RNA–Protein interactions for RNA: ENST00000574294.5

TVP23B-207, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 5

Gene TVP23B, Length 1,049 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-207ENST00000574294 SLITRK3O94933 977 aa18.42■□□□□ 0.54
TVP23B-207ENST00000574294 TXKP42681 527 aa18.42■□□□□ 0.54
TVP23B-207ENST00000574294 MCM2P49736 904 aa18.42■□□□□ 0.54
TVP23B-207ENST00000574294 FOSBP53539 338 aa18.42■□□□□ 0.54
TVP23B-207ENST00000574294 NPEPPSP55786 919 aa18.42■□□□□ 0.54
TVP23B-207ENST00000574294 COL19A1Q14993 1142 aa18.42■□□□□ 0.54
TVP23B-207ENST00000574294 SRGAP1Q7Z6B7 1085 aa18.42■□□□□ 0.54
TVP23B-207ENST00000574294 ECHDC2Q86YB7 292 aa18.42■□□□□ 0.54
TVP23B-207ENST00000574294 CCDC43Q96MW1 224 aaKnown RBP18.42■□□□□ 0.54
TVP23B-207ENST00000574294 SH2D3AQ9BRG2 576 aa18.42■□□□□ 0.54
TVP23B-207ENST00000574294 FDXACB1Q9BRP7 624 aaPredicted RBP18.42■□□□□ 0.54
TVP23B-207ENST00000574294 NOL7Q9UMY1 257 aaKnown RBP18.42■□□□□ 0.54
TVP23B-207ENST00000574294 VCANP13611 3396 aa18.42■□□□□ 0.54
TVP23B-207ENST00000574294 KIAA1671Q9BY89 1806 aa18.42■□□□□ 0.54
TVP23B-207ENST00000574294 FSD2A1L4K1 749 aa18.41■□□□□ 0.54
TVP23B-207ENST00000574294 GRM6O15303 877 aa18.41■□□□□ 0.54
TVP23B-207ENST00000574294 DGAT1O75907 488 aa18.41■□□□□ 0.54
TVP23B-207ENST00000574294 LAG3P18627 525 aa18.41■□□□□ 0.54
TVP23B-207ENST00000574294 MCM7P33993 719 aa18.41■□□□□ 0.54
TVP23B-207ENST00000574294 RAB27AP51159 221 aa18.41■□□□□ 0.54
TVP23B-207ENST00000574294 CYP4A11Q02928 519 aa18.41■□□□□ 0.54
TVP23B-207ENST00000574294 CTTNQ14247 550 aaKnown RBP18.41■□□□□ 0.54
TVP23B-207ENST00000574294 MXD4Q14582 209 aaPredicted RBP18.41■□□□□ 0.54
TVP23B-207ENST00000574294 LEXMQ3ZCV2 418 aa18.41■□□□□ 0.54
TVP23B-207ENST00000574294 TCEAL5Q5H9L2 206 aa18.41■□□□□ 0.54
TVP23B-207ENST00000574294 SPOUT1Q5T280 376 aaKnown RBP18.41■□□□□ 0.54
TVP23B-207ENST00000574294 FAM102BQ5T8I3 360 aa18.41■□□□□ 0.54
TVP23B-207ENST00000574294 NOSTRINQ8IVI9 506 aa18.41■□□□□ 0.54
TVP23B-207ENST00000574294 ERMNQ8TAM6 284 aa18.41■□□□□ 0.54
TVP23B-207ENST00000574294 PABPC5Q96DU9 382 aaKnown RBP18.41■□□□□ 0.54
TVP23B-207ENST00000574294 NLRP4Q96MN2 994 aa18.41■□□□□ 0.54
TVP23B-207ENST00000574294 MRPL9Q9BYD2 267 aaKnown RBP18.41■□□□□ 0.54
TVP23B-207ENST00000574294 WRAP73Q9P2S5 460 aaPredicted RBP18.41■□□□□ 0.54
TVP23B-207ENST00000574294 FAM50BQ9Y247 325 aa18.41■□□□□ 0.54
TVP23B-207ENST00000574294 ARID2Q68CP9 1835 aa18.4■□□□□ 0.54
TVP23B-207ENST00000574294 IBSPP21815 317 aaPredicted RBP18.4■□□□□ 0.54
TVP23B-207ENST00000574294 PPM1AP35813 382 aa18.4■□□□□ 0.54
TVP23B-207ENST00000574294 KCNQ1P51787 676 aa18.4■□□□□ 0.54
TVP23B-207ENST00000574294 GUCY1B3Q02153 619 aa18.4■□□□□ 0.54
TVP23B-207ENST00000574294 POU5F1BQ06416 359 aa18.4■□□□□ 0.54
TVP23B-207ENST00000574294 EMC2Q15006 297 aa18.4■□□□□ 0.54
TVP23B-207ENST00000574294 PDE12Q6L8Q7 609 aaKnown RBP18.4■□□□□ 0.54
TVP23B-207ENST00000574294 CATSPER4Q7RTX7 472 aa18.4■□□□□ 0.54
TVP23B-207ENST00000574294 LRRC43Q8N309 656 aa18.4■□□□□ 0.54
TVP23B-207ENST00000574294 KLHL23Q8NBE8 558 aa18.4■□□□□ 0.54
TVP23B-207ENST00000574294 SPPL3Q8TCT6 385 aa18.4■□□□□ 0.54
TVP23B-207ENST00000574294 PRPF31Q8WWY3 499 aaKnown RBP18.4■□□□□ 0.54
TVP23B-207ENST00000574294 ZNF668Q96K58 619 aaPredicted RBP18.4■□□□□ 0.54
TVP23B-207ENST00000574294 MTRQ99707 1265 aa18.4■□□□□ 0.54
TVP23B-207ENST00000574294 ALG13Q9NP73 1137 aaKnown RBP18.4■□□□□ 0.54
TVP23B-207ENST00000574294 TCF20Q9UGU0 1960 aaKnown RBP18.4■□□□□ 0.54
TVP23B-207ENST00000574294 ITGB1P05556 798 aa18.39■□□□□ 0.53
TVP23B-207ENST00000574294 MUTP22033 750 aa18.39■□□□□ 0.53
TVP23B-207ENST00000574294 PHKA2P46019 1235 aa18.39■□□□□ 0.53
TVP23B-207ENST00000574294 LAMTOR4Q0VGL1 99 aa18.39■□□□□ 0.53
TVP23B-207ENST00000574294 TFDP1Q14186 410 aa18.39■□□□□ 0.53
TVP23B-207ENST00000574294 TWF2Q6IBS0 349 aaKnown RBP18.39■□□□□ 0.53
TVP23B-207ENST00000574294 ZNF598Q86UK7 904 aaKnown RBP18.39■□□□□ 0.53
TVP23B-207ENST00000574294 FERMT3Q86UX7 667 aa18.39■□□□□ 0.53
TVP23B-207ENST00000574294 IFT122Q9HBG6 1241 aa18.39■□□□□ 0.53
TVP23B-207ENST00000574294 TUFT1Q9NNX1 390 aa18.39■□□□□ 0.53
TVP23B-207ENST00000574294 TYW1Q9NV66 732 aaKnown RBP18.39■□□□□ 0.53
TVP23B-207ENST00000574294 LZTS1Q9Y250 596 aa18.39■□□□□ 0.53
TVP23B-207ENST00000574294 STK24Q9Y6E0 443 aa18.39■□□□□ 0.53
TVP23B-207ENST00000574294 ZNF623O75123 536 aa18.38■□□□□ 0.53
TVP23B-207ENST00000574294 OR52Z1P0C646 297 aa18.38■□□□□ 0.53
TVP23B-207ENST00000574294 FGFR1P11362 822 aa18.38■□□□□ 0.53
TVP23B-207ENST00000574294 ATP2B1P20020 1258 aa18.38■□□□□ 0.53
TVP23B-207ENST00000574294 KCNA5P22460 613 aa18.38■□□□□ 0.53
TVP23B-207ENST00000574294 U2AF2P26368 475 aaKnown RBP eCLIP18.38■□□□□ 0.53
TVP23B-207ENST00000574294 GATMP50440 423 aa18.38■□□□□ 0.53
TVP23B-207ENST00000574294 NCBP1Q09161 790 aaKnown RBP18.38■□□□□ 0.53
TVP23B-207ENST00000574294 TTC38Q5R3I4 469 aa18.38■□□□□ 0.53
TVP23B-207ENST00000574294 ZNF579Q8NAF0 562 aaKnown RBP18.38■□□□□ 0.53
TVP23B-207ENST00000574294 PGBD4Q96DM1 585 aa18.38■□□□□ 0.53
TVP23B-207ENST00000574294 CASD1Q96PB1 797 aa18.38■□□□□ 0.53
TVP23B-207ENST00000574294 POLR3CQ9BUI4 534 aaPredicted RBP18.38■□□□□ 0.53
TVP23B-207ENST00000574294 DAXXQ9UER7 740 aaPredicted RBP18.38■□□□□ 0.53
TVP23B-207ENST00000574294 PUF60Q9UHX1 559 aaKnown RBP18.38■□□□□ 0.53
TVP23B-207ENST00000574294 PIN4Q9Y237 131 aaKnown RBP18.38■□□□□ 0.53
TVP23B-207ENST00000574294 LAD1O00515 517 aa18.37■□□□□ 0.53
TVP23B-207ENST00000574294 WNT7AO00755 349 aa18.37■□□□□ 0.53
TVP23B-207ENST00000574294 CSDE1O75534 798 aaKnown RBP18.37■□□□□ 0.53
TVP23B-207ENST00000574294 SRGAP2CP0DJJ0 459 aa18.37■□□□□ 0.53
TVP23B-207ENST00000574294 FGFR4P22455 802 aa18.37■□□□□ 0.53
TVP23B-207ENST00000574294 AXLP30530 894 aa18.37■□□□□ 0.53
TVP23B-207ENST00000574294 HAUS3Q68CZ6 603 aa18.37■□□□□ 0.53
TVP23B-207ENST00000574294 KSR1Q8IVT5 923 aa18.37■□□□□ 0.53
TVP23B-207ENST00000574294 THNSL1Q8IYQ7 743 aa18.37■□□□□ 0.53
TVP23B-207ENST00000574294 COLGALT1Q8NBJ5 622 aa18.37■□□□□ 0.53
TVP23B-207ENST00000574294 RNF169Q8NCN4 708 aa18.37■□□□□ 0.53
TVP23B-207ENST00000574294 POF1BQ8WVV4 589 aa18.37■□□□□ 0.53
TVP23B-207ENST00000574294 TMEM143Q96AN5 459 aa18.37■□□□□ 0.53
TVP23B-207ENST00000574294 NACC1Q96RE7 527 aa18.37■□□□□ 0.53
TVP23B-207ENST00000574294 RAB34Q9BZG1 259 aa18.37■□□□□ 0.53
TVP23B-207ENST00000574294 TMEM60Q9H2L4 133 aa18.37■□□□□ 0.53
TVP23B-207ENST00000574294 CWH43Q9H720 699 aa18.37■□□□□ 0.53
TVP23B-207ENST00000574294 AGPAT5Q9NUQ2 364 aa18.37■□□□□ 0.53
TVP23B-207ENST00000574294 POTEMA6NI47 508 aa18.36■□□□□ 0.53
TVP23B-207ENST00000574294 FGF18O76093 207 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms