RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 NLRP4Q96MN2 994 aa11.37□□□□□ -0.59
TRAFD1-208ENST00000552890 RAD9AQ99638 391 aa11.37□□□□□ -0.59
TRAFD1-208ENST00000552890 OSMRQ99650 979 aa11.37□□□□□ -0.59
TRAFD1-208ENST00000552890 ADAMTS10Q9H324 1103 aa11.37□□□□□ -0.59
TRAFD1-208ENST00000552890 ELAC1Q9H777 363 aaKnown RBP11.37□□□□□ -0.59
TRAFD1-208ENST00000552890 PRMT7Q9NVM4 692 aaPredicted RBP11.37□□□□□ -0.59
TRAFD1-208ENST00000552890 SEL1LQ9UBV2 794 aa11.37□□□□□ -0.59
TRAFD1-208ENST00000552890 FBXO2Q9UK22 296 aaPredicted RBP11.37□□□□□ -0.59
TRAFD1-208ENST00000552890 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.37□□□□□ -0.59
TRAFD1-208ENST00000552890 EVPLQ92817 2033 aa11.36□□□□□ -0.59
TRAFD1-208ENST00000552890 TBCAO75347 108 aaKnown RBP11.36□□□□□ -0.59
TRAFD1-208ENST00000552890 SSBP05455 408 aaKnown RBP eCLIP11.36□□□□□ -0.59
TRAFD1-208ENST00000552890 MYL1P05976 194 aa11.36□□□□□ -0.59
TRAFD1-208ENST00000552890 PLA2G4BP0C869 781 aa11.36□□□□□ -0.59
TRAFD1-208ENST00000552890 SRGAP2CP0DJJ0 459 aa11.36□□□□□ -0.59
TRAFD1-208ENST00000552890 CD52P31358 61 aa11.36□□□□□ -0.59
TRAFD1-208ENST00000552890 STAT6P42226 847 aa11.36□□□□□ -0.59
TRAFD1-208ENST00000552890 PTENP60484 403 aa11.36□□□□□ -0.59
TRAFD1-208ENST00000552890 WDR5P61964 334 aaKnown RBP11.36□□□□□ -0.59
TRAFD1-208ENST00000552890 MAPK6Q16659 721 aa11.36□□□□□ -0.59
TRAFD1-208ENST00000552890 ADALQ6DHV7 355 aa11.36□□□□□ -0.59
TRAFD1-208ENST00000552890 NOTUMQ6P988 496 aa11.36□□□□□ -0.59
TRAFD1-208ENST00000552890 STXBP4Q6ZWJ1 553 aa11.36□□□□□ -0.59
TRAFD1-208ENST00000552890 NPAS4Q8IUM7 802 aa11.36□□□□□ -0.59
TRAFD1-208ENST00000552890 HERC6Q8IVU3 1022 aa11.36□□□□□ -0.59
TRAFD1-208ENST00000552890 DEPTORQ8TB45 409 aa11.36□□□□□ -0.59
TRAFD1-208ENST00000552890 PPP1R13LQ8WUF5 828 aa11.36□□□□□ -0.59
TRAFD1-208ENST00000552890 SPIRE2Q8WWL2 714 aa11.36□□□□□ -0.59
TRAFD1-208ENST00000552890 WNT8BQ93098 351 aa11.36□□□□□ -0.59
TRAFD1-208ENST00000552890 TOP1MTQ969P6 601 aa11.36□□□□□ -0.59
TRAFD1-208ENST00000552890 TMEM143Q96AN5 459 aa11.36□□□□□ -0.59
TRAFD1-208ENST00000552890 ADPGKQ9BRR6 497 aa11.36□□□□□ -0.59
TRAFD1-208ENST00000552890 NTPCRQ9BSD7 190 aaKnown RBP11.36□□□□□ -0.59
TRAFD1-208ENST00000552890 CSRNP2Q9H175 543 aa11.36□□□□□ -0.59
TRAFD1-208ENST00000552890 POLR3FQ9H1D9 316 aaPredicted RBP11.36□□□□□ -0.59
TRAFD1-208ENST00000552890 SLC28A3Q9HAS3 691 aa11.36□□□□□ -0.59
TRAFD1-208ENST00000552890 CHMP5Q9NZZ3 219 aa11.36□□□□□ -0.59
TRAFD1-208ENST00000552890 WRAP73Q9P2S5 460 aaPredicted RBP11.36□□□□□ -0.59
TRAFD1-208ENST00000552890 TFIP11Q9UBB9 837 aaKnown RBP11.36□□□□□ -0.59
TRAFD1-208ENST00000552890 STK39Q9UEW8 545 aa11.36□□□□□ -0.59
TRAFD1-208ENST00000552890 HOOK1Q9UJC3 728 aaKnown RBP11.36□□□□□ -0.59
TRAFD1-208ENST00000552890 ST3GAL5Q9UNP4 418 aa11.36□□□□□ -0.59
TRAFD1-208ENST00000552890 PCDHB7Q9Y5E2 793 aa11.36□□□□□ -0.59
TRAFD1-208ENST00000552890 TLL1O43897 1013 aa11.35□□□□□ -0.59
TRAFD1-208ENST00000552890 GJB5O95377 273 aa11.35□□□□□ -0.59
TRAFD1-208ENST00000552890 GAP43P17677 238 aa11.35□□□□□ -0.59
TRAFD1-208ENST00000552890 SARSP49591 514 aaKnown RBP11.35□□□□□ -0.59
TRAFD1-208ENST00000552890 TMEM62Q0P6H9 643 aa11.35□□□□□ -0.59
TRAFD1-208ENST00000552890 MBTPS1Q14703 1052 aa11.35□□□□□ -0.59
TRAFD1-208ENST00000552890 IL17AQ16552 155 aa11.35□□□□□ -0.59
TRAFD1-208ENST00000552890 KYAT1Q16773 422 aa11.35□□□□□ -0.59
TRAFD1-208ENST00000552890 FAM187BQ17R55 369 aa11.35□□□□□ -0.59
TRAFD1-208ENST00000552890 ZNF697Q5TEC3 545 aa11.35□□□□□ -0.59
TRAFD1-208ENST00000552890 RINT1Q6NUQ1 792 aa11.35□□□□□ -0.59
TRAFD1-208ENST00000552890 KANK3Q6NY19 840 aa11.35□□□□□ -0.59
TRAFD1-208ENST00000552890 CEP57L1Q8IYX8 460 aa11.35□□□□□ -0.59
TRAFD1-208ENST00000552890 RAD54LQ92698 747 aa11.35□□□□□ -0.59
TRAFD1-208ENST00000552890 SYMPKQ92797 1274 aaKnown RBP11.35□□□□□ -0.59
TRAFD1-208ENST00000552890 CCDC47Q96A33 483 aaKnown RBP11.35□□□□□ -0.59
TRAFD1-208ENST00000552890 YME1L1Q96TA2 773 aa11.35□□□□□ -0.59
TRAFD1-208ENST00000552890 MMTAG2Q9BU76 263 aaKnown RBP11.35□□□□□ -0.59
TRAFD1-208ENST00000552890 GTPBP4Q9BZE4 634 aaKnown RBP11.35□□□□□ -0.59
TRAFD1-208ENST00000552890 TNMDQ9H2S6 317 aa11.35□□□□□ -0.59
TRAFD1-208ENST00000552890 PARVGQ9HBI0 331 aa11.35□□□□□ -0.59
TRAFD1-208ENST00000552890 ERVK-5Q9HDB9 667 aa11.35□□□□□ -0.59
TRAFD1-208ENST00000552890 AAASQ9NRG9 546 aa11.35□□□□□ -0.59
TRAFD1-208ENST00000552890 RGS18Q9NS28 235 aa11.35□□□□□ -0.59
TRAFD1-208ENST00000552890 ZMYM2Q9UBW7 1377 aa11.34□□□□□ -0.59
TRAFD1-208ENST00000552890 A0A087WZ62 844 aa11.34□□□□□ -0.59
TRAFD1-208ENST00000552890 A0A0U1RQF3 1178 aa11.34□□□□□ -0.59
TRAFD1-208ENST00000552890 A0A1W2PQ27 194 aa11.34□□□□□ -0.59
TRAFD1-208ENST00000552890 A0A1W2PQ64 194 aa11.34□□□□□ -0.59
TRAFD1-208ENST00000552890 A0A1W2PQD8 194 aa11.34□□□□□ -0.59
TRAFD1-208ENST00000552890 LRRIQ4A6NIV6 560 aa11.34□□□□□ -0.59
TRAFD1-208ENST00000552890 INO80B-WBP1J3KQ70 363 aa11.34□□□□□ -0.59
TRAFD1-208ENST00000552890 K7ERI5 159 aa11.34□□□□□ -0.59
TRAFD1-208ENST00000552890 ENPP3O14638 875 aa11.34□□□□□ -0.59
TRAFD1-208ENST00000552890 FAM13AO94988 1023 aa11.34□□□□□ -0.59
TRAFD1-208ENST00000552890 MAPTP10636 758 aaKnown RBP11.34□□□□□ -0.59
TRAFD1-208ENST00000552890 PLCG1P19174 1290 aa11.34□□□□□ -0.59
TRAFD1-208ENST00000552890 CMA1P23946 247 aa11.34□□□□□ -0.59
TRAFD1-208ENST00000552890 EPHB4P54760 987 aa11.34□□□□□ -0.59
TRAFD1-208ENST00000552890 SLC12A3P55017 1021 aa11.34□□□□□ -0.59
TRAFD1-208ENST00000552890 DNM1Q05193 864 aaKnown RBP11.34□□□□□ -0.59
TRAFD1-208ENST00000552890 STRN3Q13033 797 aa11.34□□□□□ -0.59
TRAFD1-208ENST00000552890 GRB10Q13322 594 aa11.34□□□□□ -0.59
TRAFD1-208ENST00000552890 ALCAMQ13740 583 aa11.34□□□□□ -0.59
TRAFD1-208ENST00000552890 TMEM132AQ24JP5 1023 aa11.34□□□□□ -0.59
TRAFD1-208ENST00000552890 C9orf50Q5SZB4 431 aa11.34□□□□□ -0.59
TRAFD1-208ENST00000552890 TWF2Q6IBS0 349 aaKnown RBP11.34□□□□□ -0.59
TRAFD1-208ENST00000552890 C1orf186Q6ZWK4 172 aa11.34□□□□□ -0.59
TRAFD1-208ENST00000552890 ABI1Q8IZP0 508 aa11.34□□□□□ -0.59
TRAFD1-208ENST00000552890 MYOCDQ8IZQ8 938 aa11.34□□□□□ -0.59
TRAFD1-208ENST00000552890 KCNN1Q92952 543 aa11.34□□□□□ -0.59
TRAFD1-208ENST00000552890 ADAM2Q99965 735 aa11.34□□□□□ -0.59
TRAFD1-208ENST00000552890 FDXACB1Q9BRP7 624 aaPredicted RBP11.34□□□□□ -0.59
TRAFD1-208ENST00000552890 MRPL9Q9BYD2 267 aaKnown RBP11.34□□□□□ -0.59
TRAFD1-208ENST00000552890 TRIM6Q9C030 488 aaPredicted RBP11.34□□□□□ -0.59
TRAFD1-208ENST00000552890 TMEM134Q9H6X4 195 aa11.34□□□□□ -0.59
TRAFD1-208ENST00000552890 IFT122Q9HBG6 1241 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms