RNA–Protein interactions for RNA: ENST00000543469.1

TRIM59-208, Transcript of tripartite motif containing 59, humanhuman

TSL 5 BASIC

Gene TRIM59, Length 4,615 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-208ENST00000543469 JAG1P78504 1218 aa8.69□□□□□ -1.02
TRIM59-208ENST00000543469 CNTN2Q02246 1040 aa8.69□□□□□ -1.02
TRIM59-208ENST00000543469 RAD51AP2Q09MP3 1159 aa8.69□□□□□ -1.02
TRIM59-208ENST00000543469 FSCN1Q16658 493 aaKnown RBP8.69□□□□□ -1.02
TRIM59-208ENST00000543469 ZPBP2Q6X784 338 aa8.69□□□□□ -1.02
TRIM59-208ENST00000543469 BEST2Q8NFU1 509 aa8.69□□□□□ -1.02
TRIM59-208ENST00000543469 SLC38A7Q9NVC3 462 aa8.69□□□□□ -1.02
TRIM59-208ENST00000543469 TAB2Q9NYJ8 693 aa8.69□□□□□ -1.02
TRIM59-208ENST00000543469 LIMA1Q9UHB6 759 aaKnown RBP8.69□□□□□ -1.02
TRIM59-208ENST00000543469 MOXD2PA6NHM9 499 aa8.69□□□□□ -1.02
TRIM59-208ENST00000543469 H3BRB1 525 aa8.69□□□□□ -1.02
TRIM59-208ENST00000543469 CDC25AP30304 524 aa8.69□□□□□ -1.02
TRIM59-208ENST00000543469 POU5F1BQ06416 359 aa8.69□□□□□ -1.02
TRIM59-208ENST00000543469 MFSD10Q14728 455 aa8.69□□□□□ -1.02
TRIM59-208ENST00000543469 E2F4Q16254 413 aa8.69□□□□□ -1.02
TRIM59-208ENST00000543469 MORC4Q8TE76 937 aa8.69□□□□□ -1.02
TRIM59-208ENST00000543469 DHX38Q92620 1227 aaKnown RBP8.69□□□□□ -1.02
TRIM59-208ENST00000543469 EMID1Q96A84 441 aaPredicted RBP8.69□□□□□ -1.02
TRIM59-208ENST00000543469 HSD17B14Q9BPX1 270 aa8.69□□□□□ -1.02
TRIM59-208ENST00000543469 TSEN34Q9BSV6 310 aaKnown RBP8.69□□□□□ -1.02
TRIM59-208ENST00000543469 TUT1Q9H6E5 874 aaKnown RBP8.69□□□□□ -1.02
TRIM59-208ENST00000543469 XPNPEP3Q9NQH7 507 aa8.69□□□□□ -1.02
TRIM59-208ENST00000543469 PP2D1A8MPX8 630 aa8.69□□□□□ -1.02
TRIM59-208ENST00000543469 MARK3P27448 753 aa8.69□□□□□ -1.02
TRIM59-208ENST00000543469 NFIL3Q16649 462 aa8.69□□□□□ -1.02
TRIM59-208ENST00000543469 CYP4F22Q6NT55 531 aa8.69□□□□□ -1.02
TRIM59-208ENST00000543469 METTL23Q86XA0 190 aa8.69□□□□□ -1.02
TRIM59-208ENST00000543469 ABI1Q8IZP0 508 aa8.69□□□□□ -1.02
TRIM59-208ENST00000543469 FAM43AQ8N2R8 423 aa8.69□□□□□ -1.02
TRIM59-208ENST00000543469 USP38Q8NB14 1042 aa8.69□□□□□ -1.02
TRIM59-208ENST00000543469 OR8K1Q8NGG5 319 aa8.69□□□□□ -1.02
TRIM59-208ENST00000543469 PXYLP1Q8TE99 480 aa8.69□□□□□ -1.02
TRIM59-208ENST00000543469 ZNF560Q96MR9 790 aa8.69□□□□□ -1.02
TRIM59-208ENST00000543469 PNMA5Q96PV4 448 aa8.69□□□□□ -1.02
TRIM59-208ENST00000543469 VPS16Q9H269 839 aa8.69□□□□□ -1.02
TRIM59-208ENST00000543469 FANCLQ9NW38 375 aa8.69□□□□□ -1.02
TRIM59-208ENST00000543469 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.69□□□□□ -1.02
TRIM59-208ENST00000543469 MYO5AQ9Y4I1 1855 aaKnown RBP8.69□□□□□ -1.02
TRIM59-208ENST00000543469 LGALS16A8MUM7 142 aa8.69□□□□□ -1.02
TRIM59-208ENST00000543469 TRPA1O75762 1119 aa8.69□□□□□ -1.02
TRIM59-208ENST00000543469 KCNA2P16389 499 aa8.69□□□□□ -1.02
TRIM59-208ENST00000543469 EDNRBP24530 442 aa8.69□□□□□ -1.02
TRIM59-208ENST00000543469 PRCPP42785 496 aa8.69□□□□□ -1.02
TRIM59-208ENST00000543469 RARRES1P49788 294 aa8.69□□□□□ -1.02
TRIM59-208ENST00000543469 MXI1P50539 228 aa8.69□□□□□ -1.02
TRIM59-208ENST00000543469 GIT2Q14161 759 aa8.69□□□□□ -1.02
TRIM59-208ENST00000543469 RASGRP2Q7LDG7 609 aa8.69□□□□□ -1.02
TRIM59-208ENST00000543469 CNKSR2Q8WXI2 1034 aa8.69□□□□□ -1.02
TRIM59-208ENST00000543469 FAM212AQ96EL1 285 aa8.69□□□□□ -1.02
TRIM59-208ENST00000543469 ST6GALNAC4Q9H4F1 302 aa8.69□□□□□ -1.02
TRIM59-208ENST00000543469 DCDC2CA8MYV0 355 aa8.68□□□□□ -1.02
TRIM59-208ENST00000543469 SEPT4O43236 478 aa8.68□□□□□ -1.02
TRIM59-208ENST00000543469 MED7O43513 233 aa8.68□□□□□ -1.02
TRIM59-208ENST00000543469 FARP2O94887 1054 aaPredicted RBP8.68□□□□□ -1.02
TRIM59-208ENST00000543469 ITGBL1O95965 494 aaPredicted RBP8.68□□□□□ -1.02
TRIM59-208ENST00000543469 LGALS2P05162 132 aa8.68□□□□□ -1.02
TRIM59-208ENST00000543469 ITGB5P18084 799 aa8.68□□□□□ -1.02
TRIM59-208ENST00000543469 EFCAB12Q6NXP0 572 aa8.68□□□□□ -1.02
TRIM59-208ENST00000543469 NOTUMQ6P988 496 aa8.68□□□□□ -1.02
TRIM59-208ENST00000543469 ABHD15Q6UXT9 468 aa8.68□□□□□ -1.02
TRIM59-208ENST00000543469 GJA10Q969M2 543 aa8.68□□□□□ -1.02
TRIM59-208ENST00000543469 NLRP4Q96MN2 994 aa8.68□□□□□ -1.02
TRIM59-208ENST00000543469 NCAPGQ9BPX3 1015 aa8.68□□□□□ -1.02
TRIM59-208ENST00000543469 SRRDQ9UH36 339 aa8.68□□□□□ -1.02
TRIM59-208ENST00000543469 ITIH6Q6UXX5 1313 aa8.68□□□□□ -1.02
TRIM59-208ENST00000543469 SOWAHBA6NEL2 793 aa8.68□□□□□ -1.02
TRIM59-208ENST00000543469 EXTL3O43909 919 aa8.68□□□□□ -1.02
TRIM59-208ENST00000543469 DTNBO60941 627 aa8.68□□□□□ -1.02
TRIM59-208ENST00000543469 GFPT2O94808 682 aa8.68□□□□□ -1.02
TRIM59-208ENST00000543469 ACTN1P12814 892 aa8.68□□□□□ -1.02
TRIM59-208ENST00000543469 TNFAIP3P21580 790 aa8.68□□□□□ -1.02
TRIM59-208ENST00000543469 SARSP49591 514 aaKnown RBP8.68□□□□□ -1.02
TRIM59-208ENST00000543469 LACTBP83111 547 aaPredicted RBP8.68□□□□□ -1.02
TRIM59-208ENST00000543469 ZNF568Q3ZCX4 644 aa8.68□□□□□ -1.02
TRIM59-208ENST00000543469 EARS2Q5JPH6 523 aaKnown RBP8.68□□□□□ -1.02
TRIM59-208ENST00000543469 RHPN2Q8IUC4 686 aa8.68□□□□□ -1.02
TRIM59-208ENST00000543469 MNS1Q8NEH6 495 aa8.68□□□□□ -1.02
TRIM59-208ENST00000543469 TMC2Q8TDI7 906 aa8.68□□□□□ -1.02
TRIM59-208ENST00000543469 AFG1LQ8WV93 481 aa8.68□□□□□ -1.02
TRIM59-208ENST00000543469 BAG1Q99933 345 aaPredicted RBP8.68□□□□□ -1.02
TRIM59-208ENST00000543469 SLC16A4O15374 487 aa8.68□□□□□ -1.02
TRIM59-208ENST00000543469 TACC1O75410 805 aa8.68□□□□□ -1.02
TRIM59-208ENST00000543469 MAFO75444 373 aaPredicted RBP8.68□□□□□ -1.02
TRIM59-208ENST00000543469 LGR5O75473 907 aa8.68□□□□□ -1.02
TRIM59-208ENST00000543469 HARSP12081 509 aaKnown RBP8.68□□□□□ -1.02
TRIM59-208ENST00000543469 USP8P40818 1118 aa8.68□□□□□ -1.02
TRIM59-208ENST00000543469 PIK3CAP42336 1068 aa8.68□□□□□ -1.02
TRIM59-208ENST00000543469 SLC12A3P55017 1021 aa8.68□□□□□ -1.02
TRIM59-208ENST00000543469 CRHR2Q13324 411 aa8.68□□□□□ -1.02
TRIM59-208ENST00000543469 SHROOM1Q2M3G4 852 aaPredicted RBP8.68□□□□□ -1.02
TRIM59-208ENST00000543469 KIAA1755Q5JYT7 1200 aa8.68□□□□□ -1.02
TRIM59-208ENST00000543469 ZNF507Q8TCN5 953 aa8.68□□□□□ -1.02
TRIM59-208ENST00000543469 PPP1R9BQ96SB3 815 aa8.68□□□□□ -1.02
TRIM59-208ENST00000543469 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.68□□□□□ -1.02
TRIM59-208ENST00000543469 LSM14BQ9BX40 385 aaKnown RBP8.68□□□□□ -1.02
TRIM59-208ENST00000543469 FZD1Q9UP38 647 aa8.68□□□□□ -1.02
TRIM59-208ENST00000543469 MAPK8IP1Q9UQF2 711 aa8.68□□□□□ -1.02
TRIM59-208ENST00000543469 ZC3H11AO75152 810 aaKnown RBP eCLIP8.68□□□□□ -1.023e-10■□□□□ 9.4
TRIM59-208ENST00000543469 CD4P01730 458 aa8.68□□□□□ -1.02
TRIM59-208ENST00000543469 SRGAP2CP0DJJ0 459 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms