RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 SLC6A3Q01959 620 aa7.02□□□□□ -1.29
SCFD1-208ENST00000553278 RASSF7Q02833 373 aa7.02□□□□□ -1.29
SCFD1-208ENST00000553278 MYBPC3Q14896 1274 aa7.02□□□□□ -1.29
SCFD1-208ENST00000553278 SNX17Q15036 470 aa7.02□□□□□ -1.29
SCFD1-208ENST00000553278 SLC14A2Q15849 920 aa7.02□□□□□ -1.29
SCFD1-208ENST00000553278 MUM1L1Q5H9M0 696 aa7.02□□□□□ -1.29
SCFD1-208ENST00000553278 PRAMEF18Q5VWM3 479 aa7.02□□□□□ -1.29
SCFD1-208ENST00000553278 PPP4R3AQ6IN85 833 aa7.02□□□□□ -1.29
SCFD1-208ENST00000553278 GALNT18Q6P9A2 607 aa7.02□□□□□ -1.29
SCFD1-208ENST00000553278 CCDC174Q6PII3 467 aa7.02□□□□□ -1.29
SCFD1-208ENST00000553278 CEP128Q6ZU80 1094 aa7.02□□□□□ -1.29
SCFD1-208ENST00000553278 MIGA2Q7L4E1 593 aa7.02□□□□□ -1.29
SCFD1-208ENST00000553278 KANSL1Q7Z3B3 1105 aa7.02□□□□□ -1.29
SCFD1-208ENST00000553278 SLC41A1Q8IVJ1 513 aa7.02□□□□□ -1.29
SCFD1-208ENST00000553278 PLD6Q8N2A8 252 aaKnown RBP7.02□□□□□ -1.29
SCFD1-208ENST00000553278 KLHDC4Q8TBB5 520 aa7.02□□□□□ -1.29
SCFD1-208ENST00000553278 LINC01599Q8WXQ3 324 aa7.02□□□□□ -1.29
SCFD1-208ENST00000553278 PHKBQ93100 1093 aa7.02□□□□□ -1.29
SCFD1-208ENST00000553278 CDK5RAP3Q96JB5 506 aa7.02□□□□□ -1.29
SCFD1-208ENST00000553278 FOXB1Q99853 325 aa7.02□□□□□ -1.29
SCFD1-208ENST00000553278 DBNDD2Q9BQY9 259 aa7.02□□□□□ -1.29
SCFD1-208ENST00000553278 SSBP4Q9BWG4 385 aaPredicted RBP7.02□□□□□ -1.29
SCFD1-208ENST00000553278 LRRC27Q9C0I9 530 aa7.02□□□□□ -1.29
SCFD1-208ENST00000553278 TMX4Q9H1E5 349 aaPredicted RBP7.02□□□□□ -1.29
SCFD1-208ENST00000553278 CERS4Q9HA82 394 aa7.02□□□□□ -1.29
SCFD1-208ENST00000553278 AS3MTQ9HBK9 375 aa7.02□□□□□ -1.29
SCFD1-208ENST00000553278 DCP1AQ9NPI6 582 aaPredicted RBP7.02□□□□□ -1.29
SCFD1-208ENST00000553278 MAP3K20Q9NYL2 800 aaKnown RBP7.02□□□□□ -1.29
SCFD1-208ENST00000553278 C9orf78Q9NZ63 289 aaPredicted RBP7.02□□□□□ -1.29
SCFD1-208ENST00000553278 FBLN5Q9UBX5 448 aa7.02□□□□□ -1.29
SCFD1-208ENST00000553278 PRSS50Q9UI38 385 aa7.02□□□□□ -1.29
SCFD1-208ENST00000553278 CDY2AQ9Y6F7 541 aa7.02□□□□□ -1.29
SCFD1-208ENST00000553278 MYPNQ86TC9 1320 aa7.01□□□□□ -1.29
SCFD1-208ENST00000553278 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.01□□□□□ -1.29
SCFD1-208ENST00000553278 FOXN3O00409 490 aaPredicted RBP7.01□□□□□ -1.29
SCFD1-208ENST00000553278 USP2O75604 605 aaPredicted RBP7.01□□□□□ -1.29
SCFD1-208ENST00000553278 MYF5P13349 255 aa7.01□□□□□ -1.29
SCFD1-208ENST00000553278 CHKAP35790 457 aa7.01□□□□□ -1.29
SCFD1-208ENST00000553278 PPM1AP35813 382 aa7.01□□□□□ -1.29
SCFD1-208ENST00000553278 CASP5P51878 434 aa7.01□□□□□ -1.29
SCFD1-208ENST00000553278 PPARAQ07869 468 aa7.01□□□□□ -1.29
SCFD1-208ENST00000553278 C3orf36Q3SXR2 165 aa7.01□□□□□ -1.29
SCFD1-208ENST00000553278 IZUMO3Q5VZ72 239 aa7.01□□□□□ -1.29
SCFD1-208ENST00000553278 OXR1Q8N573 874 aa7.01□□□□□ -1.29
SCFD1-208ENST00000553278 TTLL11Q8NHH1 800 aa7.01□□□□□ -1.29
SCFD1-208ENST00000553278 UBE2Q2Q8WVN8 375 aa7.01□□□□□ -1.29
SCFD1-208ENST00000553278 RIN2Q8WYP3 895 aaPredicted RBP7.01□□□□□ -1.29
SCFD1-208ENST00000553278 RPGRQ92834 1020 aaKnown RBP7.01□□□□□ -1.29
SCFD1-208ENST00000553278 RGMAQ96B86 450 aa7.01□□□□□ -1.29
SCFD1-208ENST00000553278 HRASLS5Q96KN8 279 aa7.01□□□□□ -1.29
SCFD1-208ENST00000553278 ADI1Q9BV57 179 aa7.01□□□□□ -1.29
SCFD1-208ENST00000553278 STARD7Q9NQZ5 370 aa7.01□□□□□ -1.29
SCFD1-208ENST00000553278 GPRC5BQ9NZH0 403 aa7.01□□□□□ -1.29
SCFD1-208ENST00000553278 TPCN1Q9ULQ1 816 aa7.01□□□□□ -1.29
SCFD1-208ENST00000553278 PADI4Q9UM07 663 aa7.01□□□□□ -1.29
SCFD1-208ENST00000553278 SNX13Q9Y5W8 968 aa7.01□□□□□ -1.29
SCFD1-208ENST00000553278 A0A088AWK7 358 aa7□□□□□ -1.29
SCFD1-208ENST00000553278 ACOT7O00154 380 aa7□□□□□ -1.29
SCFD1-208ENST00000553278 KPNA5O15131 536 aa7□□□□□ -1.29
SCFD1-208ENST00000553278 SLC16A6O15403 523 aa7□□□□□ -1.29
SCFD1-208ENST00000553278 FRS3O43559 492 aa7□□□□□ -1.29
SCFD1-208ENST00000553278 TLR5O60602 858 aa7□□□□□ -1.29
SCFD1-208ENST00000553278 PCDH8O95206 1070 aa7□□□□□ -1.29
SCFD1-208ENST00000553278 FTLP02792 175 aaPredicted RBP7□□□□□ -1.29
SCFD1-208ENST00000553278 HSP90AA1P07900 732 aaKnown RBP7□□□□□ -1.29
SCFD1-208ENST00000553278 AOAHP28039 575 aa7□□□□□ -1.29
SCFD1-208ENST00000553278 IRX6P78412 446 aaPredicted RBP7□□□□□ -1.29
SCFD1-208ENST00000553278 MVKQ03426 396 aa7□□□□□ -1.29
SCFD1-208ENST00000553278 GRIN1Q05586 938 aa7□□□□□ -1.29
SCFD1-208ENST00000553278 ADRM1Q16186 407 aa7□□□□□ -1.29
SCFD1-208ENST00000553278 SWSAP1Q6NVH7 229 aa7□□□□□ -1.29
SCFD1-208ENST00000553278 UNQ6494/PRO21346Q6UXR6 183 aa7□□□□□ -1.29
SCFD1-208ENST00000553278 LDHAL6AQ6ZMR3 332 aa7□□□□□ -1.29
SCFD1-208ENST00000553278 LYSMD2Q8IV50 215 aa7□□□□□ -1.29
SCFD1-208ENST00000553278 ANKS4BQ8N8V4 417 aa7□□□□□ -1.29
SCFD1-208ENST00000553278 NETO2Q8NC67 525 aa7□□□□□ -1.29
SCFD1-208ENST00000553278 NUP43Q8NFH3 380 aa7□□□□□ -1.29
SCFD1-208ENST00000553278 APIPQ96GX9 242 aa7□□□□□ -1.29
SCFD1-208ENST00000553278 CDC5LQ99459 802 aaKnown RBP7□□□□□ -1.29
SCFD1-208ENST00000553278 DENND2AQ9ULE3 1009 aa7□□□□□ -1.29
SCFD1-208ENST00000553278 PALD1Q9ULE6 856 aa7□□□□□ -1.29
SCFD1-208ENST00000553278 CORO2BQ9UQ03 480 aa7□□□□□ -1.29
SCFD1-208ENST00000553278 NR2E3Q9Y5X4 410 aa7□□□□□ -1.29
SCFD1-208ENST00000553278 TCRBV5S2A0A599 114 aa6.99□□□□□ -1.29
SCFD1-208ENST00000553278 LRRC10BA6NIK2 292 aa6.99□□□□□ -1.29
SCFD1-208ENST00000553278 CYP26A1O43174 497 aa6.99□□□□□ -1.29
SCFD1-208ENST00000553278 HSD3B1P14060 373 aa6.99□□□□□ -1.29
SCFD1-208ENST00000553278 ABCB4P21439 1286 aa6.99□□□□□ -1.29
SCFD1-208ENST00000553278 MAP2K6P52564 334 aa6.99□□□□□ -1.29
SCFD1-208ENST00000553278 NFIAQ12857 509 aa6.99□□□□□ -1.29
SCFD1-208ENST00000553278 SLC4A8Q2Y0W8 1093 aa6.99□□□□□ -1.29
SCFD1-208ENST00000553278 TUBB8Q3ZCM7 444 aa6.99□□□□□ -1.29
SCFD1-208ENST00000553278 TLDC1Q6P9B6 456 aa6.99□□□□□ -1.29
SCFD1-208ENST00000553278 APOA5Q6Q788 366 aa6.99□□□□□ -1.29
SCFD1-208ENST00000553278 BTNL9Q6UXG8 535 aa6.99□□□□□ -1.29
SCFD1-208ENST00000553278 PRR23CQ6ZRP0 262 aa6.99□□□□□ -1.29
SCFD1-208ENST00000553278 MILR1Q7Z6M3 343 aa6.99□□□□□ -1.29
SCFD1-208ENST00000553278 TTC7BQ86TV6 843 aa6.99□□□□□ -1.29
SCFD1-208ENST00000553278 CALML6Q8TD86 181 aa6.99□□□□□ -1.29
SCFD1-208ENST00000553278 TP53INP1Q96A56 240 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms