RNA–Protein interactions for RNA: ENST00000559192.5

USP3-210, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 5,499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-210ENST00000559192 BYSLQ13895 437 aaKnown RBP7.63□□□□□ -1.19
USP3-210ENST00000559192 CERKLQ49MI3 558 aaPredicted RBP7.63□□□□□ -1.19
USP3-210ENST00000559192 MAP3K21Q5TCX8 1036 aa7.63□□□□□ -1.19
USP3-210ENST00000559192 SH3RF1Q7Z6J0 888 aa7.63□□□□□ -1.19
USP3-210ENST00000559192 RHOT2Q8IXI1 618 aa7.63□□□□□ -1.19
USP3-210ENST00000559192 BBOF1Q8ND07 529 aa7.63□□□□□ -1.19
USP3-210ENST00000559192 GLG1Q92896 1179 aa7.63□□□□□ -1.19
USP3-210ENST00000559192 ZKSCAN4Q969J2 545 aaPredicted RBP7.63□□□□□ -1.19
USP3-210ENST00000559192 CYTH2Q99418 400 aa7.63□□□□□ -1.19
USP3-210ENST00000559192 C1orf112Q9NSG2 853 aa7.63□□□□□ -1.19
USP3-210ENST00000559192 FGFR1OP2Q9NVK5 253 aa7.63□□□□□ -1.19
USP3-210ENST00000559192 ZFP69BQ9UJL9 534 aa7.63□□□□□ -1.19
USP3-210ENST00000559192 NUB1Q9Y5A7 615 aa7.63□□□□□ -1.19
USP3-210ENST00000559192 ZNF233A6NK53 670 aa7.63□□□□□ -1.19
USP3-210ENST00000559192 MAP3K7O43318 606 aa7.63□□□□□ -1.19
USP3-210ENST00000559192 SLC37A4O43826 429 aa7.63□□□□□ -1.19
USP3-210ENST00000559192 PAX7P23759 505 aa7.63□□□□□ -1.19
USP3-210ENST00000559192 KRT17Q04695 432 aa7.63□□□□□ -1.19
USP3-210ENST00000559192 IL17AQ16552 155 aa7.63□□□□□ -1.19
USP3-210ENST00000559192 ADGRF4Q8IZF3 695 aa7.63□□□□□ -1.19
USP3-210ENST00000559192 NSMCE1Q8WV22 266 aa7.63□□□□□ -1.19
USP3-210ENST00000559192 RFFLQ8WZ73 363 aa7.63□□□□□ -1.19
USP3-210ENST00000559192 DUSP9Q99956 384 aaKnown RBP7.63□□□□□ -1.19
USP3-210ENST00000559192 MRPL46Q9H2W6 279 aaKnown RBP7.63□□□□□ -1.19
USP3-210ENST00000559192 TXNDC16Q9P2K2 825 aa7.63□□□□□ -1.19
USP3-210ENST00000559192 DCTN4Q9UJW0 460 aa7.63□□□□□ -1.19
USP3-210ENST00000559192 FANCGO15287 622 aa7.63□□□□□ -1.19
USP3-210ENST00000559192 ATP6V1G2O95670 118 aa7.63□□□□□ -1.19
USP3-210ENST00000559192 KRT1P04264 644 aa7.63□□□□□ -1.19
USP3-210ENST00000559192 CHRNA3P32297 505 aa7.63□□□□□ -1.19
USP3-210ENST00000559192 SSTR3P32745 418 aaPredicted RBP7.63□□□□□ -1.19
USP3-210ENST00000559192 SERPINB6P35237 376 aa7.63□□□□□ -1.19
USP3-210ENST00000559192 GCLMP48507 274 aa7.63□□□□□ -1.19
USP3-210ENST00000559192 GRB10Q13322 594 aa7.63□□□□□ -1.19
USP3-210ENST00000559192 NAALADL2Q58DX5 795 aa7.63□□□□□ -1.19
USP3-210ENST00000559192 CLEC10AQ8IUN9 316 aa7.63□□□□□ -1.19
USP3-210ENST00000559192 MAML1Q92585 1016 aa7.63□□□□□ -1.19
USP3-210ENST00000559192 SGSM3Q96HU1 749 aa7.63□□□□□ -1.19
USP3-210ENST00000559192 ZNF577Q9BSK1 485 aa7.63□□□□□ -1.19
USP3-210ENST00000559192 TEKT3Q9BXF9 490 aa7.63□□□□□ -1.19
USP3-210ENST00000559192 PPP1R1BQ9UD71 204 aaPredicted RBP7.63□□□□□ -1.19
USP3-210ENST00000559192 FAM187AA6NFU0 413 aa7.62□□□□□ -1.19
USP3-210ENST00000559192 ATMINO43313 823 aaPredicted RBP7.62□□□□□ -1.19
USP3-210ENST00000559192 MYCNP04198 464 aaPredicted RBP7.62□□□□□ -1.19
USP3-210ENST00000559192 POLR2MP0CAP2 368 aa7.62□□□□□ -1.19
USP3-210ENST00000559192 GFAPP14136 432 aa7.62□□□□□ -1.19
USP3-210ENST00000559192 PRLRP16471 622 aa7.62□□□□□ -1.19
USP3-210ENST00000559192 MAN1A1P33908 653 aa7.62□□□□□ -1.19
USP3-210ENST00000559192 PBX1P40424 430 aa7.62□□□□□ -1.19
USP3-210ENST00000559192 PIK3CAP42336 1068 aa7.62□□□□□ -1.19
USP3-210ENST00000559192 GPC5P78333 572 aa7.62□□□□□ -1.19
USP3-210ENST00000559192 TRIM28Q13263 835 aaKnown RBP7.62□□□□□ -1.19
USP3-210ENST00000559192 SLC29A2Q14542 456 aa7.62□□□□□ -1.19
USP3-210ENST00000559192 MEI1Q5TIA1 1274 aa7.62□□□□□ -1.19
USP3-210ENST00000559192 JAMLQ86YT9 394 aa7.62□□□□□ -1.19
USP3-210ENST00000559192 KIAA0895Q8NCT3 520 aa7.62□□□□□ -1.19
USP3-210ENST00000559192 GDF3Q9NR23 364 aa7.62□□□□□ -1.19
USP3-210ENST00000559192 SLAIN2Q9P270 581 aa7.62□□□□□ -1.19
USP3-210ENST00000559192 TTC7AQ9ULT0 858 aaPredicted RBP7.62□□□□□ -1.19
USP3-210ENST00000559192 AGTP01019 485 aa7.62□□□□□ -1.19
USP3-210ENST00000559192 HNRNPCP07910 306 aaKnown RBP eCLIP7.62□□□□□ -1.199e-7■■■□□ 16.3
USP3-210ENST00000559192 YWHAGP61981 247 aaKnown RBP eCLIP7.62□□□□□ -1.19
USP3-210ENST00000559192 XKR9Q5GH70 373 aa7.62□□□□□ -1.19
USP3-210ENST00000559192 EP400NLQ6ZTU2 488 aa7.62□□□□□ -1.19
USP3-210ENST00000559192 ZNF564Q8TBZ8 553 aaPredicted RBP7.62□□□□□ -1.19
USP3-210ENST00000559192 C8orf37Q96NL8 207 aa7.62□□□□□ -1.19
USP3-210ENST00000559192 NT5C1BQ96P26 610 aa7.62□□□□□ -1.19
USP3-210ENST00000559192 NUDCD1Q96RS6 583 aa7.62□□□□□ -1.19
USP3-210ENST00000559192 FAM118BQ9BPY3 351 aa7.62□□□□□ -1.19
USP3-210ENST00000559192 ARHGEF10LQ9HCE6 1279 aa7.62□□□□□ -1.19
USP3-210ENST00000559192 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.62□□□□□ -1.19
USP3-210ENST00000559192 SSX2IPQ9Y2D8 614 aa7.62□□□□□ -1.19
USP3-210ENST00000559192 USP15Q9Y4E8 981 aaPredicted RBP7.62□□□□□ -1.19
USP3-210ENST00000559192 APOEP02649 317 aa7.62□□□□□ -1.19
USP3-210ENST00000559192 KLRK1P26718 216 aa7.62□□□□□ -1.19
USP3-210ENST00000559192 CDC25CP30307 473 aa7.62□□□□□ -1.19
USP3-210ENST00000559192 USP11P51784 963 aa7.62□□□□□ -1.19
USP3-210ENST00000559192 DHX34Q14147 1143 aaKnown RBP7.62□□□□□ -1.19
USP3-210ENST00000559192 FAM98CQ17RN3 349 aaKnown RBP7.62□□□□□ -1.19
USP3-210ENST00000559192 CASC4Q6P4E1 433 aa7.62□□□□□ -1.19
USP3-210ENST00000559192 NUDCD3Q8IVD9 361 aa7.62□□□□□ -1.19
USP3-210ENST00000559192 CEP70Q8NHQ1 597 aa7.62□□□□□ -1.19
USP3-210ENST00000559192 TPCN2Q8NHX9 752 aa7.62□□□□□ -1.19
USP3-210ENST00000559192 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.62□□□□□ -1.19
USP3-210ENST00000559192 FBXO41Q8TF61 875 aa7.62□□□□□ -1.19
USP3-210ENST00000559192 LRRC37BQ96QE4 947 aa7.62□□□□□ -1.19
USP3-210ENST00000559192 AMNQ9BXJ7 453 aa7.62□□□□□ -1.19
USP3-210ENST00000559192 TLR10Q9BXR5 811 aa7.62□□□□□ -1.19
USP3-210ENST00000559192 KBTBD4Q9NVX7 518 aa7.62□□□□□ -1.19
USP3-210ENST00000559192 BCAP29Q9UHQ4 241 aa7.62□□□□□ -1.19
USP3-210ENST00000559192 ANAPC7Q9UJX3 599 aa7.62□□□□□ -1.19
USP3-210ENST00000559192 OPLAHO14841 1288 aa7.62□□□□□ -1.19
USP3-210ENST00000559192 PHF2O75151 1096 aa7.62□□□□□ -1.19
USP3-210ENST00000559192 CDK17Q00537 523 aa7.62□□□□□ -1.19
USP3-210ENST00000559192 DYNC1I2Q13409 638 aaKnown RBP7.62□□□□□ -1.19
USP3-210ENST00000559192 MEA1Q16626 185 aa7.62□□□□□ -1.19
USP3-210ENST00000559192 GPATCH4Q5T3I0 446 aaKnown RBP7.62□□□□□ -1.19
USP3-210ENST00000559192 C12orf60Q5U649 245 aa7.62□□□□□ -1.19
USP3-210ENST00000559192 KIAA0825Q8IV33 1275 aa7.62□□□□□ -1.19
USP3-210ENST00000559192 C18orf8Q96DM3 657 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms