RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 RAB3GAP1Q15042 981 aa4.9□□□□□ -1.63
HERC1-211ENST00000560983 AXDND1Q5T1B0 1012 aaPredicted RBP4.9□□□□□ -1.63
HERC1-211ENST00000560983 MAP3K21Q5TCX8 1036 aa4.9□□□□□ -1.63
HERC1-211ENST00000560983 CNKSR3Q6P9H4 555 aa4.9□□□□□ -1.63
HERC1-211ENST00000560983 TMC6Q7Z403 805 aa4.9□□□□□ -1.63
HERC1-211ENST00000560983 TMEM87AQ8NBN3 555 aa4.9□□□□□ -1.63
HERC1-211ENST00000560983 TP53I13Q8NBR0 393 aaPredicted RBP4.9□□□□□ -1.63
HERC1-211ENST00000560983 RTF1Q92541 710 aaKnown RBP4.9□□□□□ -1.63
HERC1-211ENST00000560983 TMEM39BQ9GZU3 492 aa4.9□□□□□ -1.63
HERC1-211ENST00000560983 GP6Q9HCN6 339 aa4.9□□□□□ -1.63
HERC1-211ENST00000560983 LUC7LQ9NQ29 371 aaKnown RBP4.9□□□□□ -1.63
HERC1-211ENST00000560983 FHOD1Q9Y613 1164 aa4.9□□□□□ -1.63
HERC1-211ENST00000560983 SIPA1L3O60292 1781 aaPredicted RBP4.9□□□□□ -1.63
HERC1-211ENST00000560983 DNAH14Q0VDD8 3507 aa4.9□□□□□ -1.63
HERC1-211ENST00000560983 REV3LO60673 3130 aa4.9□□□□□ -1.63
HERC1-211ENST00000560983 MED23Q9ULK4 1368 aa4.9□□□□□ -1.63
HERC1-211ENST00000560983 OTOL1A6NHN0 477 aaPredicted RBP4.89□□□□□ -1.63
HERC1-211ENST00000560983 F8W031 263 aaPredicted RBP4.89□□□□□ -1.63
HERC1-211ENST00000560983 TNPO2O14787 897 aaKnown RBP4.89□□□□□ -1.63
HERC1-211ENST00000560983 U2SURPO15042 1029 aaKnown RBP4.89□□□□□ -1.63
HERC1-211ENST00000560983 MYO1BO43795 1136 aa4.89□□□□□ -1.63
HERC1-211ENST00000560983 HMGCRP04035 888 aa4.89□□□□□ -1.63
HERC1-211ENST00000560983 PRKAR2BP31323 418 aa4.89□□□□□ -1.63
HERC1-211ENST00000560983 ZNF76P36508 570 aa4.89□□□□□ -1.63
HERC1-211ENST00000560983 EPHB4P54760 987 aa4.89□□□□□ -1.63
HERC1-211ENST00000560983 CORO7P57737 925 aa4.89□□□□□ -1.63
HERC1-211ENST00000560983 KRTAP10-2P60368 255 aa4.89□□□□□ -1.63
HERC1-211ENST00000560983 AIMP1Q12904 312 aaKnown RBP4.89□□□□□ -1.63
HERC1-211ENST00000560983 ZYXQ15942 572 aaKnown RBP4.89□□□□□ -1.63
HERC1-211ENST00000560983 HLA-DQA1Q5Y7H0 255 aa4.89□□□□□ -1.63
HERC1-211ENST00000560983 DCAF15Q66K64 600 aa4.89□□□□□ -1.63
HERC1-211ENST00000560983 CYP2R1Q6VVX0 501 aa4.89□□□□□ -1.63
HERC1-211ENST00000560983 CCDC144CPQ8IYA2 1237 aa4.89□□□□□ -1.63
HERC1-211ENST00000560983 LINC01356Q8N9X3 169 aa4.89□□□□□ -1.63
HERC1-211ENST00000560983 BADQ92934 168 aa4.89□□□□□ -1.63
HERC1-211ENST00000560983 PARK7Q99497 189 aaKnown RBP4.89□□□□□ -1.63
HERC1-211ENST00000560983 ZNF70Q9UC06 446 aaPredicted RBP4.89□□□□□ -1.63
HERC1-211ENST00000560983 NUDT19A8MXV4 375 aa4.88□□□□□ -1.63
HERC1-211ENST00000560983 CBFA2T2O43439 604 aa4.88□□□□□ -1.63
HERC1-211ENST00000560983 KRT37O76014 449 aa4.88□□□□□ -1.63
HERC1-211ENST00000560983 DBHP09172 617 aa4.88□□□□□ -1.63
HERC1-211ENST00000560983 EIF2S2P20042 333 aaKnown RBP4.88□□□□□ -1.63
HERC1-211ENST00000560983 CD247P20963 164 aa4.88□□□□□ -1.63
HERC1-211ENST00000560983 GUCY2CP25092 1073 aa4.88□□□□□ -1.63
HERC1-211ENST00000560983 ITGB8P26012 769 aa4.88□□□□□ -1.63
HERC1-211ENST00000560983 CCT4P50991 539 aaKnown RBP4.88□□□□□ -1.63
HERC1-211ENST00000560983 TDRD10Q5VZ19 366 aaKnown RBP4.88□□□□□ -1.63
HERC1-211ENST00000560983 UNC5AQ6ZN44 842 aa4.88□□□□□ -1.63
HERC1-211ENST00000560983 LSRQ86X29 649 aaPredicted RBP4.88□□□□□ -1.63
HERC1-211ENST00000560983 TIFAQ96CG3 184 aa4.88□□□□□ -1.63
HERC1-211ENST00000560983 WRNIP1Q96S55 665 aa4.88□□□□□ -1.63
HERC1-211ENST00000560983 POLR3GLQ9BT43 218 aa4.88□□□□□ -1.63
HERC1-211ENST00000560983 DSCC1Q9BVC3 393 aa4.88□□□□□ -1.63
HERC1-211ENST00000560983 BACH2Q9BYV9 841 aa4.88□□□□□ -1.63
HERC1-211ENST00000560983 SENP6Q9GZR1 1112 aaPredicted RBP4.88□□□□□ -1.63
HERC1-211ENST00000560983 PRDM12Q9H4Q4 367 aa4.88□□□□□ -1.63
HERC1-211ENST00000560983 TDRD3Q9H7E2 651 aaKnown RBP4.88□□□□□ -1.63
HERC1-211ENST00000560983 CD209Q9NNX6 404 aa4.88□□□□□ -1.63
HERC1-211ENST00000560983 ZNF214Q9UL59 606 aaPredicted RBP4.88□□□□□ -1.63
HERC1-211ENST00000560983 NCOR1O75376 2440 aa4.88□□□□□ -1.63
HERC1-211ENST00000560983 NUP98P52948 1817 aa4.88□□□□□ -1.63
HERC1-211ENST00000560983 ANKRD36CQ5JPF3 1778 aa4.87□□□□□ -1.63
HERC1-211ENST00000560983 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.87□□□□□ -1.63
HERC1-211ENST00000560983 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.87□□□□□ -1.63
HERC1-211ENST00000560983 TRIM43BA6NCK2 446 aa4.87□□□□□ -1.63
HERC1-211ENST00000560983 TCP10L2B9ZVM9 353 aa4.87□□□□□ -1.63
HERC1-211ENST00000560983 FFAR3O14843 346 aa4.87□□□□□ -1.63
HERC1-211ENST00000560983 BUB1BO60566 1050 aaPredicted RBP4.87□□□□□ -1.63
HERC1-211ENST00000560983 CYBBP04839 570 aa4.87□□□□□ -1.63
HERC1-211ENST00000560983 GSTM1P09488 218 aa4.87□□□□□ -1.63
HERC1-211ENST00000560983 RACK1P63244 317 aaKnown RBP4.87□□□□□ -1.63
HERC1-211ENST00000560983 TNFAIP1Q13829 316 aa4.87□□□□□ -1.63
HERC1-211ENST00000560983 SKOR2Q2VWA4 1001 aaPredicted RBP4.87□□□□□ -1.63
HERC1-211ENST00000560983 VWA3BQ502W6 1294 aa4.87□□□□□ -1.63
HERC1-211ENST00000560983 ZNF394Q53GI3 561 aa4.87□□□□□ -1.63
HERC1-211ENST00000560983 ZC3H14Q6PJT7 736 aaKnown RBP4.87□□□□□ -1.63
HERC1-211ENST00000560983 ANKRD18AQ8IVF6 992 aa4.87□□□□□ -1.63
HERC1-211ENST00000560983 PNISRQ8TF01 805 aaKnown RBP4.87□□□□□ -1.63
HERC1-211ENST00000560983 TRIB2Q92519 343 aa4.87□□□□□ -1.63
HERC1-211ENST00000560983 ANKS1AQ92625 1134 aa4.87□□□□□ -1.63
HERC1-211ENST00000560983 TRIM43Q96BQ3 446 aaPredicted RBP4.87□□□□□ -1.63
HERC1-211ENST00000560983 COA7Q96BR5 231 aa4.87□□□□□ -1.63
HERC1-211ENST00000560983 FCRL3Q96P31 734 aaPredicted RBP4.87□□□□□ -1.63
HERC1-211ENST00000560983 BCL11AQ9H165 835 aa4.87□□□□□ -1.63
HERC1-211ENST00000560983 DDX41Q9UJV9 622 aaKnown RBP4.87□□□□□ -1.63
HERC1-211ENST00000560983 ZNF451Q9Y4E5 1061 aa4.87□□□□□ -1.63
HERC1-211ENST00000560983 CHD9Q3L8U1 2897 aa4.87□□□□□ -1.63
HERC1-211ENST00000560983 CXCL11O14625 94 aa4.86□□□□□ -1.63
HERC1-211ENST00000560983 ERC2O15083 957 aa4.86□□□□□ -1.63
HERC1-211ENST00000560983 VAMP1P23763 118 aa4.86□□□□□ -1.63
HERC1-211ENST00000560983 CCND3P30281 292 aaPredicted RBP4.86□□□□□ -1.63
HERC1-211ENST00000560983 RBM5P52756 815 aaKnown RBP eCLIP4.86□□□□□ -1.63
HERC1-211ENST00000560983 FKBP1AP62942 108 aaKnown RBP4.86□□□□□ -1.63
HERC1-211ENST00000560983 CACNB2Q08289 660 aaPredicted RBP4.86□□□□□ -1.63
HERC1-211ENST00000560983 COL9A2Q14055 689 aaPredicted RBP4.86□□□□□ -1.63
HERC1-211ENST00000560983 CCDC152Q4G0S7 254 aa4.86□□□□□ -1.63
HERC1-211ENST00000560983 CWF19L1Q69YN2 538 aaKnown RBP4.86□□□□□ -1.63
HERC1-211ENST00000560983 RCSD1Q6JBY9 416 aa4.86□□□□□ -1.63
HERC1-211ENST00000560983 PAQR3Q6TCH7 311 aa4.86□□□□□ -1.63
HERC1-211ENST00000560983 RUFY4Q6ZNE9 571 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms