RNA–Protein interactions for RNA: ENST00000569117.1

CDH3-210, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-210ENST00000569117 CHMP4BP1P59074 171 aa11.57□□□□□ -0.56
CDH3-210ENST00000569117 ASIC1P78348 528 aa11.57□□□□□ -0.56
CDH3-210ENST00000569117 MAPK7Q13164 816 aa11.57□□□□□ -0.56
CDH3-210ENST00000569117 PNOCQ13519 176 aa11.57□□□□□ -0.56
CDH3-210ENST00000569117 ITGA7Q13683 1181 aa11.57□□□□□ -0.56
CDH3-210ENST00000569117 GIT2Q14161 759 aa11.57□□□□□ -0.56
CDH3-210ENST00000569117 CAMK4Q16566 473 aa11.57□□□□□ -0.56
CDH3-210ENST00000569117 NT5DC1Q5TFE4 455 aa11.57□□□□□ -0.56
CDH3-210ENST00000569117 DYMQ7RTS9 669 aa11.57□□□□□ -0.56
CDH3-210ENST00000569117 DAW1Q8N136 415 aa11.57□□□□□ -0.56
CDH3-210ENST00000569117 LINC01465Q8N7H1 131 aa11.57□□□□□ -0.56
CDH3-210ENST00000569117 SLC43A3Q8NBI5 491 aa11.57□□□□□ -0.56
CDH3-210ENST00000569117 PBXIP1Q96AQ6 731 aa11.57□□□□□ -0.56
CDH3-210ENST00000569117 DRC1Q96MC2 740 aa11.57□□□□□ -0.56
CDH3-210ENST00000569117 BLZF1Q9H2G9 400 aa11.57□□□□□ -0.56
CDH3-210ENST00000569117 SETD4Q9NVD3 440 aa11.57□□□□□ -0.56
CDH3-210ENST00000569117 NPHP3-ACAD11A0A0J9YXS1 232 aa11.56□□□□□ -0.56
CDH3-210ENST00000569117 PVALEFA0A1B0GWK0 134 aa11.56□□□□□ -0.56
CDH3-210ENST00000569117 RSPH10B2B2RC85 870 aa11.56□□□□□ -0.56
CDH3-210ENST00000569117 KLRC4O43908 158 aa11.56□□□□□ -0.56
CDH3-210ENST00000569117 HIP1RO75146 1068 aa11.56□□□□□ -0.56
CDH3-210ENST00000569117 TBCAO75347 108 aaKnown RBP11.56□□□□□ -0.56
CDH3-210ENST00000569117 SMC2O95347 1197 aa11.56□□□□□ -0.56
CDH3-210ENST00000569117 RSPH10BP0C881 870 aa11.56□□□□□ -0.56
CDH3-210ENST00000569117 COL9A1P20849 921 aa11.56□□□□□ -0.56
CDH3-210ENST00000569117 DNAJB2P25686 324 aa11.56□□□□□ -0.56
CDH3-210ENST00000569117 KLRC1P26715 233 aa11.56□□□□□ -0.56
CDH3-210ENST00000569117 RTP1P59025 263 aa11.56□□□□□ -0.56
CDH3-210ENST00000569117 IGBP1P78318 339 aa11.56□□□□□ -0.56
CDH3-210ENST00000569117 EHHADHQ08426 723 aa11.56□□□□□ -0.56
CDH3-210ENST00000569117 PRPF38BQ5VTL8 546 aaKnown RBP11.56□□□□□ -0.56
CDH3-210ENST00000569117 GDF6Q6KF10 455 aaPredicted RBP11.56□□□□□ -0.56
CDH3-210ENST00000569117 MTHFD1LQ6UB35 978 aa11.56□□□□□ -0.56
CDH3-210ENST00000569117 NUDT18Q6ZVK8 323 aa11.56□□□□□ -0.56
CDH3-210ENST00000569117 UNC13DQ70J99 1090 aa11.56□□□□□ -0.56
CDH3-210ENST00000569117 PPP1R13LQ8WUF5 828 aa11.56□□□□□ -0.56
CDH3-210ENST00000569117 TCP11Q8WWU5 503 aa11.56□□□□□ -0.56
CDH3-210ENST00000569117 KIFAP3Q92845 792 aa11.56□□□□□ -0.56
CDH3-210ENST00000569117 KHSRPQ92945 711 aaKnown RBP eCLIP11.56□□□□□ -0.56
CDH3-210ENST00000569117 GSDMAQ96QA5 445 aa11.56□□□□□ -0.56
CDH3-210ENST00000569117 C17orf75Q9HAS0 396 aa11.56□□□□□ -0.56
CDH3-210ENST00000569117 SMIM35A0A1B0GVV1 85 aa11.55□□□□□ -0.56
CDH3-210ENST00000569117 FAM13AO94988 1023 aa11.55□□□□□ -0.56
CDH3-210ENST00000569117 RPN1P04843 607 aaKnown RBP11.55□□□□□ -0.56
CDH3-210ENST00000569117 GAP43P17677 238 aa11.55□□□□□ -0.56
CDH3-210ENST00000569117 SARSP49591 514 aaKnown RBP11.55□□□□□ -0.56
CDH3-210ENST00000569117 CLCN3P51790 818 aa11.55□□□□□ -0.56
CDH3-210ENST00000569117 RAD51AP2Q09MP3 1159 aa11.55□□□□□ -0.56
CDH3-210ENST00000569117 DRP2Q13474 957 aa11.55□□□□□ -0.56
CDH3-210ENST00000569117 KCNB1Q14721 858 aa11.55□□□□□ -0.56
CDH3-210ENST00000569117 SNX17Q15036 470 aa11.55□□□□□ -0.56
CDH3-210ENST00000569117 FAM47CQ5HY64 1035 aa11.55□□□□□ -0.56
CDH3-210ENST00000569117 C1orf53Q5VUE5 145 aa11.55□□□□□ -0.56
CDH3-210ENST00000569117 TAF2Q6P1X5 1199 aa11.55□□□□□ -0.56
CDH3-210ENST00000569117 SERINC5Q86VE9 423 aa11.55□□□□□ -0.56
CDH3-210ENST00000569117 CCDC65Q8IXS2 484 aa11.55□□□□□ -0.56
CDH3-210ENST00000569117 DIS3LQ8TF46 1054 aaKnown RBP11.55□□□□□ -0.56
CDH3-210ENST00000569117 PSPC1Q8WXF1 523 aaKnown RBP11.55□□□□□ -0.56
CDH3-210ENST00000569117 ERCC4Q92889 916 aaPredicted RBP11.55□□□□□ -0.56
CDH3-210ENST00000569117 SMARCE1Q969G3 411 aa11.55□□□□□ -0.56
CDH3-210ENST00000569117 ZBTB10Q96DT7 871 aa11.55□□□□□ -0.56
CDH3-210ENST00000569117 CTAGE1Q96RT6 745 aa11.55□□□□□ -0.56
CDH3-210ENST00000569117 POLR3FQ9H1D9 316 aaPredicted RBP11.55□□□□□ -0.56
CDH3-210ENST00000569117 PARVGQ9HBI0 331 aa11.55□□□□□ -0.56
CDH3-210ENST00000569117 GPRC5CQ9NQ84 441 aa11.55□□□□□ -0.56
CDH3-210ENST00000569117 OLFML3Q9NRN5 406 aa11.55□□□□□ -0.56
CDH3-210ENST00000569117 RMND1Q9NWS8 449 aa11.55□□□□□ -0.56
CDH3-210ENST00000569117 KIAA1468Q9P260 1216 aa11.55□□□□□ -0.56
CDH3-210ENST00000569117 SEL1LQ9UBV2 794 aa11.55□□□□□ -0.56
CDH3-210ENST00000569117 PCDHA5Q9Y5H7 936 aa11.55□□□□□ -0.56
CDH3-210ENST00000569117 PCDHA2Q9Y5H9 948 aa11.55□□□□□ -0.56
CDH3-210ENST00000569117 COL4A3BPQ9Y5P4 624 aa11.55□□□□□ -0.56
CDH3-210ENST00000569117 MROH7Q68CQ1 1323 aa11.55□□□□□ -0.56
CDH3-210ENST00000569117 ALPK3Q96L96 1907 aa11.54□□□□□ -0.56
CDH3-210ENST00000569117 ARVCFO00192 962 aa11.54□□□□□ -0.56
CDH3-210ENST00000569117 TREHO43280 583 aa11.54□□□□□ -0.56
CDH3-210ENST00000569117 RHOBTB3O94955 611 aa11.54□□□□□ -0.56
CDH3-210ENST00000569117 RPLP2P05387 115 aaKnown RBP11.54□□□□□ -0.56
CDH3-210ENST00000569117 CYP2C9P11712 490 aa11.54□□□□□ -0.56
CDH3-210ENST00000569117 PLS3P13797 630 aa11.54□□□□□ -0.56
CDH3-210ENST00000569117 IDEP14735 1019 aa11.54□□□□□ -0.56
CDH3-210ENST00000569117 RFX1P22670 979 aa11.54□□□□□ -0.56
CDH3-210ENST00000569117 TMOD1P28289 359 aa11.54□□□□□ -0.56
CDH3-210ENST00000569117 ARL2P36404 184 aa11.54□□□□□ -0.56
CDH3-210ENST00000569117 DNM2P50570 870 aa11.54□□□□□ -0.56
CDH3-210ENST00000569117 CDK7P50613 346 aa11.54□□□□□ -0.56
CDH3-210ENST00000569117 SOX10P56693 466 aa11.54□□□□□ -0.56
CDH3-210ENST00000569117 COASYQ13057 564 aa11.54□□□□□ -0.56
CDH3-210ENST00000569117 PPP2R5AQ15172 486 aa11.54□□□□□ -0.56
CDH3-210ENST00000569117 ARSIQ5FYB1 569 aa11.54□□□□□ -0.56
CDH3-210ENST00000569117 FAM102BQ5T8I3 360 aa11.54□□□□□ -0.56
CDH3-210ENST00000569117 IER5Q5VY09 327 aa11.54□□□□□ -0.56
CDH3-210ENST00000569117 EFCAB12Q6NXP0 572 aa11.54□□□□□ -0.56
CDH3-210ENST00000569117 MAEAQ7L5Y9 396 aa11.54□□□□□ -0.56
CDH3-210ENST00000569117 UBE2Q1Q7Z7E8 422 aa11.54□□□□□ -0.56
CDH3-210ENST00000569117 SFR1Q86XK3 245 aa11.54□□□□□ -0.56
CDH3-210ENST00000569117 LRRC71Q8N4P6 559 aa11.54□□□□□ -0.56
CDH3-210ENST00000569117 TRIML1Q8N9V2 468 aa11.54□□□□□ -0.56
CDH3-210ENST00000569117 CCDC47Q96A33 483 aaKnown RBP11.54□□□□□ -0.56
CDH3-210ENST00000569117 VTI1AQ96AJ9 217 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms