RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 SUFUQ9UMX1 484 aa9.3□□□□□ -0.92
CCDC33-209ENST00000560565 PTPN22Q9Y2R2 807 aa9.3□□□□□ -0.92
CCDC33-209ENST00000560565 GDAQ9Y2T3 454 aa9.3□□□□□ -0.92
CCDC33-209ENST00000560565 UTP11Q9Y3A2 253 aaKnown RBP9.3□□□□□ -0.92
CCDC33-209ENST00000560565 PCDHGC5Q9Y5F6 944 aa9.3□□□□□ -0.92
CCDC33-209ENST00000560565 DOCK3Q8IZD9 2030 aa9.3□□□□□ -0.92
CCDC33-209ENST00000560565 ADGRA2Q96PE1 1338 aa9.3□□□□□ -0.92
CCDC33-209ENST00000560565 LOXHD1Q8IVV2 1947 aa9.29□□□□□ -0.92
CCDC33-209ENST00000560565 A0A0A6YYK5 440 aaPredicted RBP9.29□□□□□ -0.92
CCDC33-209ENST00000560565 PNMA6FA0A0J9YX94 578 aa9.29□□□□□ -0.92
CCDC33-209ENST00000560565 F5H6K3 240 aa9.29□□□□□ -0.92
CCDC33-209ENST00000560565 PGRMC1O00264 195 aaKnown RBP9.29□□□□□ -0.92
CCDC33-209ENST00000560565 LIN7AO14910 233 aaPredicted RBP9.29□□□□□ -0.92
CCDC33-209ENST00000560565 ASAP2O43150 1006 aa9.29□□□□□ -0.92
CCDC33-209ENST00000560565 FLOT1O75955 427 aa9.29□□□□□ -0.92
CCDC33-209ENST00000560565 ECM2O94769 699 aaPredicted RBP9.29□□□□□ -0.92
CCDC33-209ENST00000560565 NDUFB10O96000 172 aa9.29□□□□□ -0.92
CCDC33-209ENST00000560565 BCRP11274 1271 aa9.29□□□□□ -0.92
CCDC33-209ENST00000560565 BMP3P12645 472 aa9.29□□□□□ -0.92
CCDC33-209ENST00000560565 HOXD10P28358 340 aa9.29□□□□□ -0.92
CCDC33-209ENST00000560565 GBP2P32456 591 aaPredicted RBP9.29□□□□□ -0.92
CCDC33-209ENST00000560565 CTNNA1P35221 906 aaKnown RBP9.29□□□□□ -0.92
CCDC33-209ENST00000560565 EIF4A3P38919 411 aaKnown RBP9.29□□□□□ -0.92
CCDC33-209ENST00000560565 SLC1A4P43007 532 aa9.29□□□□□ -0.92
CCDC33-209ENST00000560565 PSMC4P43686 418 aa9.29□□□□□ -0.92
CCDC33-209ENST00000560565 GCLCP48506 637 aaPredicted RBP9.29□□□□□ -0.92
CCDC33-209ENST00000560565 NPEPPSP55786 919 aa9.29□□□□□ -0.92
CCDC33-209ENST00000560565 FKBP3Q00688 224 aaKnown RBP9.29□□□□□ -0.92
CCDC33-209ENST00000560565 CAP1Q01518 475 aa9.29□□□□□ -0.92
CCDC33-209ENST00000560565 ATP2B2Q01814 1243 aa9.29□□□□□ -0.92
CCDC33-209ENST00000560565 KLRC3Q07444 240 aa9.29□□□□□ -0.92
CCDC33-209ENST00000560565 TDRD12Q587J7 1177 aaKnown RBP9.29□□□□□ -0.92
CCDC33-209ENST00000560565 MEI1Q5TIA1 1274 aa9.29□□□□□ -0.92
CCDC33-209ENST00000560565 FBXW10Q5XX13 1052 aa9.29□□□□□ -0.92
CCDC33-209ENST00000560565 TYW1BQ6NUM6 668 aa9.29□□□□□ -0.92
CCDC33-209ENST00000560565 CYB5D1Q6P9G0 228 aa9.29□□□□□ -0.92
CCDC33-209ENST00000560565 TAOK1Q7L7X3 1001 aa9.29□□□□□ -0.92
CCDC33-209ENST00000560565 CMTR1Q8N1G2 835 aaKnown RBP9.29□□□□□ -0.92
CCDC33-209ENST00000560565 KCTD17Q8N5Z5 321 aa9.29□□□□□ -0.92
CCDC33-209ENST00000560565 CCDC197Q8NCU1 140 aa9.29□□□□□ -0.92
CCDC33-209ENST00000560565 CFAP61Q8NHU2 1237 aa9.29□□□□□ -0.92
CCDC33-209ENST00000560565 RIN2Q8WYP3 895 aaPredicted RBP9.29□□□□□ -0.92
CCDC33-209ENST00000560565 LPAR1Q92633 364 aa9.29□□□□□ -0.92
CCDC33-209ENST00000560565 DDX12PQ92771 950 aa9.29□□□□□ -0.92
CCDC33-209ENST00000560565 KAT2BQ92831 832 aa9.29□□□□□ -0.92
CCDC33-209ENST00000560565 VTI1AQ96AJ9 217 aa9.29□□□□□ -0.92
CCDC33-209ENST00000560565 ZFP91Q96JP5 570 aaPredicted RBP9.29□□□□□ -0.92
CCDC33-209ENST00000560565 RNPC3Q96LT9 517 aaKnown RBP9.29□□□□□ -0.92
CCDC33-209ENST00000560565 TRIM9Q9C026 710 aa9.29□□□□□ -0.92
CCDC33-209ENST00000560565 ARHGAP39Q9C0H5 1083 aa9.29□□□□□ -0.92
CCDC33-209ENST00000560565 ASCC2Q9H1I8 757 aaPredicted RBP9.29□□□□□ -0.92
CCDC33-209ENST00000560565 MMRN2Q9H8L6 949 aa9.29□□□□□ -0.92
CCDC33-209ENST00000560565 C6orf50Q9HD87 102 aa9.29□□□□□ -0.92
CCDC33-209ENST00000560565 SLC40A1Q9NP59 571 aa9.29□□□□□ -0.92
CCDC33-209ENST00000560565 PNMA2Q9UL42 364 aa9.29□□□□□ -0.92
CCDC33-209ENST00000560565 MGAMO43451 1857 aa9.29□□□□□ -0.92
CCDC33-209ENST00000560565 BRCA2P51587 3418 aa9.29□□□□□ -0.92
CCDC33-209ENST00000560565 KDM3AQ9Y4C1 1321 aa9.29□□□□□ -0.92
CCDC33-209ENST00000560565 STXBP3O00186 592 aa9.28□□□□□ -0.92
CCDC33-209ENST00000560565 PDE2AO00408 941 aaPredicted RBP9.28□□□□□ -0.92
CCDC33-209ENST00000560565 KLRC4O43908 158 aa9.28□□□□□ -0.92
CCDC33-209ENST00000560565 BUB1BO60566 1050 aaPredicted RBP9.28□□□□□ -0.92
CCDC33-209ENST00000560565 MOCS3O95396 460 aa9.28□□□□□ -0.92
CCDC33-209ENST00000560565 CDC25AP30304 524 aa9.28□□□□□ -0.92
CCDC33-209ENST00000560565 ZNF131P52739 623 aa9.28□□□□□ -0.92
CCDC33-209ENST00000560565 PRMT2P55345 433 aa9.28□□□□□ -0.92
CCDC33-209ENST00000560565 FCGRTP55899 365 aa9.28□□□□□ -0.92
CCDC33-209ENST00000560565 IFT88Q13099 833 aa9.28□□□□□ -0.92
CCDC33-209ENST00000560565 BYSLQ13895 437 aaKnown RBP9.28□□□□□ -0.92
CCDC33-209ENST00000560565 HLTFQ14527 1009 aaKnown RBP eCLIP9.28□□□□□ -0.92
CCDC33-209ENST00000560565 PDIA5Q14554 519 aa9.28□□□□□ -0.92
CCDC33-209ENST00000560565 NONOQ15233 471 aaKnown RBP eCLIP9.28□□□□□ -0.92
CCDC33-209ENST00000560565 ZYXQ15942 572 aaKnown RBP9.28□□□□□ -0.92
CCDC33-209ENST00000560565 SLC18A3Q16572 532 aa9.28□□□□□ -0.92
CCDC33-209ENST00000560565 KCNV1Q6PIU1 500 aa9.28□□□□□ -0.92
CCDC33-209ENST00000560565 C6orf89Q6UWU4 347 aa9.28□□□□□ -0.92
CCDC33-209ENST00000560565 CEP128Q6ZU80 1094 aa9.28□□□□□ -0.92
CCDC33-209ENST00000560565 RRAGAQ7L523 313 aa9.28□□□□□ -0.92
CCDC33-209ENST00000560565 FAM160B2Q86V87 743 aa9.28□□□□□ -0.92
CCDC33-209ENST00000560565 ANKRD13CQ8N6S4 541 aa9.28□□□□□ -0.92
CCDC33-209ENST00000560565 USP38Q8NB14 1042 aa9.28□□□□□ -0.92
CCDC33-209ENST00000560565 ACER1Q8TDN7 264 aa9.28□□□□□ -0.92
CCDC33-209ENST00000560565 CHURC1Q8WUH1 139 aa9.28□□□□□ -0.92
CCDC33-209ENST00000560565 TCP11Q8WWU5 503 aa9.28□□□□□ -0.92
CCDC33-209ENST00000560565 IFT81Q8WYA0 676 aa9.28□□□□□ -0.92
CCDC33-209ENST00000560565 P2RX7Q99572 595 aaKnown RBP9.28□□□□□ -0.92
CCDC33-209ENST00000560565 DUSP9Q99956 384 aaKnown RBP9.28□□□□□ -0.92
CCDC33-209ENST00000560565 TRIM6Q9C030 488 aaPredicted RBP9.28□□□□□ -0.92
CCDC33-209ENST00000560565 KIAA1683Q9H0B3 1180 aa9.28□□□□□ -0.92
CCDC33-209ENST00000560565 ZMYND12Q9H0C1 365 aa9.28□□□□□ -0.92
CCDC33-209ENST00000560565 HOMER3Q9NSC5 361 aa9.28□□□□□ -0.92
CCDC33-209ENST00000560565 EMILIN3Q9NT22 766 aa9.28□□□□□ -0.92
CCDC33-209ENST00000560565 AGPAT5Q9NUQ2 364 aa9.28□□□□□ -0.92
CCDC33-209ENST00000560565 TRIM10Q9UDY6 481 aa9.28□□□□□ -0.92
CCDC33-209ENST00000560565 DMGDHQ9UI17 866 aaKnown RBP9.28□□□□□ -0.92
CCDC33-209ENST00000560565 PLAAQ9Y263 795 aa9.28□□□□□ -0.92
CCDC33-209ENST00000560565 SIK3Q9Y2K2 1263 aa9.28□□□□□ -0.92
CCDC33-209ENST00000560565 SAMM50Q9Y512 469 aa9.28□□□□□ -0.92
CCDC33-209ENST00000560565 WDR81Q562E7 1941 aa9.27□□□□□ -0.93
CCDC33-209ENST00000560565 ZNFX1Q9P2E3 1918 aaKnown RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms