RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 M0R3G1 203 aa6.67□□□□□ -1.34
CLK3-212ENST00000563418 CRCPO75575 148 aa6.67□□□□□ -1.34
CLK3-212ENST00000563418 C15orf59Q2T9L4 293 aaPredicted RBP6.67□□□□□ -1.34
CLK3-212ENST00000563418 PI4KAP1Q8N8J0 262 aa6.67□□□□□ -1.34
CLK3-212ENST00000563418 SEPT1Q8WYJ6 367 aa6.67□□□□□ -1.34
CLK3-212ENST00000563418 RMDN1Q96DB5 314 aa6.67□□□□□ -1.34
CLK3-212ENST00000563418 CCDC85AQ96PX6 553 aaPredicted RBP6.67□□□□□ -1.34
CLK3-212ENST00000563418 PRPF18Q99633 342 aaKnown RBP6.67□□□□□ -1.34
CLK3-212ENST00000563418 PHACTR1Q9C0D0 580 aa6.67□□□□□ -1.34
CLK3-212ENST00000563418 FADS3Q9Y5Q0 445 aa6.67□□□□□ -1.34
CLK3-212ENST00000563418 EXOC3O60645 756 aa6.66□□□□□ -1.34
CLK3-212ENST00000563418 STAM2O75886 525 aa6.66□□□□□ -1.34
CLK3-212ENST00000563418 FAM13AO94988 1023 aa6.66□□□□□ -1.34
CLK3-212ENST00000563418 GEN1Q17RS7 908 aa6.66□□□□□ -1.34
CLK3-212ENST00000563418 SETD3Q86TU7 594 aaPredicted RBP6.66□□□□□ -1.34
CLK3-212ENST00000563418 LRRC39Q96DD0 335 aa6.66□□□□□ -1.34
CLK3-212ENST00000563418 RAB20Q9NX57 234 aa6.66□□□□□ -1.34
CLK3-212ENST00000563418 TMEM120BA0PK00 339 aa6.66□□□□□ -1.34
CLK3-212ENST00000563418 HSPA1AP0DMV8 641 aaKnown RBP6.66□□□□□ -1.34
CLK3-212ENST00000563418 HSPA1BP0DMV9 641 aaKnown RBP6.66□□□□□ -1.34
CLK3-212ENST00000563418 CPSF1Q10570 1443 aaKnown RBP6.66□□□□□ -1.34
CLK3-212ENST00000563418 LPIN1Q14693 890 aa6.66□□□□□ -1.34
CLK3-212ENST00000563418 MAPRE2Q15555 327 aa6.66□□□□□ -1.34
CLK3-212ENST00000563418 ZNF174Q15697 407 aa6.66□□□□□ -1.34
CLK3-212ENST00000563418 TMEM132EQ6IEE7 984 aa6.66□□□□□ -1.34
CLK3-212ENST00000563418 PPP4R3CPQ6ZMV5 832 aa6.66□□□□□ -1.34
CLK3-212ENST00000563418 ACAD11Q709F0 780 aa6.66□□□□□ -1.34
CLK3-212ENST00000563418 KAT2BQ92831 832 aa6.66□□□□□ -1.34
CLK3-212ENST00000563418 MRRFQ96E11 262 aaKnown RBP6.66□□□□□ -1.34
CLK3-212ENST00000563418 FAM227BQ96M60 508 aa6.66□□□□□ -1.34
CLK3-212ENST00000563418 NLRC4Q9NPP4 1024 aa6.66□□□□□ -1.34
CLK3-212ENST00000563418 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.66□□□□□ -1.34
CLK3-212ENST00000563418 TLK1Q9UKI8 766 aa6.66□□□□□ -1.34
CLK3-212ENST00000563418 PNMA2Q9UL42 364 aa6.66□□□□□ -1.34
CLK3-212ENST00000563418 MINDY4BA8MYZ0 360 aa6.66□□□□□ -1.34
CLK3-212ENST00000563418 DLGAP3O95886 979 aa6.66□□□□□ -1.34
CLK3-212ENST00000563418 SNX16P57768 344 aa6.66□□□□□ -1.34
CLK3-212ENST00000563418 TMCO4Q5TGY1 634 aa6.66□□□□□ -1.34
CLK3-212ENST00000563418 ARMC3Q5W041 872 aa6.66□□□□□ -1.34
CLK3-212ENST00000563418 LRRC34Q8IZ02 419 aa6.66□□□□□ -1.34
CLK3-212ENST00000563418 PABPC3Q9H361 631 aaKnown RBP6.66□□□□□ -1.34
CLK3-212ENST00000563418 TBK1Q9UHD2 729 aa6.66□□□□□ -1.34
CLK3-212ENST00000563418 PTPN22Q9Y2R2 807 aa6.66□□□□□ -1.34
CLK3-212ENST00000563418 ZBBXA8MT70 800 aa6.66□□□□□ -1.34
CLK3-212ENST00000563418 SLC9C2Q5TAH2 1124 aa6.66□□□□□ -1.34
CLK3-212ENST00000563418 C11orf74Q86VG3 221 aa6.66□□□□□ -1.34
CLK3-212ENST00000563418 CES2O00748 559 aa6.66□□□□□ -1.34
CLK3-212ENST00000563418 KRT16P08779 473 aa6.66□□□□□ -1.34
CLK3-212ENST00000563418 KPNA2P52292 529 aaKnown RBP6.66□□□□□ -1.34
CLK3-212ENST00000563418 CYTH1Q15438 398 aa6.66□□□□□ -1.34
CLK3-212ENST00000563418 KSR2Q6VAB6 950 aa6.66□□□□□ -1.34
CLK3-212ENST00000563418 GET4Q7L5D6 327 aaPredicted RBP6.66□□□□□ -1.34
CLK3-212ENST00000563418 PROM2Q8N271 834 aa6.66□□□□□ -1.34
CLK3-212ENST00000563418 LINS1Q8NG48 757 aa6.66□□□□□ -1.34
CLK3-212ENST00000563418 ARL8AQ96BM9 186 aa6.66□□□□□ -1.34
CLK3-212ENST00000563418 MAPK8IP1Q9UQF2 711 aa6.66□□□□□ -1.34
CLK3-212ENST00000563418 TMEM191CA6NGB0 347 aa6.66□□□□□ -1.34
CLK3-212ENST00000563418 UNC5CO95185 931 aa6.66□□□□□ -1.34
CLK3-212ENST00000563418 TMEM191BP0C7N4 346 aa6.66□□□□□ -1.34
CLK3-212ENST00000563418 PTH1RQ03431 593 aa6.66□□□□□ -1.34
CLK3-212ENST00000563418 ZFP1Q6P2D0 407 aa6.66□□□□□ -1.34
CLK3-212ENST00000563418 PRR23BQ6ZRT6 265 aa6.66□□□□□ -1.34
CLK3-212ENST00000563418 DACT3Q96B18 629 aaPredicted RBP6.66□□□□□ -1.34
CLK3-212ENST00000563418 HINFPQ9BQA5 517 aa6.66□□□□□ -1.34
CLK3-212ENST00000563418 THRAP3Q9Y2W1 955 aaKnown RBP6.66□□□□□ -1.34
CLK3-212ENST00000563418 SSU72P8A0A1W2PR75 194 aa6.66□□□□□ -1.34
CLK3-212ENST00000563418 STX7O15400 261 aaKnown RBP6.66□□□□□ -1.34
CLK3-212ENST00000563418 SP100P23497 879 aaPredicted RBP6.66□□□□□ -1.34
CLK3-212ENST00000563418 IFIT5Q13325 482 aaKnown RBP6.66□□□□□ -1.34
CLK3-212ENST00000563418 LETM2Q2VYF4 491 aa6.66□□□□□ -1.34
CLK3-212ENST00000563418 P3H1Q32P28 736 aa6.66□□□□□ -1.34
CLK3-212ENST00000563418 PACS1Q6VY07 963 aa6.66□□□□□ -1.34
CLK3-212ENST00000563418 HDDC2Q7Z4H3 204 aa6.66□□□□□ -1.34
CLK3-212ENST00000563418 SCUBE1Q8IWY4 988 aa6.66□□□□□ -1.34
CLK3-212ENST00000563418 PTPRN2Q92932 1015 aa6.66□□□□□ -1.34
CLK3-212ENST00000563418 SMYD3Q9H7B4 428 aa6.66□□□□□ -1.34
CLK3-212ENST00000563418 DAPK2Q9UIK4 370 aa6.66□□□□□ -1.34
CLK3-212ENST00000563418 CNOT7Q9UIV1 285 aaKnown RBP6.66□□□□□ -1.34
CLK3-212ENST00000563418 BAG5Q9UL15 447 aa6.66□□□□□ -1.34
CLK3-212ENST00000563418 PRG4Q92954 1404 aaPredicted RBP6.66□□□□□ -1.34
CLK3-212ENST00000563418 PLB1Q6P1J6 1458 aa6.66□□□□□ -1.34
CLK3-212ENST00000563418 POTECB2RU33 542 aa6.66□□□□□ -1.34
CLK3-212ENST00000563418 TARSP26639 723 aaKnown RBP6.66□□□□□ -1.34
CLK3-212ENST00000563418 CD151P48509 253 aa6.66□□□□□ -1.34
CLK3-212ENST00000563418 TMPRSS15P98073 1019 aa6.66□□□□□ -1.34
CLK3-212ENST00000563418 ITGA7Q13683 1181 aa6.66□□□□□ -1.34
CLK3-212ENST00000563418 S100ZQ8WXG8 99 aa6.66□□□□□ -1.34
CLK3-212ENST00000563418 FBXO28Q9NVF7 368 aa6.66□□□□□ -1.34
CLK3-212ENST00000563418 SEL1LQ9UBV2 794 aa6.66□□□□□ -1.34
CLK3-212ENST00000563418 PFASO15067 1338 aa6.66□□□□□ -1.34
CLK3-212ENST00000563418 PDE6AP16499 860 aa6.65□□□□□ -1.34
CLK3-212ENST00000563418 CARSP49589 748 aaKnown RBP6.65□□□□□ -1.34
CLK3-212ENST00000563418 POLR2FP61218 127 aaKnown RBP6.65□□□□□ -1.34
CLK3-212ENST00000563418 ZNF530Q6P9A1 599 aaPredicted RBP6.65□□□□□ -1.34
CLK3-212ENST00000563418 ACSBG1Q96GR2 724 aa6.65□□□□□ -1.34
CLK3-212ENST00000563418 TIPINQ9BVW5 301 aa6.65□□□□□ -1.34
CLK3-212ENST00000563418 RHOBTB2Q9BYZ6 727 aa6.65□□□□□ -1.34
CLK3-212ENST00000563418 RABL2BQ9UNT1 228 aa6.65□□□□□ -1.34
CLK3-212ENST00000563418 FANCAO15360 1455 aa6.65□□□□□ -1.34
CLK3-212ENST00000563418 MED23Q9ULK4 1368 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms