RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 UBOX5O94941 541 aa13.53□□□□□ -0.24
COMMD4-209ENST00000564068 MAN1A1P33908 653 aa13.53□□□□□ -0.24
COMMD4-209ENST00000564068 MFAP3P55082 362 aa13.53□□□□□ -0.24
COMMD4-209ENST00000564068 CDR2Q01850 454 aa13.53□□□□□ -0.24
COMMD4-209ENST00000564068 PPP2R5DQ14738 602 aa13.53□□□□□ -0.24
COMMD4-209ENST00000564068 BBS9Q3SYG4 887 aa13.53□□□□□ -0.24
COMMD4-209ENST00000564068 BARGINQ6ZT62 677 aa13.53□□□□□ -0.24
COMMD4-209ENST00000564068 SMIM5Q71RC9 77 aa13.53□□□□□ -0.24
COMMD4-209ENST00000564068 DEFB132Q7Z7B7 95 aa13.53□□□□□ -0.24
COMMD4-209ENST00000564068 SYT2Q8N9I0 419 aaPredicted RBP13.53□□□□□ -0.24
COMMD4-209ENST00000564068 CEP95Q96GE4 821 aa13.53□□□□□ -0.24
COMMD4-209ENST00000564068 DUSP9Q99956 384 aaKnown RBP13.53□□□□□ -0.24
COMMD4-209ENST00000564068 ALG13Q9NP73 1137 aaKnown RBP13.53□□□□□ -0.24
COMMD4-209ENST00000564068 DIS3Q9Y2L1 958 aaKnown RBP13.53□□□□□ -0.24
COMMD4-209ENST00000564068 ERVV-1B6SEH8 477 aa13.53□□□□□ -0.24
COMMD4-209ENST00000564068 MT-ND3P03897 115 aa13.53□□□□□ -0.24
COMMD4-209ENST00000564068 RNASELQ05823 741 aaKnown RBP13.53□□□□□ -0.24
COMMD4-209ENST00000564068 KYNUQ16719 465 aa13.53□□□□□ -0.24
COMMD4-209ENST00000564068 MAP7D1Q3KQU3 841 aa13.53□□□□□ -0.24
COMMD4-209ENST00000564068 MIER3Q7Z3K6 550 aa13.53□□□□□ -0.24
COMMD4-209ENST00000564068 TTC16Q8NEE8 873 aa13.53□□□□□ -0.24
COMMD4-209ENST00000564068 FBXO25Q8TCJ0 367 aa13.53□□□□□ -0.24
COMMD4-209ENST00000564068 TTC17Q96AE7 1141 aa13.53□□□□□ -0.24
COMMD4-209ENST00000564068 GOLGA8SH3BPF8 625 aa13.53□□□□□ -0.24
COMMD4-209ENST00000564068 GOLGA8MH3BSY2 632 aa13.53□□□□□ -0.24
COMMD4-209ENST00000564068 STXBP3O00186 592 aa13.53□□□□□ -0.24
COMMD4-209ENST00000564068 OPLAHO14841 1288 aa13.53□□□□□ -0.24
COMMD4-209ENST00000564068 FANCGO15287 622 aa13.53□□□□□ -0.24
COMMD4-209ENST00000564068 HOXA13P31271 388 aaPredicted RBP13.53□□□□□ -0.24
COMMD4-209ENST00000564068 PDE1CQ14123 709 aaPredicted RBP13.53□□□□□ -0.24
COMMD4-209ENST00000564068 DHX34Q14147 1143 aaKnown RBP13.53□□□□□ -0.24
COMMD4-209ENST00000564068 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.53□□□□□ -0.24
COMMD4-209ENST00000564068 GJB7Q6PEY0 223 aa13.53□□□□□ -0.24
COMMD4-209ENST00000564068 SH3RF1Q7Z6J0 888 aa13.53□□□□□ -0.24
COMMD4-209ENST00000564068 CALR3Q96L12 384 aaKnown RBP13.53□□□□□ -0.24
COMMD4-209ENST00000564068 SRP68Q9UHB9 627 aaKnown RBP13.53□□□□□ -0.24
COMMD4-209ENST00000564068 NAGPAQ9UK23 515 aa13.53□□□□□ -0.24
COMMD4-209ENST00000564068 ORC4O43929 436 aa13.52□□□□□ -0.24
COMMD4-209ENST00000564068 ATP5HO75947 161 aa13.52□□□□□ -0.24
COMMD4-209ENST00000564068 ATP6V1G2O95670 118 aa13.52□□□□□ -0.24
COMMD4-209ENST00000564068 TRADDQ15628 312 aa13.52□□□□□ -0.24
COMMD4-209ENST00000564068 NAALADL2Q58DX5 795 aa13.52□□□□□ -0.24
COMMD4-209ENST00000564068 FIGNQ5HY92 759 aa13.52□□□□□ -0.24
COMMD4-209ENST00000564068 GPATCH4Q5T3I0 446 aaKnown RBP13.52□□□□□ -0.24
COMMD4-209ENST00000564068 EPS8L3Q8TE67 593 aaKnown RBP13.52□□□□□ -0.24
COMMD4-209ENST00000564068 FERMT1Q9BQL6 677 aa13.52□□□□□ -0.24
COMMD4-209ENST00000564068 PPP1R12AO14974 1030 aaPredicted RBP13.52□□□□□ -0.25
COMMD4-209ENST00000564068 ZNF844Q08AG5 666 aa13.52□□□□□ -0.25
COMMD4-209ENST00000564068 MEA1Q16626 185 aa13.52□□□□□ -0.25
COMMD4-209ENST00000564068 MIEF2Q96C03 454 aa13.52□□□□□ -0.25
COMMD4-209ENST00000564068 DDX27Q96GQ7 796 aaKnown RBP13.52□□□□□ -0.25
COMMD4-209ENST00000564068 AMNQ9BXJ7 453 aa13.52□□□□□ -0.25
COMMD4-209ENST00000564068 DLGAP2Q9P1A6 1054 aa13.52□□□□□ -0.25
COMMD4-209ENST00000564068 CNOT8Q9UFF9 292 aaKnown RBP13.52□□□□□ -0.25
COMMD4-209ENST00000564068 FAM205AQ6ZU69 1335 aa13.52□□□□□ -0.25
COMMD4-209ENST00000564068 hCG_2014768A0A024R1R8 64 aa13.52□□□□□ -0.25
COMMD4-209ENST00000564068 TTLL1O95922 423 aa13.52□□□□□ -0.25
COMMD4-209ENST00000564068 NQO1P15559 274 aaKnown RBP13.52□□□□□ -0.25
COMMD4-209ENST00000564068 IRX4P78413 519 aa13.52□□□□□ -0.25
COMMD4-209ENST00000564068 KLC1Q07866 573 aa13.52□□□□□ -0.25
COMMD4-209ENST00000564068 VPS72Q15906 364 aa13.52□□□□□ -0.25
COMMD4-209ENST00000564068 TMEM154Q6P9G4 183 aa13.52□□□□□ -0.25
COMMD4-209ENST00000564068 ANO3Q9BYT9 981 aa13.52□□□□□ -0.25
COMMD4-209ENST00000564068 PABPC3Q9H361 631 aaKnown RBP13.52□□□□□ -0.25
COMMD4-209ENST00000564068 MINPP1Q9UNW1 487 aa13.52□□□□□ -0.25
COMMD4-209ENST00000564068 SMIM22K7EJ46 135 aa13.51□□□□□ -0.25
COMMD4-209ENST00000564068 GAP43P17677 238 aa13.51□□□□□ -0.25
COMMD4-209ENST00000564068 CASP7P55210 303 aa13.51□□□□□ -0.25
COMMD4-209ENST00000564068 SLC8A3P57103 927 aa13.51□□□□□ -0.25
COMMD4-209ENST00000564068 CDK17Q00537 523 aa13.51□□□□□ -0.25
COMMD4-209ENST00000564068 CELF1Q92879 486 aaKnown RBP13.51□□□□□ -0.25
COMMD4-209ENST00000564068 PNMA6FA0A0J9YX94 578 aa13.51□□□□□ -0.25
COMMD4-209ENST00000564068 KIF3CO14782 793 aa13.51□□□□□ -0.25
COMMD4-209ENST00000564068 OGFOD1Q8N543 542 aa13.51□□□□□ -0.25
COMMD4-209ENST00000564068 FAM84BQ96KN1 310 aaPredicted RBP13.51□□□□□ -0.25
COMMD4-209ENST00000564068 TRIM55Q9BYV6 548 aa13.51□□□□□ -0.25
COMMD4-209ENST00000564068 PPARGC1AQ9UBK2 798 aaKnown RBP13.51□□□□□ -0.25
COMMD4-209ENST00000564068 MAD1L1Q9Y6D9 718 aa13.51□□□□□ -0.25
COMMD4-209ENST00000564068 ZBTB7AO95365 584 aa13.51□□□□□ -0.25
COMMD4-209ENST00000564068 SOX5P35711 763 aa13.51□□□□□ -0.25
COMMD4-209ENST00000564068 PBX1P40424 430 aa13.51□□□□□ -0.25
COMMD4-209ENST00000564068 COPS2P61201 443 aa13.51□□□□□ -0.25
COMMD4-209ENST00000564068 RASA3Q14644 834 aa13.51□□□□□ -0.25
COMMD4-209ENST00000564068 WDR78Q5VTH9 848 aa13.51□□□□□ -0.25
COMMD4-209ENST00000564068 TPCN2Q8NHX9 752 aa13.51□□□□□ -0.25
COMMD4-209ENST00000564068 POMGNT1Q8WZA1 660 aa13.51□□□□□ -0.25
COMMD4-209ENST00000564068 AGPSO00116 658 aa13.5□□□□□ -0.25
COMMD4-209ENST00000564068 EPHB6O15197 1021 aa13.5□□□□□ -0.25
COMMD4-209ENST00000564068 HAUS5O94927 633 aa13.5□□□□□ -0.25
COMMD4-209ENST00000564068 CYP19A1P11511 503 aaPredicted RBP13.5□□□□□ -0.25
COMMD4-209ENST00000564068 KRT17Q04695 432 aa13.5□□□□□ -0.25
COMMD4-209ENST00000564068 SEC23AQ15436 765 aa13.5□□□□□ -0.25
COMMD4-209ENST00000564068 XKR9Q5GH70 373 aa13.5□□□□□ -0.25
COMMD4-209ENST00000564068 SH2D4BQ5SQS7 431 aa13.5□□□□□ -0.25
COMMD4-209ENST00000564068 CENPPQ6IPU0 288 aa13.5□□□□□ -0.25
COMMD4-209ENST00000564068 SLC17A8Q8NDX2 589 aa13.5□□□□□ -0.25
COMMD4-209ENST00000564068 ZNF564Q8TBZ8 553 aaPredicted RBP13.5□□□□□ -0.25
COMMD4-209ENST00000564068 PYROXD1Q8WU10 500 aa13.5□□□□□ -0.25
COMMD4-209ENST00000564068 FGD4Q96M96 766 aa13.5□□□□□ -0.25
COMMD4-209ENST00000564068 TRPA1O75762 1119 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms