RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 TINF2Q9BSI4 451 aa10.19□□□□□ -0.78
SS18-220ENST00000582092 GBP3Q9H0R5 595 aa10.19□□□□□ -0.78
SS18-220ENST00000582092 C11orf49Q9H6J7 331 aa10.19□□□□□ -0.78
SS18-220ENST00000582092 ZNF302Q9NR11 478 aa10.19□□□□□ -0.78
SS18-220ENST00000582092 FLRT1Q9NZU1 646 aa10.19□□□□□ -0.78
SS18-220ENST00000582092 CGNQ9P2M7 1197 aaKnown RBP10.19□□□□□ -0.78
SS18-220ENST00000582092 SEPT9Q9UHD8 586 aaPredicted RBP10.19□□□□□ -0.78
SS18-220ENST00000582092 CAPN11Q9UMQ6 739 aa10.19□□□□□ -0.78
SS18-220ENST00000582092 TRAF3IP3Q9Y228 551 aa10.19□□□□□ -0.78
SS18-220ENST00000582092 PAXBP1Q9Y5B6 917 aa10.19□□□□□ -0.78
SS18-220ENST00000582092 SYNGAP1Q96PV0 1343 aa10.18□□□□□ -0.78
SS18-220ENST00000582092 LOXHD1Q8IVV2 1947 aa10.18□□□□□ -0.78
SS18-220ENST00000582092 LOC102724159A0A0B4J2E5 919 aa10.18□□□□□ -0.78
SS18-220ENST00000582092 KBTBD13C9JR72 458 aa10.18□□□□□ -0.78
SS18-220ENST00000582092 PGK2P07205 417 aa10.18□□□□□ -0.78
SS18-220ENST00000582092 SUPT20HL2P0C7V6 817 aa10.18□□□□□ -0.78
SS18-220ENST00000582092 RARBP10826 455 aa10.18□□□□□ -0.78
SS18-220ENST00000582092 PLS3P13797 630 aa10.18□□□□□ -0.78
SS18-220ENST00000582092 KCNA2P16389 499 aa10.18□□□□□ -0.78
SS18-220ENST00000582092 CYLC1P35663 651 aaPredicted RBP10.18□□□□□ -0.78
SS18-220ENST00000582092 PSMC2P35998 433 aaKnown RBP10.18□□□□□ -0.78
SS18-220ENST00000582092 RARRES1P49788 294 aa10.18□□□□□ -0.78
SS18-220ENST00000582092 HSP90AA2PQ14568 343 aaPredicted RBP10.18□□□□□ -0.78
SS18-220ENST00000582092 PWP2Q15269 919 aaKnown RBP10.18□□□□□ -0.78
SS18-220ENST00000582092 BMT2Q1RMZ1 405 aa10.18□□□□□ -0.78
SS18-220ENST00000582092 XKR3Q5GH77 459 aa10.18□□□□□ -0.78
SS18-220ENST00000582092 UBE2Q1Q7Z7E8 422 aa10.18□□□□□ -0.78
SS18-220ENST00000582092 EXOC8Q8IYI6 725 aa10.18□□□□□ -0.78
SS18-220ENST00000582092 GLIS3Q8NEA6 775 aa10.18□□□□□ -0.78
SS18-220ENST00000582092 KIF18AQ8NI77 898 aa10.18□□□□□ -0.78
SS18-220ENST00000582092 PRIMPOLQ96LW4 560 aa10.18□□□□□ -0.78
SS18-220ENST00000582092 ERGIC2Q96RQ1 377 aa10.18□□□□□ -0.78
SS18-220ENST00000582092 NUCKS1Q9H1E3 243 aaKnown RBP10.18□□□□□ -0.78
SS18-220ENST00000582092 KCTD10Q9H3F6 313 aa10.18□□□□□ -0.78
SS18-220ENST00000582092 TMX1Q9H3N1 280 aa10.18□□□□□ -0.78
SS18-220ENST00000582092 SOWAHBA6NEL2 793 aa10.17□□□□□ -0.78
SS18-220ENST00000582092 DNM1LO00429 736 aa10.17□□□□□ -0.78
SS18-220ENST00000582092 CLIC2O15247 247 aa10.17□□□□□ -0.78
SS18-220ENST00000582092 SLC16A3O15427 465 aaKnown RBP10.17□□□□□ -0.78
SS18-220ENST00000582092 EXOC3O60645 756 aa10.17□□□□□ -0.78
SS18-220ENST00000582092 DGAT1O75907 488 aa10.17□□□□□ -0.78
SS18-220ENST00000582092 CCNE2O96020 404 aa10.17□□□□□ -0.78
SS18-220ENST00000582092 AFPP02771 609 aaKnown RBP10.17□□□□□ -0.78
SS18-220ENST00000582092 GYPCP04921 128 aa10.17□□□□□ -0.78
SS18-220ENST00000582092 AKR1A1P14550 325 aa10.17□□□□□ -0.78
SS18-220ENST00000582092 ZNF131P52739 623 aa10.17□□□□□ -0.78
SS18-220ENST00000582092 POLGP54098 1239 aaPredicted RBP10.17□□□□□ -0.78
SS18-220ENST00000582092 PEX3P56589 373 aa10.17□□□□□ -0.78
SS18-220ENST00000582092 SNRPFP62306 86 aaKnown RBP10.17□□□□□ -0.78
SS18-220ENST00000582092 ZBED6P86452 979 aa10.17□□□□□ -0.78
SS18-220ENST00000582092 CETN1Q12798 172 aa10.17□□□□□ -0.78
SS18-220ENST00000582092 ZCWPW2Q504Y3 356 aa10.17□□□□□ -0.78
SS18-220ENST00000582092 DCAF17Q5H9S7 520 aaPredicted RBP10.17□□□□□ -0.78
SS18-220ENST00000582092 LHX8Q68G74 356 aa10.17□□□□□ -0.78
SS18-220ENST00000582092 LRRC55Q6ZSA7 311 aa10.17□□□□□ -0.78
SS18-220ENST00000582092 EPM2AIP1Q7L775 607 aaPredicted RBP10.17□□□□□ -0.78
SS18-220ENST00000582092 EEPD1Q7L9B9 569 aa10.17□□□□□ -0.78
SS18-220ENST00000582092 DHX37Q8IY37 1157 aaKnown RBP10.17□□□□□ -0.78
SS18-220ENST00000582092 TXLNBQ8N3L3 684 aa10.17□□□□□ -0.78
SS18-220ENST00000582092 FAM133AQ8N9E0 248 aa10.17□□□□□ -0.78
SS18-220ENST00000582092 SEPT1Q8WYJ6 367 aa10.17□□□□□ -0.78
SS18-220ENST00000582092 FAM167AQ96KS9 214 aa10.17□□□□□ -0.78
SS18-220ENST00000582092 ABHD16BQ9H3Z7 469 aa10.17□□□□□ -0.78
SS18-220ENST00000582092 C17orf75Q9HAS0 396 aa10.17□□□□□ -0.78
SS18-220ENST00000582092 ATP6V0A4Q9HBG4 840 aa10.17□□□□□ -0.78
SS18-220ENST00000582092 SPC25Q9HBM1 224 aa10.17□□□□□ -0.78
SS18-220ENST00000582092 KMT5AQ9NQR1 393 aa10.17□□□□□ -0.78
SS18-220ENST00000582092 KCND1Q9NSA2 647 aa10.17□□□□□ -0.78
SS18-220ENST00000582092 ABHD10Q9NUJ1 306 aa10.17□□□□□ -0.78
SS18-220ENST00000582092 WRAP73Q9P2S5 460 aaPredicted RBP10.17□□□□□ -0.78
SS18-220ENST00000582092 PPP2R2CQ9Y2T4 447 aa10.17□□□□□ -0.78
SS18-220ENST00000582092 ALPK3Q96L96 1907 aa10.16□□□□□ -0.78
SS18-220ENST00000582092 DNAJC25-GNG10A0A024R161 153 aa10.16□□□□□ -0.78
SS18-220ENST00000582092 A0A1W2PQJ5 194 aa10.16□□□□□ -0.78
SS18-220ENST00000582092 TTC26A0AVF1 554 aa10.16□□□□□ -0.78
SS18-220ENST00000582092 GGPS1O95749 300 aa10.16□□□□□ -0.78
SS18-220ENST00000582092 MYCNP04198 464 aaPredicted RBP10.16□□□□□ -0.78
SS18-220ENST00000582092 FXR1P51114 621 aaKnown RBP eCLIP10.16□□□□□ -0.78
SS18-220ENST00000582092 CYP2J2P51589 502 aa10.16□□□□□ -0.78
SS18-220ENST00000582092 CASP5P51878 434 aa10.16□□□□□ -0.78
SS18-220ENST00000582092 NPEPPSP55786 919 aa10.16□□□□□ -0.78
SS18-220ENST00000582092 KRT83P78385 493 aa10.16□□□□□ -0.78
SS18-220ENST00000582092 PRKCEQ02156 737 aa10.16□□□□□ -0.78
SS18-220ENST00000582092 STRN3Q13033 797 aa10.16□□□□□ -0.78
SS18-220ENST00000582092 TTLL4Q14679 1199 aa10.16□□□□□ -0.78
SS18-220ENST00000582092 PPP2R5AQ15172 486 aa10.16□□□□□ -0.78
SS18-220ENST00000582092 SPA17Q15506 151 aa10.16□□□□□ -0.78
SS18-220ENST00000582092 UGCGQ16739 394 aa10.16□□□□□ -0.78
SS18-220ENST00000582092 MTERF2Q49AM1 385 aa10.16□□□□□ -0.78
SS18-220ENST00000582092 ARHGAP29Q52LW3 1261 aa10.16□□□□□ -0.78
SS18-220ENST00000582092 ZC2HC1CQ53FD0 456 aaPredicted RBP10.16□□□□□ -0.78
SS18-220ENST00000582092 FIGNQ5HY92 759 aa10.16□□□□□ -0.78
SS18-220ENST00000582092 PLA2G4FQ68DD2 849 aa10.16□□□□□ -0.78
SS18-220ENST00000582092 MAMDC4Q6UXC1 1216 aa10.16□□□□□ -0.78
SS18-220ENST00000582092 ABHD15Q6UXT9 468 aa10.16□□□□□ -0.78
SS18-220ENST00000582092 HAUS6Q7Z4H7 955 aa10.16□□□□□ -0.78
SS18-220ENST00000582092 RNF180Q86T96 592 aa10.16□□□□□ -0.78
SS18-220ENST00000582092 FAM186BQ8IYM0 893 aa10.16□□□□□ -0.78
SS18-220ENST00000582092 GLG1Q92896 1179 aa10.16□□□□□ -0.78
SS18-220ENST00000582092 HVCN1Q96D96 273 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms