RNA–Protein interactions for RNA: ENST00000547102.5

LINC00661-202, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best)

Gene LINC00661, Length 619 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-202ENST00000547102 LEXMQ3ZCV2 418 aa11.95□□□□□ -0.5
LINC00661-202ENST00000547102 XKR9Q5GH70 373 aa11.95□□□□□ -0.5
LINC00661-202ENST00000547102 TWF2Q6IBS0 349 aaKnown RBP11.95□□□□□ -0.5
LINC00661-202ENST00000547102 CATSPER4Q7RTX7 472 aa11.95□□□□□ -0.5
LINC00661-202ENST00000547102 ECHDC2Q86YB7 292 aa11.95□□□□□ -0.5
LINC00661-202ENST00000547102 THNSL1Q8IYQ7 743 aa11.95□□□□□ -0.5
LINC00661-202ENST00000547102 PABPC5Q96DU9 382 aaKnown RBP11.95□□□□□ -0.5
LINC00661-202ENST00000547102 MTRQ99707 1265 aa11.95□□□□□ -0.5
LINC00661-202ENST00000547102 EIF2AK1Q9BQI3 630 aaKnown RBP11.95□□□□□ -0.5
LINC00661-202ENST00000547102 FDXACB1Q9BRP7 624 aaPredicted RBP11.95□□□□□ -0.5
LINC00661-202ENST00000547102 FOXP1Q9H334 677 aaPredicted RBP11.95□□□□□ -0.5
LINC00661-202ENST00000547102 DHX33Q9H6R0 707 aaKnown RBP11.95□□□□□ -0.5
LINC00661-202ENST00000547102 BMP2KQ9NSY1 1161 aaPredicted RBP11.95□□□□□ -0.5
LINC00661-202ENST00000547102 CLDND1Q9NY35 253 aa11.95□□□□□ -0.5
LINC00661-202ENST00000547102 WRAP73Q9P2S5 460 aaPredicted RBP11.95□□□□□ -0.5
LINC00661-202ENST00000547102 NOL7Q9UMY1 257 aaKnown RBP11.95□□□□□ -0.5
LINC00661-202ENST00000547102 PIN4Q9Y237 131 aaKnown RBP11.95□□□□□ -0.5
LINC00661-202ENST00000547102 FAM50BQ9Y247 325 aa11.95□□□□□ -0.5
LINC00661-202ENST00000547102 KIF3AQ9Y496 699 aa11.95□□□□□ -0.5
LINC00661-202ENST00000547102 ATG2AQ2TAZ0 1938 aa11.94□□□□□ -0.5
LINC00661-202ENST00000547102 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.94□□□□□ -0.5
LINC00661-202ENST00000547102 A0A0U1RQF3 1178 aa11.94□□□□□ -0.5
LINC00661-202ENST00000547102 CSDE1O75534 798 aaKnown RBP11.94□□□□□ -0.5
LINC00661-202ENST00000547102 EOMESO95936 686 aa11.94□□□□□ -0.5
LINC00661-202ENST00000547102 ITGB1P05556 798 aa11.94□□□□□ -0.5
LINC00661-202ENST00000547102 SKIP12755 728 aa11.94□□□□□ -0.5
LINC00661-202ENST00000547102 PPM1AP35813 382 aa11.94□□□□□ -0.5
LINC00661-202ENST00000547102 RAB27AP51159 221 aa11.94□□□□□ -0.5
LINC00661-202ENST00000547102 UBE3AQ05086 875 aa11.94□□□□□ -0.5
LINC00661-202ENST00000547102 ORC2Q13416 577 aaPredicted RBP11.94□□□□□ -0.5
LINC00661-202ENST00000547102 COLGALT1Q8NBJ5 622 aa11.94□□□□□ -0.5
LINC00661-202ENST00000547102 FBXO18Q8NFZ0 1043 aa11.94□□□□□ -0.5
LINC00661-202ENST00000547102 ERMNQ8TAM6 284 aa11.94□□□□□ -0.5
LINC00661-202ENST00000547102 TMEM143Q96AN5 459 aa11.94□□□□□ -0.5
LINC00661-202ENST00000547102 NECAB3Q96P71 396 aaPredicted RBP11.94□□□□□ -0.5
LINC00661-202ENST00000547102 KIF2CQ99661 725 aa11.94□□□□□ -0.5
LINC00661-202ENST00000547102 MRPL9Q9BYD2 267 aaKnown RBP11.94□□□□□ -0.5
LINC00661-202ENST00000547102 TYW1Q9NV66 732 aaKnown RBP11.94□□□□□ -0.5
LINC00661-202ENST00000547102 MYO7AQ13402 2215 aa11.94□□□□□ -0.5
LINC00661-202ENST00000547102 H3BQ06 376 aaPredicted RBP11.93□□□□□ -0.5
LINC00661-202ENST00000547102 ASAP2O43150 1006 aa11.93□□□□□ -0.5
LINC00661-202ENST00000547102 DGAT1O75907 488 aa11.93□□□□□ -0.5
LINC00661-202ENST00000547102 SLITRK3O94933 977 aa11.93□□□□□ -0.5
LINC00661-202ENST00000547102 LYPLA2O95372 231 aa11.93□□□□□ -0.5
LINC00661-202ENST00000547102 OR52Z1P0C646 297 aa11.93□□□□□ -0.5
LINC00661-202ENST00000547102 SRGAP2CP0DJJ0 459 aa11.93□□□□□ -0.5
LINC00661-202ENST00000547102 PHKA2P46019 1235 aa11.93□□□□□ -0.5
LINC00661-202ENST00000547102 LAMTOR4Q0VGL1 99 aa11.93□□□□□ -0.5
LINC00661-202ENST00000547102 TFDP1Q14186 410 aa11.93□□□□□ -0.5
LINC00661-202ENST00000547102 TTC38Q5R3I4 469 aa11.93□□□□□ -0.5
LINC00661-202ENST00000547102 PTCRAQ6ISU1 281 aaPredicted RBP11.93□□□□□ -0.5
LINC00661-202ENST00000547102 SRGAP1Q7Z6B7 1085 aa11.93□□□□□ -0.5
LINC00661-202ENST00000547102 NOSTRINQ8IVI9 506 aa11.93□□□□□ -0.5
LINC00661-202ENST00000547102 KSR1Q8IVT5 923 aa11.93□□□□□ -0.5
LINC00661-202ENST00000547102 ZNF579Q8NAF0 562 aaKnown RBP11.93□□□□□ -0.5
LINC00661-202ENST00000547102 SPPL3Q8TCT6 385 aa11.93□□□□□ -0.5
LINC00661-202ENST00000547102 MICAL1Q8TDZ2 1067 aa11.93□□□□□ -0.5
LINC00661-202ENST00000547102 POF1BQ8WVV4 589 aa11.93□□□□□ -0.5
LINC00661-202ENST00000547102 PRPF31Q8WWY3 499 aaKnown RBP11.93□□□□□ -0.5
LINC00661-202ENST00000547102 RSPH1Q8WYR4 309 aa11.93□□□□□ -0.5
LINC00661-202ENST00000547102 ZNF558Q96NG5 402 aa11.93□□□□□ -0.5
LINC00661-202ENST00000547102 CASD1Q96PB1 797 aa11.93□□□□□ -0.5
LINC00661-202ENST00000547102 MTMR9Q96QG7 549 aa11.93□□□□□ -0.5
LINC00661-202ENST00000547102 ANKEF1Q9NU02 776 aa11.93□□□□□ -0.5
LINC00661-202ENST00000547102 SPTBN5Q9NRC6 3674 aaKnown RBP11.93□□□□□ -0.5
LINC00661-202ENST00000547102 FSD2A1L4K1 749 aa11.92□□□□□ -0.5
LINC00661-202ENST00000547102 POTEMA6NI47 508 aa11.92□□□□□ -0.5
LINC00661-202ENST00000547102 WNT7AO00755 349 aa11.92□□□□□ -0.5
LINC00661-202ENST00000547102 FGF18O76093 207 aa11.92□□□□□ -0.5
LINC00661-202ENST00000547102 ERLIN2O94905 339 aa11.92□□□□□ -0.5
LINC00661-202ENST00000547102 TRAPPC10P48553 1259 aa11.92□□□□□ -0.5
LINC00661-202ENST00000547102 HYAL1Q12794 435 aa11.92□□□□□ -0.5
LINC00661-202ENST00000547102 MXD4Q14582 209 aaPredicted RBP11.92□□□□□ -0.5
LINC00661-202ENST00000547102 ZNF174Q15697 407 aa11.92□□□□□ -0.5
LINC00661-202ENST00000547102 GLB1LQ6UWU2 654 aa11.92□□□□□ -0.5
LINC00661-202ENST00000547102 ZNF598Q86UK7 904 aaKnown RBP11.92□□□□□ -0.5
LINC00661-202ENST00000547102 FERMT3Q86UX7 667 aa11.92□□□□□ -0.5
LINC00661-202ENST00000547102 RNF149Q8NC42 400 aa11.92□□□□□ -0.5
LINC00661-202ENST00000547102 HELQQ8TDG4 1101 aa11.92□□□□□ -0.5
LINC00661-202ENST00000547102 HSD17B14Q9BPX1 270 aa11.92□□□□□ -0.5
LINC00661-202ENST00000547102 TMEM60Q9H2L4 133 aa11.92□□□□□ -0.5
LINC00661-202ENST00000547102 IGFLR1Q9H665 355 aa11.92□□□□□ -0.5
LINC00661-202ENST00000547102 IFT122Q9HBG6 1241 aa11.92□□□□□ -0.5
LINC00661-202ENST00000547102 TLR9Q9NR96 1032 aa11.92□□□□□ -0.5
LINC00661-202ENST00000547102 AGPAT5Q9NUQ2 364 aa11.92□□□□□ -0.5
LINC00661-202ENST00000547102 PUF60Q9UHX1 559 aaKnown RBP11.92□□□□□ -0.5
LINC00661-202ENST00000547102 REV3LO60673 3130 aa11.92□□□□□ -0.5
LINC00661-202ENST00000547102 PLXNA4Q9HCM2 1894 aa11.91□□□□□ -0.5
LINC00661-202ENST00000547102 CARNS1A5YM72 827 aa11.91□□□□□ -0.5
LINC00661-202ENST00000547102 ZBTB39O15060 712 aa11.91□□□□□ -0.5
LINC00661-202ENST00000547102 DNAJB1P25685 340 aa11.91□□□□□ -0.5
LINC00661-202ENST00000547102 NDUFV1P49821 464 aa11.91□□□□□ -0.5
LINC00661-202ENST00000547102 KRT17Q04695 432 aa11.91□□□□□ -0.5
LINC00661-202ENST00000547102 NCBP1Q09161 790 aaKnown RBP11.91□□□□□ -0.5
LINC00661-202ENST00000547102 COL19A1Q14993 1142 aa11.91□□□□□ -0.5
LINC00661-202ENST00000547102 PCBP1Q15365 356 aaKnown RBP eCLIP11.91□□□□□ -0.5
LINC00661-202ENST00000547102 CLLU1OSQ5K130 101 aa11.91□□□□□ -0.5
LINC00661-202ENST00000547102 HAUS3Q68CZ6 603 aa11.91□□□□□ -0.5
LINC00661-202ENST00000547102 PDE12Q6L8Q7 609 aaKnown RBP11.91□□□□□ -0.5
LINC00661-202ENST00000547102 KCNT2Q6UVM3 1135 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms