RNA–Protein interactions for RNA: ENST00000571714.5

NPLOC4-206, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 676 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-206ENST00000571714 UBALD2Q8IYN6 164 aa12.57□□□□□ -0.4
NPLOC4-206ENST00000571714 SLC5A5Q92911 643 aa12.57□□□□□ -0.4
NPLOC4-206ENST00000571714 PHKBQ93100 1093 aa12.57□□□□□ -0.4
NPLOC4-206ENST00000571714 VN1R3Q9BXE9 311 aa12.57□□□□□ -0.4
NPLOC4-206ENST00000571714 MRPL9Q9BYD2 267 aaKnown RBP12.57□□□□□ -0.4
NPLOC4-206ENST00000571714 UNC45AQ9H3U1 944 aa12.57□□□□□ -0.4
NPLOC4-206ENST00000571714 TCEAL9Q9UHQ7 104 aa12.57□□□□□ -0.4
NPLOC4-206ENST00000571714 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.56□□□□□ -0.4
NPLOC4-206ENST00000571714 PROB1E7EW31 1015 aa12.56□□□□□ -0.4
NPLOC4-206ENST00000571714 CHMP2AO43633 222 aa12.56□□□□□ -0.4
NPLOC4-206ENST00000571714 B4GALT3O60512 393 aa12.56□□□□□ -0.4
NPLOC4-206ENST00000571714 EPCAMP16422 314 aa12.56□□□□□ -0.4
NPLOC4-206ENST00000571714 PHKA2P46019 1235 aa12.56□□□□□ -0.4
NPLOC4-206ENST00000571714 NUBP1P53384 320 aa12.56□□□□□ -0.4
NPLOC4-206ENST00000571714 RARS2Q5T160 578 aaKnown RBP12.56□□□□□ -0.4
NPLOC4-206ENST00000571714 KIAA1841Q6NSI8 718 aa12.56□□□□□ -0.4
NPLOC4-206ENST00000571714 CES5AQ6NT32 575 aa12.56□□□□□ -0.4
NPLOC4-206ENST00000571714 ASCL5Q7RTU5 278 aa12.56□□□□□ -0.4
NPLOC4-206ENST00000571714 VPS52Q8N1B4 723 aa12.56□□□□□ -0.4
NPLOC4-206ENST00000571714 ZNF710Q8N1W2 664 aa12.56□□□□□ -0.4
NPLOC4-206ENST00000571714 CCDC12Q8WUD4 166 aaPredicted RBP12.56□□□□□ -0.4
NPLOC4-206ENST00000571714 NLRP7Q8WX94 980 aa12.56□□□□□ -0.4
NPLOC4-206ENST00000571714 LPPQ93052 612 aa12.56□□□□□ -0.4
NPLOC4-206ENST00000571714 TMEM169Q96HH4 297 aa12.56□□□□□ -0.4
NPLOC4-206ENST00000571714 RIT2Q99578 217 aa12.56□□□□□ -0.4
NPLOC4-206ENST00000571714 SH2D3AQ9BRG2 576 aa12.56□□□□□ -0.4
NPLOC4-206ENST00000571714 TRAIPQ9BWF2 469 aa12.56□□□□□ -0.4
NPLOC4-206ENST00000571714 NAP1L2Q9ULW6 460 aaPredicted RBP12.56□□□□□ -0.4
NPLOC4-206ENST00000571714 IRAK3Q9Y616 596 aa12.56□□□□□ -0.4
NPLOC4-206ENST00000571714 IGKV6-21A0A0C4DH24 114 aa12.55□□□□□ -0.4
NPLOC4-206ENST00000571714 ZC3H11AO75152 810 aaKnown RBP eCLIP12.55□□□□□ -0.4
NPLOC4-206ENST00000571714 CXCL14O95715 111 aa12.55□□□□□ -0.4
NPLOC4-206ENST00000571714 GNA11P29992 359 aa12.55□□□□□ -0.4
NPLOC4-206ENST00000571714 SFNP31947 248 aa12.55□□□□□ -0.4
NPLOC4-206ENST00000571714 CA8P35219 290 aa12.55□□□□□ -0.4
NPLOC4-206ENST00000571714 MTHFRP42898 656 aa12.55□□□□□ -0.4
NPLOC4-206ENST00000571714 TBC1D8BQ0IIM8 1120 aa12.55□□□□□ -0.4
NPLOC4-206ENST00000571714 KRT32Q14532 448 aa12.55□□□□□ -0.4
NPLOC4-206ENST00000571714 LONRF3Q496Y0 759 aa12.55□□□□□ -0.4
NPLOC4-206ENST00000571714 B3GNT9Q6UX72 402 aa12.55□□□□□ -0.4
NPLOC4-206ENST00000571714 Q6ZUG5 572 aa12.55□□□□□ -0.4
NPLOC4-206ENST00000571714 ZDHHC14Q8IZN3 488 aa12.55□□□□□ -0.4
NPLOC4-206ENST00000571714 SLC22A17Q8WUG5 538 aa12.55□□□□□ -0.4
NPLOC4-206ENST00000571714 KCNB2Q92953 911 aa12.55□□□□□ -0.4
NPLOC4-206ENST00000571714 BRF1Q92994 677 aa12.55□□□□□ -0.4
NPLOC4-206ENST00000571714 IGSF21Q96ID5 467 aa12.55□□□□□ -0.4
NPLOC4-206ENST00000571714 CCDC136Q96JN2 1154 aa12.55□□□□□ -0.4
NPLOC4-206ENST00000571714 SCLT1Q96NL6 688 aa12.55□□□□□ -0.4
NPLOC4-206ENST00000571714 NRDE2Q9H7Z3 1164 aa12.55□□□□□ -0.4
NPLOC4-206ENST00000571714 NRBP2Q9NSY0 501 aa12.55□□□□□ -0.4
NPLOC4-206ENST00000571714 TBC1D13Q9NVG8 400 aa12.55□□□□□ -0.4
NPLOC4-206ENST00000571714 DACT1Q9NYF0 836 aa12.55□□□□□ -0.4
NPLOC4-206ENST00000571714 VPS54Q9P1Q0 977 aa12.55□□□□□ -0.4
NPLOC4-206ENST00000571714 A0A087WZ62 844 aa12.54□□□□□ -0.4
NPLOC4-206ENST00000571714 CCDC196A0A1B0GTZ2 297 aa12.54□□□□□ -0.4
NPLOC4-206ENST00000571714 GAS7O60861 476 aa12.54□□□□□ -0.4
NPLOC4-206ENST00000571714 PSMD10O75832 226 aa12.54□□□□□ -0.4
NPLOC4-206ENST00000571714 HMGB1P09429 215 aaKnown RBP12.54□□□□□ -0.4
NPLOC4-206ENST00000571714 CTSAP10619 480 aa12.54□□□□□ -0.4
NPLOC4-206ENST00000571714 NBL1P41271 181 aa12.54□□□□□ -0.4
NPLOC4-206ENST00000571714 ALDH7A1P49419 539 aaKnown RBP12.54□□□□□ -0.4
NPLOC4-206ENST00000571714 JAK3P52333 1124 aa12.54□□□□□ -0.4
NPLOC4-206ENST00000571714 PTPN14Q15678 1187 aa12.54□□□□□ -0.4
NPLOC4-206ENST00000571714 MTERF2Q49AM1 385 aa12.54□□□□□ -0.4
NPLOC4-206ENST00000571714 LRCH2Q5VUJ6 765 aa12.54□□□□□ -0.4
NPLOC4-206ENST00000571714 CWF19L1Q69YN2 538 aaKnown RBP12.54□□□□□ -0.4
NPLOC4-206ENST00000571714 DDX53Q86TM3 631 aaKnown RBP12.54□□□□□ -0.4
NPLOC4-206ENST00000571714 TDRD5Q8NAT2 981 aaKnown RBP12.54□□□□□ -0.4
NPLOC4-206ENST00000571714 FDXACB1Q9BRP7 624 aaPredicted RBP12.54□□□□□ -0.4
NPLOC4-206ENST00000571714 TEKT3Q9BXF9 490 aa12.54□□□□□ -0.4
NPLOC4-206ENST00000571714 RNF26Q9BY78 433 aaPredicted RBP12.54□□□□□ -0.4
NPLOC4-206ENST00000571714 NIFKQ9BYG3 293 aaKnown RBP12.54□□□□□ -0.4
NPLOC4-206ENST00000571714 IRF2BPLQ9H1B7 796 aa12.54□□□□□ -0.4
NPLOC4-206ENST00000571714 CHST12Q9NRB3 414 aa12.54□□□□□ -0.4
NPLOC4-206ENST00000571714 DZANK1Q9NVP4 752 aa12.54□□□□□ -0.4
NPLOC4-206ENST00000571714 DNAJB4Q9UDY4 337 aa12.54□□□□□ -0.4
NPLOC4-206ENST00000571714 SEPT9Q9UHD8 586 aaPredicted RBP12.54□□□□□ -0.4
NPLOC4-206ENST00000571714 ZFHX2Q9C0A1 2572 aaPredicted RBP12.54□□□□□ -0.4
NPLOC4-206ENST00000571714 CACNA1HO95180 2353 aa12.54□□□□□ -0.4
NPLOC4-206ENST00000571714 PRR23AA6NEV1 266 aa12.53□□□□□ -0.4
NPLOC4-206ENST00000571714 OFD1O75665 1012 aa12.53□□□□□ -0.4
NPLOC4-206ENST00000571714 TDP2O95551 362 aa12.53□□□□□ -0.4
NPLOC4-206ENST00000571714 GALTP07902 379 aa12.53□□□□□ -0.4
NPLOC4-206ENST00000571714 SLC11A1P49279 550 aa12.53□□□□□ -0.4
NPLOC4-206ENST00000571714 USP11P51784 963 aa12.53□□□□□ -0.4
NPLOC4-206ENST00000571714 POLGP54098 1239 aaPredicted RBP12.53□□□□□ -0.4
NPLOC4-206ENST00000571714 ZNF280BQ86YH2 543 aa12.53□□□□□ -0.4
NPLOC4-206ENST00000571714 KSR1Q8IVT5 923 aa12.53□□□□□ -0.4
NPLOC4-206ENST00000571714 FBXL16Q8N461 479 aa12.53□□□□□ -0.4
NPLOC4-206ENST00000571714 CCDC148Q8NFR7 591 aa12.53□□□□□ -0.4
NPLOC4-206ENST00000571714 BICD2Q8TD16 824 aa12.53□□□□□ -0.4
NPLOC4-206ENST00000571714 AGXT2Q9BYV1 514 aa12.53□□□□□ -0.4
NPLOC4-206ENST00000571714 GCOM2Q9BZD3 368 aaPredicted RBP12.53□□□□□ -0.4
NPLOC4-206ENST00000571714 FAM105AQ9NUU6 356 aa12.53□□□□□ -0.4
NPLOC4-206ENST00000571714 LIMD1Q9UGP4 676 aa12.53□□□□□ -0.4
NPLOC4-206ENST00000571714 DBR1Q9UK59 544 aaKnown RBP12.53□□□□□ -0.4
NPLOC4-206ENST00000571714 PIN4Q9Y237 131 aaKnown RBP12.53□□□□□ -0.4
NPLOC4-206ENST00000571714 USTQ9Y2C2 406 aa12.53□□□□□ -0.4
NPLOC4-206ENST00000571714 MAFO75444 373 aaPredicted RBP12.52□□□□□ -0.41
NPLOC4-206ENST00000571714 IFNAR1P17181 557 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms