RNA–Protein interactions for RNA: ENST00000573474.5

CCDC40-209, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 554 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-209ENST00000573474 MXD4Q14582 209 aaPredicted RBP15.06■□□□□ 0
CCDC40-209ENST00000573474 MFSD10Q14728 455 aa15.06■□□□□ 0
CCDC40-209ENST00000573474 GRIK4Q16099 956 aa15.06■□□□□ 0
CCDC40-209ENST00000573474 KIAA0753Q2KHM9 967 aa15.06■□□□□ 0
CCDC40-209ENST00000573474 EDRF1Q3B7T1 1238 aa15.06■□□□□ 0
CCDC40-209ENST00000573474 HSP90AA4PQ58FG1 418 aa15.06■□□□□ 0
CCDC40-209ENST00000573474 GNASQ5JWF2 1037 aa15.06■□□□□ 0
CCDC40-209ENST00000573474 EFCAB12Q6NXP0 572 aa15.06■□□□□ 0
CCDC40-209ENST00000573474 DNAJC5GQ8N7S2 189 aa15.06■□□□□ 0
CCDC40-209ENST00000573474 ANKRD20A12PQ8NF67 263 aa15.06■□□□□ 0
CCDC40-209ENST00000573474 GOLGA5Q8TBA6 731 aa15.06■□□□□ 0
CCDC40-209ENST00000573474 ASAP3Q8TDY4 903 aa15.06■□□□□ 0
CCDC40-209ENST00000573474 PSPC1Q8WXF1 523 aaKnown RBP15.06■□□□□ 0
CCDC40-209ENST00000573474 KCNN1Q92952 543 aa15.06■□□□□ 0
CCDC40-209ENST00000573474 XPNPEP3Q9NQH7 507 aa15.06■□□□□ 0
CCDC40-209ENST00000573474 SUCLA2Q9P2R7 463 aaPredicted RBP15.06■□□□□ 0
CCDC40-209ENST00000573474 MAGEC2Q9UBF1 373 aaPredicted RBP15.06■□□□□ 0
CCDC40-209ENST00000573474 KCNJ18B7U540 433 aa15.05■□□□□ -0
CCDC40-209ENST00000573474 ASAP2O43150 1006 aa15.05■□□□□ -0
CCDC40-209ENST00000573474 INHAP05111 366 aa15.05■□□□□ -0
CCDC40-209ENST00000573474 RPL13P26373 211 aaKnown RBP15.05■□□□□ -0
CCDC40-209ENST00000573474 EEF1GP26641 437 aaKnown RBP15.05■□□□□ -0
CCDC40-209ENST00000573474 UBASH3AP57075 661 aa15.05■□□□□ -0
CCDC40-209ENST00000573474 PURAQ00577 322 aaKnown RBP15.05■□□□□ -0
CCDC40-209ENST00000573474 KCNA1Q09470 495 aa15.05■□□□□ -0
CCDC40-209ENST00000573474 CCDC173Q0VFZ6 552 aa15.05■□□□□ -0
CCDC40-209ENST00000573474 MKRN4PQ13434 485 aaPredicted RBP15.05■□□□□ -0
CCDC40-209ENST00000573474 KCNJ12Q14500 433 aa15.05■□□□□ -0
CCDC40-209ENST00000573474 NFIL3Q16649 462 aa15.05■□□□□ -0
CCDC40-209ENST00000573474 TCP11X2Q5H9J9 407 aa15.05■□□□□ -0
CCDC40-209ENST00000573474 MTHFD1LQ6UB35 978 aa15.05■□□□□ -0
CCDC40-209ENST00000573474 HS2ST1Q7LGA3 356 aa15.05■□□□□ -0
CCDC40-209ENST00000573474 IRF2BP1Q8IU81 584 aa15.05■□□□□ -0
CCDC40-209ENST00000573474 KSR1Q8IVT5 923 aa15.05■□□□□ -0
CCDC40-209ENST00000573474 ZC3H3Q8IXZ2 948 aaKnown RBP15.05■□□□□ -0
CCDC40-209ENST00000573474 SYCP3Q8IZU3 236 aa15.05■□□□□ -0
CCDC40-209ENST00000573474 LRRC71Q8N4P6 559 aa15.05■□□□□ -0
CCDC40-209ENST00000573474 DEPTORQ8TB45 409 aa15.05■□□□□ -0
CCDC40-209ENST00000573474 PRPF31Q8WWY3 499 aaKnown RBP15.05■□□□□ -0
CCDC40-209ENST00000573474 CEP63Q96MT8 703 aa15.05■□□□□ -0
CCDC40-209ENST00000573474 CTAGE1Q96RT6 745 aa15.05■□□□□ -0
CCDC40-209ENST00000573474 MTG1Q9BT17 334 aaPredicted RBP15.05■□□□□ -0
CCDC40-209ENST00000573474 GBP3Q9H0R5 595 aa15.05■□□□□ -0
CCDC40-209ENST00000573474 IFNKQ9P0W0 207 aa15.05■□□□□ -0
CCDC40-209ENST00000573474 CGNQ9P2M7 1197 aaKnown RBP15.05■□□□□ -0
CCDC40-209ENST00000573474 LIMA1Q9UHB6 759 aaKnown RBP15.05■□□□□ -0
CCDC40-209ENST00000573474 DDX20Q9UHI6 824 aaKnown RBP15.05■□□□□ -0
CCDC40-209ENST00000573474 TBX20Q9UMR3 447 aa15.05■□□□□ -0
CCDC40-209ENST00000573474 EXOC7Q9UPT5 735 aa15.05■□□□□ -0
CCDC40-209ENST00000573474 PTCH2Q9Y6C5 1203 aa15.05■□□□□ -0
CCDC40-209ENST00000573474 MYH11P35749 1972 aa15.04■□□□□ -0
CCDC40-209ENST00000573474 ZMYM2Q9UBW7 1377 aa15.04■□□□□ -0
CCDC40-209ENST00000573474 NRCAMQ92823 1304 aa15.04■□□□□ -0
CCDC40-209ENST00000573474 DENND3A2RUS2 1198 aa15.04■□□□□ -0
CCDC40-209ENST00000573474 MYADML2A6NDP7 307 aa15.04■□□□□ -0
CCDC40-209ENST00000573474 LRRC10BA6NIK2 292 aa15.04■□□□□ -0
CCDC40-209ENST00000573474 CETN3O15182 167 aa15.04■□□□□ -0
CCDC40-209ENST00000573474 TGFB1I1O43294 461 aa15.04■□□□□ -0
CCDC40-209ENST00000573474 MSCO60682 206 aa15.04■□□□□ -0
CCDC40-209ENST00000573474 ADAMTS4O75173 837 aa15.04■□□□□ -0
CCDC40-209ENST00000573474 GNA14O95837 355 aa15.04■□□□□ -0
CCDC40-209ENST00000573474 PGK1P00558 417 aa15.04■□□□□ -0
CCDC40-209ENST00000573474 SMIM10L2AP0DMW4 78 aa15.04■□□□□ -0
CCDC40-209ENST00000573474 SMIM10L2BP0DMW5 78 aa15.04■□□□□ -0
CCDC40-209ENST00000573474 TMOD1P28289 359 aa15.04■□□□□ -0
CCDC40-209ENST00000573474 SNRPFP62306 86 aaKnown RBP15.04■□□□□ -0
CCDC40-209ENST00000573474 LAMTOR4Q0VGL1 99 aa15.04■□□□□ -0
CCDC40-209ENST00000573474 ADAM9Q13443 819 aa15.04■□□□□ -0
CCDC40-209ENST00000573474 DRP2Q13474 957 aa15.04■□□□□ -0
CCDC40-209ENST00000573474 LRRC55Q6ZSA7 311 aa15.04■□□□□ -0
CCDC40-209ENST00000573474 FILIP1Q7Z7B0 1213 aa15.04■□□□□ -0
CCDC40-209ENST00000573474 METTL13Q8N6R0 699 aa15.04■□□□□ -0
CCDC40-209ENST00000573474 LINC01465Q8N7H1 131 aa15.04■□□□□ -0
CCDC40-209ENST00000573474 KLHDC9Q8NEP7 349 aa15.04■□□□□ -0
CCDC40-209ENST00000573474 MRFAP1L1Q96HT8 127 aa15.04■□□□□ -0
CCDC40-209ENST00000573474 PDLIM2Q96JY6 352 aa15.04■□□□□ -0
CCDC40-209ENST00000573474 PPP1R9BQ96SB3 815 aa15.04■□□□□ -0
CCDC40-209ENST00000573474 KIFC3Q9BVG8 833 aa15.04■□□□□ -0
CCDC40-209ENST00000573474 HMX1Q9NP08 348 aaPredicted RBP15.04■□□□□ -0
CCDC40-209ENST00000573474 ARHGAP28Q9P2N2 729 aa15.04■□□□□ -0
CCDC40-209ENST00000573474 LRRIQ4A6NIV6 560 aa15.03■□□□□ -0
CCDC40-209ENST00000573474 NR3C1P04150 777 aa15.03■□□□□ -0
CCDC40-209ENST00000573474 TPM3P06753 285 aa15.03■□□□□ -0
CCDC40-209ENST00000573474 CST5P28325 142 aaPredicted RBP15.03■□□□□ -0
CCDC40-209ENST00000573474 CDC25BP30305 580 aa15.03■□□□□ -0
CCDC40-209ENST00000573474 CLCN3P51790 818 aa15.03■□□□□ -0
CCDC40-209ENST00000573474 CHMP4BP1P59074 171 aa15.03■□□□□ -0
CCDC40-209ENST00000573474 CAPSQ13938 189 aa15.03■□□□□ -0
CCDC40-209ENST00000573474 TFDP1Q14186 410 aa15.03■□□□□ -0
CCDC40-209ENST00000573474 MYBPC2Q14324 1141 aa15.03■□□□□ -0
CCDC40-209ENST00000573474 KRT31Q15323 416 aa15.03■□□□□ -0
CCDC40-209ENST00000573474 MARCH8Q5T0T0 291 aa15.03■□□□□ -0
CCDC40-209ENST00000573474 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.03■□□□□ -0
CCDC40-209ENST00000573474 MAP4K3Q8IVH8 894 aa15.03■□□□□ -0
CCDC40-209ENST00000573474 CNOT6LQ96LI5 555 aaKnown RBP15.03■□□□□ -0
CCDC40-209ENST00000573474 XPO4Q9C0E2 1151 aaKnown RBP15.03■□□□□ -0
CCDC40-209ENST00000573474 TMEM134Q9H6X4 195 aa15.03■□□□□ -0
CCDC40-209ENST00000573474 SETD4Q9NVD3 440 aa15.03■□□□□ -0
CCDC40-209ENST00000573474 PTPN22Q9Y2R2 807 aa15.03■□□□□ -0
CCDC40-209ENST00000573474 PHLPP2Q6ZVD8 1323 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms