RNA–Protein interactions for RNA: ENST00000580391.5

CDK5RAP3-218, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,957 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-218ENST00000580391 ADCYAP1R1P41586 468 aa16.25■□□□□ 0.19
CDK5RAP3-218ENST00000580391 RTP1P59025 263 aa16.25■□□□□ 0.19
CDK5RAP3-218ENST00000580391 ARHGAP1Q07960 439 aa16.25■□□□□ 0.19
CDK5RAP3-218ENST00000580391 MAMDC4Q6UXC1 1216 aa16.25■□□□□ 0.19
CDK5RAP3-218ENST00000580391 NYAP1Q6ZVC0 841 aa16.25■□□□□ 0.19
CDK5RAP3-218ENST00000580391 SLC9A9Q8IVB4 645 aa16.25■□□□□ 0.19
CDK5RAP3-218ENST00000580391 SLC17A8Q8NDX2 589 aa16.25■□□□□ 0.19
CDK5RAP3-218ENST00000580391 ASAP3Q8TDY4 903 aa16.25■□□□□ 0.19
CDK5RAP3-218ENST00000580391 LSM14BQ9BX40 385 aaKnown RBP16.25■□□□□ 0.19
CDK5RAP3-218ENST00000580391 PCIF1Q9H4Z3 704 aa16.25■□□□□ 0.19
CDK5RAP3-218ENST00000580391 TBX20Q9UMR3 447 aa16.25■□□□□ 0.19
CDK5RAP3-218ENST00000580391 PPP2R2CQ9Y2T4 447 aa16.25■□□□□ 0.19
CDK5RAP3-218ENST00000580391 TLL2Q9Y6L7 1015 aa16.25■□□□□ 0.19
CDK5RAP3-218ENST00000580391 ZBED6P86452 979 aa16.24■□□□□ 0.19
CDK5RAP3-218ENST00000580391 APBA1Q02410 837 aa16.24■□□□□ 0.19
CDK5RAP3-218ENST00000580391 PPP2R3AQ06190 1150 aa16.24■□□□□ 0.19
CDK5RAP3-218ENST00000580391 WDR59Q6PJI9 974 aa16.24■□□□□ 0.19
CDK5RAP3-218ENST00000580391 IFNL1Q8IU54 200 aa16.24■□□□□ 0.19
CDK5RAP3-218ENST00000580391 SLC7A3Q8WY07 619 aa16.24■□□□□ 0.19
CDK5RAP3-218ENST00000580391 HVCN1Q96D96 273 aa16.24■□□□□ 0.19
CDK5RAP3-218ENST00000580391 FAM167AQ96KS9 214 aa16.24■□□□□ 0.19
CDK5RAP3-218ENST00000580391 CHP1Q99653 195 aa16.24■□□□□ 0.19
CDK5RAP3-218ENST00000580391 ZCCHC17Q9NP64 241 aaKnown RBP16.24■□□□□ 0.19
CDK5RAP3-218ENST00000580391 NRBP2Q9NSY0 501 aa16.24■□□□□ 0.19
CDK5RAP3-218ENST00000580391 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.24■□□□□ 0.19
CDK5RAP3-218ENST00000580391 SLC15A5A6NIM6 579 aa16.24■□□□□ 0.19
CDK5RAP3-218ENST00000580391 FAM155AB1AL88 458 aaPredicted RBP16.24■□□□□ 0.19
CDK5RAP3-218ENST00000580391 EXOC3O60645 756 aa16.24■□□□□ 0.19
CDK5RAP3-218ENST00000580391 TNNT1P13805 278 aa16.24■□□□□ 0.19
CDK5RAP3-218ENST00000580391 CYP26C1Q6V0L0 522 aa16.24■□□□□ 0.19
CDK5RAP3-218ENST00000580391 TAS1R3Q7RTX0 852 aa16.24■□□□□ 0.19
CDK5RAP3-218ENST00000580391 TMTC1Q8IUR5 882 aa16.24■□□□□ 0.19
CDK5RAP3-218ENST00000580391 REXO1L1PQ8IX06 675 aa16.24■□□□□ 0.19
CDK5RAP3-218ENST00000580391 C12orf56Q8IXR9 622 aa16.24■□□□□ 0.19
CDK5RAP3-218ENST00000580391 ZSWIM2Q8NEG5 633 aa16.24■□□□□ 0.19
CDK5RAP3-218ENST00000580391 NEK11Q8NG66 645 aa16.24■□□□□ 0.19
CDK5RAP3-218ENST00000580391 IFT74Q96LB3 600 aa16.24■□□□□ 0.19
CDK5RAP3-218ENST00000580391 NTPCRQ9BSD7 190 aaKnown RBP16.24■□□□□ 0.19
CDK5RAP3-218ENST00000580391 ARHGAP28Q9P2N2 729 aa16.24■□□□□ 0.19
CDK5RAP3-218ENST00000580391 FRMD4BQ9Y2L6 1034 aa16.24■□□□□ 0.19
CDK5RAP3-218ENST00000580391 RBM47A0AV96 593 aaKnown RBP16.23■□□□□ 0.19
CDK5RAP3-218ENST00000580391 ANKRD63C9JTQ0 380 aa16.23■□□□□ 0.19
CDK5RAP3-218ENST00000580391 NOL4O94818 638 aa16.23■□□□□ 0.19
CDK5RAP3-218ENST00000580391 GLRA2P23416 452 aa16.23■□□□□ 0.19
CDK5RAP3-218ENST00000580391 RFC5P40937 340 aa16.23■□□□□ 0.19
CDK5RAP3-218ENST00000580391 PLCB4Q15147 1175 aa16.23■□□□□ 0.19
CDK5RAP3-218ENST00000580391 MEA1Q16626 185 aa16.23■□□□□ 0.19
CDK5RAP3-218ENST00000580391 BBXQ8WY36 941 aaPredicted RBP16.23■□□□□ 0.19
CDK5RAP3-218ENST00000580391 IQCDQ96DY2 449 aa16.23■□□□□ 0.19
CDK5RAP3-218ENST00000580391 TINF2Q9BSI4 451 aa16.23■□□□□ 0.19
CDK5RAP3-218ENST00000580391 R3HCC1Q9Y3T6 440 aaKnown RBP16.23■□□□□ 0.19
CDK5RAP3-218ENST00000580391 GH1P01241 217 aa16.22■□□□□ 0.19
CDK5RAP3-218ENST00000580391 TRIM49P0CI25 452 aa16.22■□□□□ 0.19
CDK5RAP3-218ENST00000580391 TRIM49CP0CI26 452 aa16.22■□□□□ 0.19
CDK5RAP3-218ENST00000580391 ARL2P36404 184 aa16.22■□□□□ 0.19
CDK5RAP3-218ENST00000580391 DRP2Q13474 957 aa16.22■□□□□ 0.19
CDK5RAP3-218ENST00000580391 MYBPC2Q14324 1141 aa16.22■□□□□ 0.19
CDK5RAP3-218ENST00000580391 PTPN14Q15678 1187 aa16.22■□□□□ 0.19
CDK5RAP3-218ENST00000580391 SLC39A4Q6P5W5 647 aa16.22■□□□□ 0.19
CDK5RAP3-218ENST00000580391 PLPPR4Q7Z2D5 763 aa16.22■□□□□ 0.19
CDK5RAP3-218ENST00000580391 GPIHBP1Q8IV16 184 aa16.22■□□□□ 0.19
CDK5RAP3-218ENST00000580391 RDH13Q8NBN7 331 aa16.22■□□□□ 0.19
CDK5RAP3-218ENST00000580391 ATP8B4Q8TF62 1192 aa16.22■□□□□ 0.19
CDK5RAP3-218ENST00000580391 BAP1Q92560 729 aa16.22■□□□□ 0.19
CDK5RAP3-218ENST00000580391 GPBP1L1Q9HC44 474 aaPredicted RBP16.22■□□□□ 0.19
CDK5RAP3-218ENST00000580391 HSPBP1Q9NZL4 362 aa16.22■□□□□ 0.19
CDK5RAP3-218ENST00000580391 CGNQ9P2M7 1197 aaKnown RBP16.22■□□□□ 0.19
CDK5RAP3-218ENST00000580391 ABT1Q9ULW3 272 aaKnown RBP16.22■□□□□ 0.19
CDK5RAP3-218ENST00000580391 EXOC7Q9UPT5 735 aa16.22■□□□□ 0.19
CDK5RAP3-218ENST00000580391 KAT6AQ92794 2004 aa16.22■□□□□ 0.19
CDK5RAP3-218ENST00000580391 ZBTB42B2RXF5 422 aa16.22■□□□□ 0.19
CDK5RAP3-218ENST00000580391 CCP110O43303 1012 aa16.22■□□□□ 0.19
CDK5RAP3-218ENST00000580391 MORN1Q5T089 497 aa16.22■□□□□ 0.19
CDK5RAP3-218ENST00000580391 C17orf99Q6UX52 265 aa16.22■□□□□ 0.19
CDK5RAP3-218ENST00000580391 ACRBPQ8NEB7 543 aa16.22■□□□□ 0.19
CDK5RAP3-218ENST00000580391 ZIC5Q96T25 663 aa16.22■□□□□ 0.19
CDK5RAP3-218ENST00000580391 GANQ9H2C0 597 aa16.22■□□□□ 0.19
CDK5RAP3-218ENST00000580391 NLRC4Q9NPP4 1024 aa16.22■□□□□ 0.19
CDK5RAP3-218ENST00000580391 ZHX1Q9UKY1 873 aaPredicted RBP16.22■□□□□ 0.19
CDK5RAP3-218ENST00000580391 ADGRG1Q9Y653 693 aa16.22■□□□□ 0.19
CDK5RAP3-218ENST00000580391 LRRC53A6NM62 1247 aa16.21■□□□□ 0.19
CDK5RAP3-218ENST00000580391 KIF3CO14782 793 aa16.21■□□□□ 0.19
CDK5RAP3-218ENST00000580391 ZSCAN12O43309 604 aa16.21■□□□□ 0.19
CDK5RAP3-218ENST00000580391 TLR2O60603 784 aa16.21■□□□□ 0.19
CDK5RAP3-218ENST00000580391 MAFO75444 373 aaPredicted RBP16.21■□□□□ 0.19
CDK5RAP3-218ENST00000580391 ADSSP30520 456 aa16.21■□□□□ 0.19
CDK5RAP3-218ENST00000580391 BFSP1Q12934 665 aa16.21■□□□□ 0.19
CDK5RAP3-218ENST00000580391 LAMC2Q13753 1193 aa16.21■□□□□ 0.19
CDK5RAP3-218ENST00000580391 ZNF397Q8NF99 534 aaPredicted RBP16.21■□□□□ 0.19
CDK5RAP3-218ENST00000580391 TMEM174Q8WUU8 243 aa16.21■□□□□ 0.19
CDK5RAP3-218ENST00000580391 TRAPPC12Q8WVT3 735 aa16.21■□□□□ 0.19
CDK5RAP3-218ENST00000580391 CEP72Q9P209 647 aa16.21■□□□□ 0.19
CDK5RAP3-218ENST00000580391 TRPC6Q9Y210 931 aa16.21■□□□□ 0.19
CDK5RAP3-218ENST00000580391 PCNTO95613 3336 aa16.21■□□□□ 0.19
CDK5RAP3-218ENST00000580391 A0A0U1RQJ8 604 aa16.2■□□□□ 0.18
CDK5RAP3-218ENST00000580391 LRRIQ4A6NIV6 560 aa16.2■□□□□ 0.18
CDK5RAP3-218ENST00000580391 ADCY6O43306 1168 aa16.2■□□□□ 0.18
CDK5RAP3-218ENST00000580391 LGALS2P05162 132 aa16.2■□□□□ 0.18
CDK5RAP3-218ENST00000580391 CCDC175P0C221 793 aa16.2■□□□□ 0.18
CDK5RAP3-218ENST00000580391 ACTN1P12814 892 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms