18.39■□□□□ 0.53
LIMD2-212ENST00000584645 PIN4Q9Y237 131 aaKnown RBP18.39■□□□□ 0.53
LIMD2-212ENST00000584645 PLXNA4Q9HCM2 1894 aa18.38■□□□□ 0.53
LIMD2-212ENST00000584645 CARNS1A5YM72 827 aa18.38■□□□□ 0.53
LIMD2-212ENST00000584645 ZNF623O75123 536 aa18.38■□□□□ 0.53
LIMD2-212ENST00000584645 MED24O75448 989 aa18.38■□□□□ 0.53
LIMD2-212ENST00000584645 CSDE1O75534 798 aaKnown RBP18.38■□□□□ 0.53
LIMD2-212ENST00000584645 ITGB1P05556 798 aa18.38■□□□□ 0.53
LIMD2-212ENST00000584645 SRGAP2CP0DJJ0 459 aa18.38■□□□□ 0.53
LIMD2-212ENST00000584645 ATF7P17544 494 aaPredicted RBP18.38■□□□□ 0.53
LIMD2-212ENST00000584645 PRPHP41219 470 aa18.38■□□□□ 0.53
LIMD2-212ENST00000584645 TOB1P50616 345 aaPredicted RBP18.38■□□□□ 0.53
LIMD2-212ENST00000584645 TFF2Q03403 129 aa18.38■□□□□ 0.53
LIMD2-212ENST00000584645 RILPL1Q5EBL4 403 aa18.38■□□□□ 0.53
LIMD2-212ENST00000584645 TCEAL5Q5H9L2 206 aa18.38■□□□□ 0.53
LIMD2-212ENST00000584645 TWF2Q6IBS0 349 aaKnown RBP18.38■□□□□ 0.53
LIMD2-212ENST00000584645 RNF149Q8NC42 400 aa18.38■□□□□ 0.53
LIMD2-212ENST00000584645 MCPH1Q8NEM0 835 aa18.38■□□□□ 0.53
LIMD2-212ENST00000584645 SPPL3Q8TCT6 385 aa18.38■□□□□ 0.53
LIMD2-212ENST00000584645 PPP2R3CQ969Q6 453 aa18.38■□□□□ 0.53
LIMD2-212ENST00000584645 NFKBIZQ9BYH8 718 aa18.38■□□□□ 0.53
LIMD2-212ENST00000584645 CWH43Q9H720 699 aa18.38■□□□□ 0.53
LIMD2-212ENST00000584645 BMP2KQ9NSY1 1161 aaPredicted RBP18.38■□□□□ 0.53
LIMD2-212ENST00000584645 TYW1Q9NV66 732 aaKnown RBP18.38■□□□□ 0.53
LIMD2-212ENST00000584645 SMC3Q9UQE7 1217 aa18.38■□□□□ 0.53
LIMD2-212ENST00000584645 H3BQV1 296 aa18.37■□□□□ 0.53
LIMD2-212ENST00000584645 BMP1P13497 986 aa18.37■□□□□ 0.53
LIMD2-212ENST00000584645 AXLP30530 894 aa18.37■□□□□ 0.53
LIMD2-212ENST00000584645 ARL2P36404 184 aa18.37■□□□□ 0.53
LIMD2-212ENST00000584645 PTENP60484 403 aa18.37■□□□□ 0.53
LIMD2-212ENST00000584645 PDIA5Q14554 519 aa18.37■□□□□ 0.53
LIMD2-212ENST00000584645 COLGALT1Q8NBJ5 622 aa18.37■□□□□ 0.53
LIMD2-212ENST00000584645 ADAMTS19Q8TE59 1207 aa18.37■□□□□ 0.53
LIMD2-212ENST00000584645 PIGOQ8TEQ8 1089 aa18.37■□□□□ 0.53
LIMD2-212ENST00000584645 PABPC5Q96DU9 382 aaKnown RBP18.37■□□□□ 0.53
LIMD2-212ENST00000584645 BACH2Q9BYV9 841 aa18.37■□□□□ 0.53
LIMD2-212ENST00000584645 ALG13Q9NP73 1137 aaKnown RBP18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms