RNA–Protein interactions for RNA: ENST00000545425.2

FOXA1-202, Transcript of forkhead box A1, humanhuman

TSL 2

Gene FOXA1, Length 1,806 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-202ENST00000545425 TCEAL1Q15170 157 aa25.26■■□□□ 1.63
FOXA1-202ENST00000545425 ARFGAP2Q8N6H7 521 aa25.26■■□□□ 1.63
FOXA1-202ENST00000545425 SAMD3Q8N6K7 520 aa25.26■■□□□ 1.63
FOXA1-202ENST00000545425 CCDC43Q96MW1 224 aaKnown RBP25.26■■□□□ 1.63
FOXA1-202ENST00000545425 WDR18Q9BV38 432 aa25.26■■□□□ 1.63
FOXA1-202ENST00000545425 RGL1Q9NZL6 768 aa25.26■■□□□ 1.63
FOXA1-202ENST00000545425 AMFRQ9UKV5 643 aa25.26■■□□□ 1.63
FOXA1-202ENST00000545425 DDX3XO00571 662 aaKnown RBP eCLIP25.26■■□□□ 1.635e-7■□□□□ 11.3
FOXA1-202ENST00000545425 RAD51CO43502 376 aa25.26■■□□□ 1.63
FOXA1-202ENST00000545425 CEP104O60308 925 aa25.26■■□□□ 1.63
FOXA1-202ENST00000545425 CASP4P49662 377 aa25.26■■□□□ 1.63
FOXA1-202ENST00000545425 HADHBP55084 474 aaKnown RBP25.26■■□□□ 1.63
FOXA1-202ENST00000545425 CORO7P57737 925 aa25.26■■□□□ 1.63
FOXA1-202ENST00000545425 FKBP1CQ5VVH2 108 aa25.26■■□□□ 1.63
FOXA1-202ENST00000545425 B3GNT9Q6UX72 402 aa25.26■■□□□ 1.63
FOXA1-202ENST00000545425 TPH2Q8IWU9 490 aa25.26■■□□□ 1.63
FOXA1-202ENST00000545425 C12orf56Q8IXR9 622 aa25.26■■□□□ 1.63
FOXA1-202ENST00000545425 KLRG1Q96E93 195 aa25.26■■□□□ 1.63
FOXA1-202ENST00000545425 HES6Q96HZ4 224 aa25.26■■□□□ 1.63
FOXA1-202ENST00000545425 TIPINQ9BVW5 301 aa25.26■■□□□ 1.63
FOXA1-202ENST00000545425 RBBP6Q7Z6E9 1792 aaKnown RBP25.25■■□□□ 1.63
FOXA1-202ENST00000545425 MAPK13O15264 365 aa25.25■■□□□ 1.63
FOXA1-202ENST00000545425 TBC1D12O60347 775 aa25.25■■□□□ 1.63
FOXA1-202ENST00000545425 MAGEA9P43362 315 aa25.25■■□□□ 1.63
FOXA1-202ENST00000545425 CETN1Q12798 172 aa25.25■■□□□ 1.63
FOXA1-202ENST00000545425 SHROOM1Q2M3G4 852 aaPredicted RBP25.25■■□□□ 1.63
FOXA1-202ENST00000545425 SLC17A8Q8NDX2 589 aa25.25■■□□□ 1.63
FOXA1-202ENST00000545425 FAM151AQ8WW52 585 aa25.25■■□□□ 1.63
FOXA1-202ENST00000545425 IFT81Q8WYA0 676 aa25.25■■□□□ 1.63
FOXA1-202ENST00000545425 STRA6Q9BX79 667 aa25.25■■□□□ 1.63
FOXA1-202ENST00000545425 TDRD3Q9H7E2 651 aaKnown RBP25.25■■□□□ 1.63
FOXA1-202ENST00000545425 TMEM206Q9H813 350 aa25.25■■□□□ 1.63
FOXA1-202ENST00000545425 AGPAT3Q9NRZ7 376 aa25.25■■□□□ 1.63
FOXA1-202ENST00000545425 RSPH14Q9UHP6 348 aa25.25■■□□□ 1.63
FOXA1-202ENST00000545425 FEM1BQ9UK73 627 aa25.25■■□□□ 1.63
FOXA1-202ENST00000545425 A0A1W2PRG0 241 aa25.24■■□□□ 1.63
FOXA1-202ENST00000545425 GOLGA6L10A6NI86 522 aa25.24■■□□□ 1.63
FOXA1-202ENST00000545425 HIRAP54198 1017 aaPredicted RBP25.24■■□□□ 1.63
FOXA1-202ENST00000545425 CTTNQ14247 550 aaKnown RBP25.24■■□□□ 1.63
FOXA1-202ENST00000545425 ENOX2Q16206 610 aaKnown RBP25.24■■□□□ 1.63
FOXA1-202ENST00000545425 TRPM4Q8TD43 1214 aa25.24■■□□□ 1.63
FOXA1-202ENST00000545425 SEC14L1Q92503 715 aa25.24■■□□□ 1.63
FOXA1-202ENST00000545425 FIZ1Q96SL8 496 aa25.24■■□□□ 1.63
FOXA1-202ENST00000545425 FAM114A2Q9NRY5 505 aa25.24■■□□□ 1.63
FOXA1-202ENST00000545425 APEX2Q9UBZ4 518 aa25.24■■□□□ 1.63
FOXA1-202ENST00000545425 PFASO15067 1338 aa25.24■■□□□ 1.63
FOXA1-202ENST00000545425 TMEM88BA6NKF7 163 aa25.23■■□□□ 1.63
FOXA1-202ENST00000545425 EBAG9O00559 213 aa25.23■■□□□ 1.63
FOXA1-202ENST00000545425 PMM2O15305 246 aa25.23■■□□□ 1.63
FOXA1-202ENST00000545425 EVI5O60447 810 aa25.23■■□□□ 1.63
FOXA1-202ENST00000545425 SNAP25P60880 206 aa25.23■■□□□ 1.63
FOXA1-202ENST00000545425 TTMPQ5BVD1 217 aa25.23■■□□□ 1.63
FOXA1-202ENST00000545425 NT5DC3Q86UY8 548 aa25.23■■□□□ 1.63
FOXA1-202ENST00000545425 GPIHBP1Q8IV16 184 aa25.23■■□□□ 1.63
FOXA1-202ENST00000545425 EFCAB13Q8IY85 973 aa25.23■■□□□ 1.63
FOXA1-202ENST00000545425 METTL13Q8N6R0 699 aa25.23■■□□□ 1.63
FOXA1-202ENST00000545425 CTNNBL1Q8WYA6 563 aaPredicted RBP25.23■■□□□ 1.63
FOXA1-202ENST00000545425 SYT11Q9BT88 431 aa25.23■■□□□ 1.63
FOXA1-202ENST00000545425 NOC2LQ9Y3T9 749 aaKnown RBP25.23■■□□□ 1.63
FOXA1-202ENST00000545425 CLIC2O15247 247 aa25.23■■□□□ 1.63
FOXA1-202ENST00000545425 PPP1R37O75864 691 aa25.23■■□□□ 1.63
FOXA1-202ENST00000545425 CFBP00751 764 aa25.23■■□□□ 1.63
FOXA1-202ENST00000545425 GNGT1P63211 74 aa25.23■■□□□ 1.63
FOXA1-202ENST00000545425 KIF22Q14807 665 aa25.23■■□□□ 1.63
FOXA1-202ENST00000545425 SAMD7Q7Z3H4 446 aa25.23■■□□□ 1.63
FOXA1-202ENST00000545425 CYP2W1Q8TAV3 490 aa25.23■■□□□ 1.63
FOXA1-202ENST00000545425 U2AF1L4Q8WU68 220 aaKnown RBP25.23■■□□□ 1.63
FOXA1-202ENST00000545425 UIMC1Q96RL1 719 aa25.23■■□□□ 1.63
FOXA1-202ENST00000545425 ZNF577Q9BSK1 485 aa25.23■■□□□ 1.63
FOXA1-202ENST00000545425 DNAJC12Q9UKB3 198 aa25.23■■□□□ 1.63
FOXA1-202ENST00000545425 ARHGEF35A5YM69 484 aa25.22■■□□□ 1.63
FOXA1-202ENST00000545425 SLURP2P0DP57 97 aa25.22■■□□□ 1.63
FOXA1-202ENST00000545425 KRT13P13646 458 aa25.22■■□□□ 1.63
FOXA1-202ENST00000545425 ZNF280AP59817 542 aaPredicted RBP25.22■■□□□ 1.63
FOXA1-202ENST00000545425 MYL7Q01449 175 aa25.22■■□□□ 1.63
FOXA1-202ENST00000545425 RUFY4Q6ZNE9 571 aa25.22■■□□□ 1.63
FOXA1-202ENST00000545425 INTS8Q75QN2 995 aaKnown RBP25.22■■□□□ 1.63
FOXA1-202ENST00000545425 B4GALNT4Q76KP1 1039 aa25.22■■□□□ 1.63
FOXA1-202ENST00000545425 RHOT2Q8IXI1 618 aa25.22■■□□□ 1.63
FOXA1-202ENST00000545425 ATP6V1G3Q96LB4 118 aa25.22■■□□□ 1.63
FOXA1-202ENST00000545425 GMLQ99445 158 aa25.22■■□□□ 1.63
FOXA1-202ENST00000545425 INTS2Q9H0H0 1204 aaKnown RBP25.22■■□□□ 1.63
FOXA1-202ENST00000545425 CARD9Q9H257 536 aa25.22■■□□□ 1.63
FOXA1-202ENST00000545425 VCPKMTQ9H867 229 aa25.22■■□□□ 1.63
FOXA1-202ENST00000545425 DBR1Q9UK59 544 aaKnown RBP25.22■■□□□ 1.63
FOXA1-202ENST00000545425 PNMA2Q9UL42 364 aa25.22■■□□□ 1.63
FOXA1-202ENST00000545425 USP20Q9Y2K6 914 aa25.22■■□□□ 1.63
FOXA1-202ENST00000545425 PCDHAC2Q9Y5I4 1007 aa25.22■■□□□ 1.63
FOXA1-202ENST00000545425 KRIT1O00522 736 aa25.21■■□□□ 1.63
FOXA1-202ENST00000545425 NMT1P30419 496 aaKnown RBP25.21■■□□□ 1.63
FOXA1-202ENST00000545425 GALCP54803 685 aa25.21■■□□□ 1.63
FOXA1-202ENST00000545425 MCCD1P59942 119 aaPredicted RBP25.21■■□□□ 1.63
FOXA1-202ENST00000545425 GHRHRQ02643 423 aa25.21■■□□□ 1.63
FOXA1-202ENST00000545425 BIRC3Q13489 604 aa25.21■■□□□ 1.63
FOXA1-202ENST00000545425 DRAP1Q14919 205 aaPredicted RBP25.21■■□□□ 1.63
FOXA1-202ENST00000545425 TBC1D10BQ4KMP7 808 aaPredicted RBP25.21■■□□□ 1.63
FOXA1-202ENST00000545425 ODR4Q5SWX8 454 aa25.21■■□□□ 1.63
FOXA1-202ENST00000545425 DAAM2Q86T65 1068 aa25.21■■□□□ 1.63
FOXA1-202ENST00000545425 PIGOQ8TEQ8 1089 aa25.21■■□□□ 1.63
FOXA1-202ENST00000545425 PPM1EQ8WY54 764 aa25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms