RNA–Protein interactions for RNA: ENST00000543449.1

NPIPB4-217, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 3

Gene NPIPB4, Length 685 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-217ENST00000543449 MCPH1Q8NEM0 835 aa11.46□□□□□ -0.57
NPIPB4-217ENST00000543449 HLA-CQ95604 372 aa11.46□□□□□ -0.57
NPIPB4-217ENST00000543449 NLRP4Q96MN2 994 aa11.46□□□□□ -0.57
NPIPB4-217ENST00000543449 FDXACB1Q9BRP7 624 aaPredicted RBP11.46□□□□□ -0.57
NPIPB4-217ENST00000543449 MRPL9Q9BYD2 267 aaKnown RBP11.46□□□□□ -0.57
NPIPB4-217ENST00000543449 TMEM117Q9H0C3 514 aa11.46□□□□□ -0.57
NPIPB4-217ENST00000543449 DBR1Q9UK59 544 aaKnown RBP11.46□□□□□ -0.57
NPIPB4-217ENST00000543449 TBKBP1A7MCY6 615 aa11.45□□□□□ -0.58
NPIPB4-217ENST00000543449 MGEA5O60502 916 aa11.45□□□□□ -0.58
NPIPB4-217ENST00000543449 DTNBO60941 627 aa11.45□□□□□ -0.58
NPIPB4-217ENST00000543449 BMP15O95972 392 aa11.45□□□□□ -0.58
NPIPB4-217ENST00000543449 PDCP20941 246 aa11.45□□□□□ -0.58
NPIPB4-217ENST00000543449 GJB2P29033 226 aa11.45□□□□□ -0.58
NPIPB4-217ENST00000543449 AXLP30530 894 aa11.45□□□□□ -0.58
NPIPB4-217ENST00000543449 PPM1AP35813 382 aa11.45□□□□□ -0.58
NPIPB4-217ENST00000543449 FXR2P51116 673 aaKnown RBP eCLIP11.45□□□□□ -0.58
NPIPB4-217ENST00000543449 PUS10Q3MIT2 529 aaKnown RBP11.45□□□□□ -0.58
NPIPB4-217ENST00000543449 MCTP1Q6DN14 999 aa11.45□□□□□ -0.58
NPIPB4-217ENST00000543449 PDE12Q6L8Q7 609 aaKnown RBP11.45□□□□□ -0.58
NPIPB4-217ENST00000543449 FERMT3Q86UX7 667 aa11.45□□□□□ -0.58
NPIPB4-217ENST00000543449 ECHDC2Q86YB7 292 aa11.45□□□□□ -0.58
NPIPB4-217ENST00000543449 LRRC43Q8N309 656 aa11.45□□□□□ -0.58
NPIPB4-217ENST00000543449 CNNM3Q8NE01 707 aa11.45□□□□□ -0.58
NPIPB4-217ENST00000543449 PGBD4Q96DM1 585 aa11.45□□□□□ -0.58
NPIPB4-217ENST00000543449 CCDC51Q96ER9 411 aa11.45□□□□□ -0.58
NPIPB4-217ENST00000543449 ASB2Q96Q27 587 aa11.45□□□□□ -0.58
NPIPB4-217ENST00000543449 NSUN3Q9H649 340 aaKnown RBP11.45□□□□□ -0.58
NPIPB4-217ENST00000543449 MYO9BQ13459 2157 aa11.45□□□□□ -0.58
NPIPB4-217ENST00000543449 EVPLQ92817 2033 aa11.45□□□□□ -0.58
NPIPB4-217ENST00000543449 RALGAPA2Q2PPJ7 1873 aa11.44□□□□□ -0.58
NPIPB4-217ENST00000543449 SZT2Q5T011 3432 aa11.44□□□□□ -0.58
NPIPB4-217ENST00000543449 TMEM150BA6NC51 233 aa11.44□□□□□ -0.58
NPIPB4-217ENST00000543449 POTEMA6NI47 508 aa11.44□□□□□ -0.58
NPIPB4-217ENST00000543449 ERLIN2O94905 339 aa11.44□□□□□ -0.58
NPIPB4-217ENST00000543449 TECP42680 631 aa11.44□□□□□ -0.58
NPIPB4-217ENST00000543449 RARRES1P49788 294 aa11.44□□□□□ -0.58
NPIPB4-217ENST00000543449 LAMTOR4Q0VGL1 99 aa11.44□□□□□ -0.58
NPIPB4-217ENST00000543449 DRP2Q13474 957 aa11.44□□□□□ -0.58
NPIPB4-217ENST00000543449 BMS1Q14692 1282 aaKnown RBP11.44□□□□□ -0.58
NPIPB4-217ENST00000543449 TWF2Q6IBS0 349 aaKnown RBP11.44□□□□□ -0.58
NPIPB4-217ENST00000543449 IFNLR1Q8IU57 520 aaPredicted RBP11.44□□□□□ -0.58
NPIPB4-217ENST00000543449 PRPF31Q8WWY3 499 aaKnown RBP11.44□□□□□ -0.58
NPIPB4-217ENST00000543449 NFKBIZQ9BYH8 718 aa11.44□□□□□ -0.58
NPIPB4-217ENST00000543449 BACH2Q9BYV9 841 aa11.44□□□□□ -0.58
NPIPB4-217ENST00000543449 TMEM60Q9H2L4 133 aa11.44□□□□□ -0.58
NPIPB4-217ENST00000543449 WRAP73Q9P2S5 460 aaPredicted RBP11.44□□□□□ -0.58
NPIPB4-217ENST00000543449 STK39Q9UEW8 545 aa11.44□□□□□ -0.58
NPIPB4-217ENST00000543449 LRWD1Q9UFC0 647 aa11.44□□□□□ -0.58
NPIPB4-217ENST00000543449 PUF60Q9UHX1 559 aaKnown RBP11.44□□□□□ -0.58
NPIPB4-217ENST00000543449 PIN4Q9Y237 131 aaKnown RBP11.44□□□□□ -0.58
NPIPB4-217ENST00000543449 FAM50BQ9Y247 325 aa11.44□□□□□ -0.58
NPIPB4-217ENST00000543449 MRPL42Q9Y6G3 142 aaKnown RBP11.44□□□□□ -0.58
NPIPB4-217ENST00000543449 WDR81Q562E7 1941 aa11.44□□□□□ -0.58
NPIPB4-217ENST00000543449 ARHGEF35A5YM69 484 aa11.43□□□□□ -0.58
NPIPB4-217ENST00000543449 ZNF623O75123 536 aa11.43□□□□□ -0.58
NPIPB4-217ENST00000543449 PPP2R5AQ15172 486 aa11.43□□□□□ -0.58
NPIPB4-217ENST00000543449 PAN2Q504Q3 1202 aaKnown RBP11.43□□□□□ -0.58
NPIPB4-217ENST00000543449 KRT79Q5XKE5 535 aa11.43□□□□□ -0.58
NPIPB4-217ENST00000543449 LARP1BQ659C4 914 aaKnown RBP11.43□□□□□ -0.58
NPIPB4-217ENST00000543449 DTHD1Q6ZMT9 781 aa11.43□□□□□ -0.58
NPIPB4-217ENST00000543449 BRAPQ7Z569 592 aa11.43□□□□□ -0.58
NPIPB4-217ENST00000543449 SPRED2Q7Z698 418 aa11.43□□□□□ -0.58
NPIPB4-217ENST00000543449 CATSPER3Q86XQ3 398 aa11.43□□□□□ -0.58
NPIPB4-217ENST00000543449 HACE1Q8IYU2 909 aa11.43□□□□□ -0.58
NPIPB4-217ENST00000543449 RNF149Q8NC42 400 aa11.43□□□□□ -0.58
NPIPB4-217ENST00000543449 TMEM143Q96AN5 459 aa11.43□□□□□ -0.58
NPIPB4-217ENST00000543449 SH2D3AQ9BRG2 576 aa11.43□□□□□ -0.58
NPIPB4-217ENST00000543449 C2orf40Q9H1Z8 148 aa11.43□□□□□ -0.58
NPIPB4-217ENST00000543449 IFT122Q9HBG6 1241 aa11.43□□□□□ -0.58
NPIPB4-217ENST00000543449 UBN1Q9NPG3 1134 aa11.43□□□□□ -0.58
NPIPB4-217ENST00000543449 AGPAT5Q9NUQ2 364 aa11.43□□□□□ -0.58
NPIPB4-217ENST00000543449 PLAGL2Q9UPG8 496 aa11.43□□□□□ -0.58
NPIPB4-217ENST00000543449 LZTS1Q9Y250 596 aa11.43□□□□□ -0.58
NPIPB4-217ENST00000543449 PHLPP2Q6ZVD8 1323 aa11.42□□□□□ -0.58
NPIPB4-217ENST00000543449 CNTNAP2Q9UHC6 1331 aa11.42□□□□□ -0.58
NPIPB4-217ENST00000543449 WNT7AO00755 349 aa11.42□□□□□ -0.58
NPIPB4-217ENST00000543449 SLC26A4O43511 780 aa11.42□□□□□ -0.58
NPIPB4-217ENST00000543449 LINC00271P0C7V0 271 aa11.42□□□□□ -0.58
NPIPB4-217ENST00000543449 SRGAP2CP0DJJ0 459 aa11.42□□□□□ -0.58
NPIPB4-217ENST00000543449 SPATA31C1P0DKV0 1188 aa11.42□□□□□ -0.58
NPIPB4-217ENST00000543449 PDIA4P13667 645 aaKnown RBP11.42□□□□□ -0.58
NPIPB4-217ENST00000543449 IBSPP21815 317 aaPredicted RBP11.42□□□□□ -0.58
NPIPB4-217ENST00000543449 CCT6AP40227 531 aaKnown RBP11.42□□□□□ -0.58
NPIPB4-217ENST00000543449 PTENP60484 403 aa11.42□□□□□ -0.58
NPIPB4-217ENST00000543449 KRT17Q04695 432 aa11.42□□□□□ -0.58
NPIPB4-217ENST00000543449 PTGDRQ13258 359 aa11.42□□□□□ -0.58
NPIPB4-217ENST00000543449 FAM102BQ5T8I3 360 aa11.42□□□□□ -0.58
NPIPB4-217ENST00000543449 ARL6IP4Q66PJ3 421 aaKnown RBP11.42□□□□□ -0.58
NPIPB4-217ENST00000543449 GLB1LQ6UWU2 654 aa11.42□□□□□ -0.58
NPIPB4-217ENST00000543449 ZNF598Q86UK7 904 aaKnown RBP11.42□□□□□ -0.58
NPIPB4-217ENST00000543449 ZBTB8OSQ8IWT0 167 aa11.42□□□□□ -0.58
NPIPB4-217ENST00000543449 THNSL1Q8IYQ7 743 aa11.42□□□□□ -0.58
NPIPB4-217ENST00000543449 ZNF668Q96K58 619 aaPredicted RBP11.42□□□□□ -0.58
NPIPB4-217ENST00000543449 ZNF558Q96NG5 402 aa11.42□□□□□ -0.58
NPIPB4-217ENST00000543449 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.42□□□□□ -0.58
NPIPB4-217ENST00000543449 FAM105AQ9NUU6 356 aa11.42□□□□□ -0.58
NPIPB4-217ENST00000543449 KANSL3Q9P2N6 904 aa11.42□□□□□ -0.58
NPIPB4-217ENST00000543449 KCNG1Q9UIX4 513 aa11.42□□□□□ -0.58
NPIPB4-217ENST00000543449 COL4A4P53420 1690 aaPredicted RBP11.41□□□□□ -0.58
NPIPB4-217ENST00000543449 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms