RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-209	ENST00000569243	NCOA5	Q9HCD5	579 aa	Known RBP	5.2	□□□□□ -1.58
UBR1-209	ENST00000569243	CYP17A1	P05093	508 aa		5.19	□□□□□ -1.58
UBR1-209	ENST00000569243	CTGF	P29279	349 aa		5.19	□□□□□ -1.58
UBR1-209	ENST00000569243	ROM1	Q03395	351 aa		5.19	□□□□□ -1.58
UBR1-209	ENST00000569243	GAGE13	Q4V321	117 aa		5.19	□□□□□ -1.58
UBR1-209	ENST00000569243	FNDC3B	Q53EP0	1204 aa	Known RBP	5.19	□□□□□ -1.58
UBR1-209	ENST00000569243	ABHD17C	Q6PCB6	329 aa		5.19	□□□□□ -1.58
UBR1-209	ENST00000569243	IGSF22	Q8N9C0	903 aa		5.19	□□□□□ -1.58
UBR1-209	ENST00000569243	OR14K1	Q8NGZ2	314 aa		5.19	□□□□□ -1.58
UBR1-209	ENST00000569243	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	5.19	□□□□□ -1.58
UBR1-209	ENST00000569243	AGO3	Q9H9G7	860 aa	Known RBP	5.19	□□□□□ -1.58
UBR1-209	ENST00000569243	SAE1	Q9UBE0	346 aa	Predicted RBP	5.19	□□□□□ -1.58
UBR1-209	ENST00000569243	FAM184B	Q9ULE4	1060 aa		5.19	□□□□□ -1.58
UBR1-209	ENST00000569243	ONECUT2	O95948	504 aa		5.18	□□□□□ -1.58
UBR1-209	ENST00000569243	PTGS2	P35354	604 aa		5.18	□□□□□ -1.58
UBR1-209	ENST00000569243	RIN1	Q13671	783 aa		5.18	□□□□□ -1.58
UBR1-209	ENST00000569243	SF3A1	Q15459	793 aa	Known RBP	5.18	□□□□□ -1.58
UBR1-209	ENST00000569243	FSTL4	Q6MZW2	842 aa		5.18	□□□□□ -1.58
UBR1-209	ENST00000569243	MICALCL	Q6ZW33	695 aa		5.18	□□□□□ -1.58
UBR1-209	ENST00000569243	HAS1	Q92839	578 aa		5.18	□□□□□ -1.58
UBR1-209	ENST00000569243	KCMF1	Q9P0J7	381 aa		5.18	□□□□□ -1.58
UBR1-209	ENST00000569243	PRL	P01236	227 aa		5.17	□□□□□ -1.58
UBR1-209	ENST00000569243	ASL	P04424	464 aa		5.17	□□□□□ -1.58
UBR1-209	ENST00000569243	STAT5B	P51692	787 aa		5.17	□□□□□ -1.58
UBR1-209	ENST00000569243	DGKD	Q16760	1214 aa		5.17	□□□□□ -1.58
UBR1-209	ENST00000569243	ZCCHC8	Q6NZY4	707 aa	Known RBP	5.17	□□□□□ -1.58
UBR1-209	ENST00000569243	FGD2	Q7Z6J4	655 aa		5.17	□□□□□ -1.58
UBR1-209	ENST00000569243	NKD2	Q969F2	451 aa	Predicted RBP	5.17	□□□□□ -1.58
UBR1-209	ENST00000569243	MIEF2	Q96C03	454 aa		5.17	□□□□□ -1.58
UBR1-209	ENST00000569243	MAML3	Q96JK9	1138 aa		5.17	□□□□□ -1.58
UBR1-209	ENST00000569243	BRIP1	Q9BX63	1249 aa		5.17	□□□□□ -1.58
UBR1-209	ENST00000569243	DENND2A	Q9ULE3	1009 aa		5.17	□□□□□ -1.58
UBR1-209	ENST00000569243		A0A1W2PRX2	142 aa		5.16	□□□□□ -1.58
UBR1-209	ENST00000569243	MAFG	O15525	162 aa		5.16	□□□□□ -1.58
UBR1-209	ENST00000569243	IGFALS	P35858	605 aa		5.16	□□□□□ -1.58
UBR1-209	ENST00000569243	BCAR1	P56945	870 aa		5.16	□□□□□ -1.58
UBR1-209	ENST00000569243	ZNF662	Q6ZS27	426 aa		5.16	□□□□□ -1.58
UBR1-209	ENST00000569243	BMP8A	Q7Z5Y6	402 aa		5.16	□□□□□ -1.58
UBR1-209	ENST00000569243	CHST14	Q8NCH0	376 aa		5.16	□□□□□ -1.58
UBR1-209	ENST00000569243	GCDH	Q92947	438 aa	Predicted RBP	5.16	□□□□□ -1.58
UBR1-209	ENST00000569243	C16orf92	Q96LL3	132 aa		5.16	□□□□□ -1.58
UBR1-209	ENST00000569243	HAPLN2	Q9GZV7	340 aa		5.16	□□□□□ -1.58
UBR1-209	ENST00000569243	PTCH2	Q9Y6C5	1203 aa		5.16	□□□□□ -1.58
UBR1-209	ENST00000569243	KIAA0355	O15063	1070 aa		5.15	□□□□□ -1.59
UBR1-209	ENST00000569243	SCNN1G	P51170	649 aa		5.15	□□□□□ -1.59
UBR1-209	ENST00000569243	KIF11	P52732	1056 aa		5.15	□□□□□ -1.59
UBR1-209	ENST00000569243	SLC6A3	Q01959	620 aa		5.15	□□□□□ -1.59
UBR1-209	ENST00000569243	ADCY1	Q08828	1119 aa		5.15	□□□□□ -1.59
UBR1-209	ENST00000569243	ADAM15	Q13444	863 aa		5.15	□□□□□ -1.59
UBR1-209	ENST00000569243	EPHA7	Q15375	998 aa		5.15	□□□□□ -1.59
UBR1-209	ENST00000569243	NFE2L2	Q16236	605 aa		5.15	□□□□□ -1.59
UBR1-209	ENST00000569243	TTC38	Q5R3I4	469 aa		5.15	□□□□□ -1.59
UBR1-209	ENST00000569243	OLFML1	Q6UWY5	402 aa		5.15	□□□□□ -1.59
UBR1-209	ENST00000569243	LILRB2	Q8N423	598 aa		5.15	□□□□□ -1.59
UBR1-209	ENST00000569243	OR5AN1	Q8NGI8	311 aa		5.15	□□□□□ -1.59
UBR1-209	ENST00000569243	SYNPO2L	Q9H987	977 aa		5.15	□□□□□ -1.59
UBR1-209	ENST00000569243	CABP5	Q9NP86	173 aa		5.15	□□□□□ -1.59
UBR1-209	ENST00000569243	SH3BP1	Q9Y3L3	701 aa		5.15	□□□□□ -1.59
UBR1-209	ENST00000569243	UBA6	A0AVT1	1052 aa	Predicted RBP	5.14	□□□□□ -1.59
UBR1-209	ENST00000569243	C2orf78	A6NCI8	922 aa		5.14	□□□□□ -1.59
UBR1-209	ENST00000569243	ADAM8	P78325	824 aa		5.14	□□□□□ -1.59
UBR1-209	ENST00000569243	ATP2C1	P98194	919 aa	Predicted RBP	5.14	□□□□□ -1.59
UBR1-209	ENST00000569243	CNGB1	Q14028	1251 aa	Predicted RBP	5.14	□□□□□ -1.59
UBR1-209	ENST00000569243	SAFB2	Q14151	953 aa	Known RBP eCLIP	5.14	□□□□□ -1.59
UBR1-209	ENST00000569243	SLFN12L	Q6IEE8	588 aa		5.14	□□□□□ -1.59
UBR1-209	ENST00000569243	MFSD5	Q6N075	450 aa		5.14	□□□□□ -1.59
UBR1-209	ENST00000569243		Q6ZRM9	215 aa		5.14	□□□□□ -1.59
UBR1-209	ENST00000569243	CLEC14A	Q86T13	490 aa		5.14	□□□□□ -1.59
UBR1-209	ENST00000569243	ERCC4	Q92889	916 aa	Predicted RBP	5.14	□□□□□ -1.59
UBR1-209	ENST00000569243	ORAI3	Q9BRQ5	295 aa		5.14	□□□□□ -1.59
UBR1-209	ENST00000569243	MLST8	Q9BVC4	326 aa		5.14	□□□□□ -1.59
UBR1-209	ENST00000569243	SAMD15	Q9P1V8	674 aa		5.14	□□□□□ -1.59
UBR1-209	ENST00000569243	SYNPO2	Q9UMS6	1093 aa		5.14	□□□□□ -1.59
UBR1-209	ENST00000569243		H7C1D1	291 aa		5.13	□□□□□ -1.59
UBR1-209	ENST00000569243		M0R2C6	588 aa		5.13	□□□□□ -1.59
UBR1-209	ENST00000569243	FAM20B	O75063	409 aa		5.13	□□□□□ -1.59
UBR1-209	ENST00000569243	RFPL3	O75679	317 aa		5.13	□□□□□ -1.59
UBR1-209	ENST00000569243	JUN	P05412	331 aa	Known RBP	5.13	□□□□□ -1.59
UBR1-209	ENST00000569243	FLT3	P36888	993 aa		5.13	□□□□□ -1.59
UBR1-209	ENST00000569243	RGS3	P49796	1198 aa		5.13	□□□□□ -1.59
UBR1-209	ENST00000569243	TCIRG1	Q13488	830 aa		5.13	□□□□□ -1.59
UBR1-209	ENST00000569243	TOB2	Q14106	344 aa	Predicted RBP	5.13	□□□□□ -1.59
UBR1-209	ENST00000569243	ZNF174	Q15697	407 aa		5.13	□□□□□ -1.59
UBR1-209	ENST00000569243	FAM111B	Q6SJ93	734 aa		5.13	□□□□□ -1.59
UBR1-209	ENST00000569243	HTR3D	Q70Z44	454 aa		5.13	□□□□□ -1.59
UBR1-209	ENST00000569243	RD3	Q7Z3Z2	195 aa		5.13	□□□□□ -1.59
UBR1-209	ENST00000569243	GSPT2	Q8IYD1	628 aa	Known RBP	5.13	□□□□□ -1.59
UBR1-209	ENST00000569243	SYNPO	Q8N3V7	929 aa		5.13	□□□□□ -1.59
UBR1-209	ENST00000569243	RPGR	Q92834	1020 aa	Known RBP	5.13	□□□□□ -1.59
UBR1-209	ENST00000569243	WDR92	Q96MX6	357 aa		5.13	□□□□□ -1.59
UBR1-209	ENST00000569243	GPHA2	Q96T91	129 aa		5.13	□□□□□ -1.59
UBR1-209	ENST00000569243	OSBPL6	Q9BZF3	934 aa		5.13	□□□□□ -1.59
UBR1-209	ENST00000569243	PCIF1	Q9H4Z3	704 aa		5.13	□□□□□ -1.59
UBR1-209	ENST00000569243	B4GALT6	Q9UBX8	382 aa		5.13	□□□□□ -1.59
UBR1-209	ENST00000569243	PTPDC1	A2A3K4	754 aa		5.12	□□□□□ -1.59
UBR1-209	ENST00000569243	TRAF5	O00463	557 aa		5.12	□□□□□ -1.59
UBR1-209	ENST00000569243	DVL2	O14641	736 aa		5.12	□□□□□ -1.59
UBR1-209	ENST00000569243	DAPK3	O43293	454 aa		5.12	□□□□□ -1.59
UBR1-209	ENST00000569243	MTSS1	O43312	755 aa		5.12	□□□□□ -1.59
UBR1-209	ENST00000569243	GLRX3	O76003	335 aa	Known RBP	5.12	□□□□□ -1.59

Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms