RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 MFAP3LO75121 409 aa4.98□□□□□ -1.61
CDH1-211ENST00000567320 CYP17A1P05093 508 aa4.98□□□□□ -1.61
CDH1-211ENST00000567320 SMAD3P84022 425 aaKnown RBP4.98□□□□□ -1.61
CDH1-211ENST00000567320 PIK3R6Q5UE93 754 aa4.98□□□□□ -1.61
CDH1-211ENST00000567320 TIGD7Q6NT04 549 aaPredicted RBP4.98□□□□□ -1.61
CDH1-211ENST00000567320 LDLRAD3Q86YD5 345 aa4.98□□□□□ -1.61
CDH1-211ENST00000567320 C8orf37Q96NL8 207 aa4.98□□□□□ -1.61
CDH1-211ENST00000567320 EPC1Q9H2F5 836 aa4.98□□□□□ -1.61
CDH1-211ENST00000567320 POLR3BQ9NW08 1133 aaPredicted RBP4.98□□□□□ -1.61
CDH1-211ENST00000567320 DVL2O14641 736 aa4.97□□□□□ -1.61
CDH1-211ENST00000567320 PLD2O14939 933 aa4.97□□□□□ -1.61
CDH1-211ENST00000567320 MAFGO15525 162 aa4.97□□□□□ -1.61
CDH1-211ENST00000567320 VSIG10L2P0DP72 767 aa4.97□□□□□ -1.61
CDH1-211ENST00000567320 HNRNPLP14866 589 aaKnown RBP eCLIP4.97□□□□□ -1.61
CDH1-211ENST00000567320 PTX3P26022 381 aaPredicted RBP4.97□□□□□ -1.61
CDH1-211ENST00000567320 FLT3P36888 993 aa4.97□□□□□ -1.61
CDH1-211ENST00000567320 NPEPPSP55786 919 aa4.97□□□□□ -1.61
CDH1-211ENST00000567320 BCAR1P56945 870 aa4.97□□□□□ -1.61
CDH1-211ENST00000567320 NANOS3P60323 173 aaKnown RBP4.97□□□□□ -1.61
CDH1-211ENST00000567320 GAGE13Q4V321 117 aa4.97□□□□□ -1.61
CDH1-211ENST00000567320 UBE2R2Q712K3 238 aaPredicted RBP4.97□□□□□ -1.61
CDH1-211ENST00000567320 NME9Q86XW9 330 aa4.97□□□□□ -1.61
CDH1-211ENST00000567320 C7orf31Q8N865 590 aa4.97□□□□□ -1.61
CDH1-211ENST00000567320 MKL1Q969V6 931 aa4.97□□□□□ -1.61
CDH1-211ENST00000567320 CRAMP1Q96RY5 1269 aa4.97□□□□□ -1.61
CDH1-211ENST00000567320 PRRX2Q99811 253 aa4.97□□□□□ -1.61
CDH1-211ENST00000567320 TNPO3Q9Y5L0 923 aaKnown RBP4.97□□□□□ -1.61
CDH1-211ENST00000567320 TMEM191CA6NGB0 347 aa4.96□□□□□ -1.62
CDH1-211ENST00000567320 IPO13O94829 963 aaKnown RBP4.96□□□□□ -1.62
CDH1-211ENST00000567320 PEX11BO96011 259 aa4.96□□□□□ -1.62
CDH1-211ENST00000567320 ASLP04424 464 aa4.96□□□□□ -1.62
CDH1-211ENST00000567320 JUNP05412 331 aaKnown RBP4.96□□□□□ -1.62
CDH1-211ENST00000567320 SLC9A1P19634 815 aa4.96□□□□□ -1.62
CDH1-211ENST00000567320 PTGS2P35354 604 aa4.96□□□□□ -1.62
CDH1-211ENST00000567320 MECP2P51608 486 aaKnown RBP4.96□□□□□ -1.62
CDH1-211ENST00000567320 SLC25A3Q00325 362 aa4.96□□□□□ -1.62
CDH1-211ENST00000567320 ADCY2Q08462 1091 aa4.96□□□□□ -1.62
CDH1-211ENST00000567320 LAIR1Q6GTX8 287 aa4.96□□□□□ -1.62
CDH1-211ENST00000567320 MFSD5Q6N075 450 aa4.96□□□□□ -1.62
CDH1-211ENST00000567320 BMP8AQ7Z5Y6 402 aa4.96□□□□□ -1.62
CDH1-211ENST00000567320 SYNE4Q8N205 404 aa4.96□□□□□ -1.62
CDH1-211ENST00000567320 LILRB2Q8N423 598 aa4.96□□□□□ -1.62
CDH1-211ENST00000567320 NKD2Q969F2 451 aaPredicted RBP4.96□□□□□ -1.62
CDH1-211ENST00000567320 CLUHP3Q96NS8 147 aa4.96□□□□□ -1.62
CDH1-211ENST00000567320 FAM193BQ96PV7 902 aaPredicted RBP4.96□□□□□ -1.62
CDH1-211ENST00000567320 TOMM22Q9NS69 142 aa4.96□□□□□ -1.62
CDH1-211ENST00000567320 DMRT1Q9Y5R6 373 aa4.96□□□□□ -1.62
CDH1-211ENST00000567320 GOLGA6L6A8MZA4 724 aa4.95□□□□□ -1.62
CDH1-211ENST00000567320 GNAT2P19087 354 aa4.95□□□□□ -1.62
CDH1-211ENST00000567320 ZNF460Q14592 562 aa4.95□□□□□ -1.62
CDH1-211ENST00000567320 CLEC14AQ86T13 490 aa4.95□□□□□ -1.62
CDH1-211ENST00000567320 JMYQ8N9B5 988 aa4.95□□□□□ -1.62
CDH1-211ENST00000567320 SLC25A43Q8WUT9 341 aaPredicted RBP4.95□□□□□ -1.62
CDH1-211ENST00000567320 HAS1Q92839 578 aa4.95□□□□□ -1.62
CDH1-211ENST00000567320 ZNF512Q96ME7 567 aaPredicted RBP4.95□□□□□ -1.62
CDH1-211ENST00000567320 UIMC1Q96RL1 719 aa4.95□□□□□ -1.62
CDH1-211ENST00000567320 DNAJC2Q99543 621 aaKnown RBP4.95□□□□□ -1.62
CDH1-211ENST00000567320 MNTQ99583 582 aa4.95□□□□□ -1.62
CDH1-211ENST00000567320 MTG2Q9H4K7 406 aa4.95□□□□□ -1.62
CDH1-211ENST00000567320 C14orf93Q9H972 538 aaKnown RBP4.95□□□□□ -1.62
CDH1-211ENST00000567320 XDHP47989 1333 aa4.95□□□□□ -1.62
CDH1-211ENST00000567320 TRAF5O00463 557 aa4.94□□□□□ -1.62
CDH1-211ENST00000567320 JMJD7P0C870 316 aa4.94□□□□□ -1.62
CDH1-211ENST00000567320 KIR2DL3P43628 341 aa4.94□□□□□ -1.62
CDH1-211ENST00000567320 ADCY1Q08828 1119 aa4.94□□□□□ -1.62
CDH1-211ENST00000567320 TOB2Q14106 344 aaPredicted RBP4.94□□□□□ -1.62
CDH1-211ENST00000567320 BMS1Q14692 1282 aaKnown RBP4.94□□□□□ -1.62
CDH1-211ENST00000567320 MYBPC3Q14896 1274 aa4.94□□□□□ -1.62
CDH1-211ENST00000567320 EPHA7Q15375 998 aa4.94□□□□□ -1.62
CDH1-211ENST00000567320 SF3A1Q15459 793 aaKnown RBP4.94□□□□□ -1.62
CDH1-211ENST00000567320 CFAP100Q494V2 611 aa4.94□□□□□ -1.62
CDH1-211ENST00000567320 FNDC3BQ53EP0 1204 aaKnown RBP4.94□□□□□ -1.62
CDH1-211ENST00000567320 RABL3Q5HYI8 236 aa4.94□□□□□ -1.62
CDH1-211ENST00000567320 PHYKPLQ8IUZ5 450 aa4.94□□□□□ -1.62
CDH1-211ENST00000567320 ULK2Q8IYT8 1036 aa4.94□□□□□ -1.62
CDH1-211ENST00000567320 CMTM4Q8IZR5 234 aa4.94□□□□□ -1.62
CDH1-211ENST00000567320 ZNF276Q8N554 614 aa4.94□□□□□ -1.62
CDH1-211ENST00000567320 C16orf92Q96LL3 132 aa4.94□□□□□ -1.62
CDH1-211ENST00000567320 AGAP2Q99490 1192 aa4.94□□□□□ -1.62
CDH1-211ENST00000567320 ELF4Q99607 663 aaPredicted RBP4.94□□□□□ -1.62
CDH1-211ENST00000567320 NOL10Q9BSC4 688 aaKnown RBP4.94□□□□□ -1.62
CDH1-211ENST00000567320 OSBPL2Q9H1P3 480 aa4.94□□□□□ -1.62
CDH1-211ENST00000567320 POFUT1Q9H488 388 aa4.94□□□□□ -1.62
CDH1-211ENST00000567320 ZKSCAN5Q9Y2L8 839 aa4.94□□□□□ -1.62
CDH1-211ENST00000567320 DNAJC8O75937 253 aaPredicted RBP4.93□□□□□ -1.62
CDH1-211ENST00000567320 HK1P19367 917 aa4.93□□□□□ -1.62
CDH1-211ENST00000567320 BMP5P22003 454 aa4.93□□□□□ -1.62
CDH1-211ENST00000567320 ADAM8P78325 824 aa4.93□□□□□ -1.62
CDH1-211ENST00000567320 MAN2A1Q16706 1144 aa4.93□□□□□ -1.62
CDH1-211ENST00000567320 ST8SIA2Q92186 375 aa4.93□□□□□ -1.62
CDH1-211ENST00000567320 RTF1Q92541 710 aaKnown RBP4.93□□□□□ -1.62
CDH1-211ENST00000567320 MYL10Q9BUA6 226 aa4.93□□□□□ -1.62
CDH1-211ENST00000567320 GPRC5BQ9NZH0 403 aa4.93□□□□□ -1.62
CDH1-211ENST00000567320 B4GALT6Q9UBX8 382 aa4.93□□□□□ -1.62
CDH1-211ENST00000567320 SORCS3Q9UPU3 1222 aa4.93□□□□□ -1.62
CDH1-211ENST00000567320 KLRG2A4D1S0 409 aaPredicted RBP4.92□□□□□ -1.62
CDH1-211ENST00000567320 FOXN1O15353 648 aa4.92□□□□□ -1.62
CDH1-211ENST00000567320 RECQL4O94761 1208 aa4.92□□□□□ -1.62
CDH1-211ENST00000567320 PRPF6O94906 941 aaKnown RBP4.92□□□□□ -1.62
CDH1-211ENST00000567320 FSBPO95073 299 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms