RNA–Protein interactions for RNA: ENST00000543264.6

SHD-201, Transcript of Src homology 2 domain containing transforming protein D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHD, Length 2,577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHD-201ENST00000543264 USP17L20D6RJB6 530 aa25.62■■□□□ 1.69
SHD-201ENST00000543264 IGF2BP3O00425 579 aaKnown RBP eCLIP25.62■■□□□ 1.69
SHD-201ENST00000543264 PLCG2P16885 1265 aa25.62■■□□□ 1.69
SHD-201ENST00000543264 PTGIRP43119 386 aa25.62■■□□□ 1.69
SHD-201ENST00000543264 USP17L24Q0WX57 530 aa25.62■■□□□ 1.69
SHD-201ENST00000543264 DRAP1Q14919 205 aaPredicted RBP25.62■■□□□ 1.69
SHD-201ENST00000543264 LRCH2Q5VUJ6 765 aa25.62■■□□□ 1.69
SHD-201ENST00000543264 USP17L6PQ6QN14 398 aa25.62■■□□□ 1.69
SHD-201ENST00000543264 CATSPER3Q86XQ3 398 aa25.62■■□□□ 1.69
SHD-201ENST00000543264 MTMR4Q9NYA4 1195 aa25.62■■□□□ 1.69
SHD-201ENST00000543264 TAS2R14Q9NYV8 317 aa25.62■■□□□ 1.69
SHD-201ENST00000543264 NOP53Q9NZM5 478 aaKnown RBP25.62■■□□□ 1.69
SHD-201ENST00000543264 MTRF1LQ9UGC7 380 aaKnown RBP25.62■■□□□ 1.69
SHD-201ENST00000543264 KIF13BQ9NQT8 1826 aa25.62■■□□□ 1.69
SHD-201ENST00000543264 DOT1LQ8TEK3 1739 aa25.61■■□□□ 1.69
SHD-201ENST00000543264 IRS2Q9Y4H2 1338 aa25.61■■□□□ 1.69
SHD-201ENST00000543264 RSPH10B2B2RC85 870 aa25.61■■□□□ 1.69
SHD-201ENST00000543264 DIAPH2O60879 1101 aa25.61■■□□□ 1.69
SHD-201ENST00000543264 RSPH10BP0C881 870 aa25.61■■□□□ 1.69
SHD-201ENST00000543264 RPL13P26373 211 aaKnown RBP25.61■■□□□ 1.69
SHD-201ENST00000543264 AUHQ13825 339 aaKnown RBP25.61■■□□□ 1.69
SHD-201ENST00000543264 BARGINQ6ZT62 677 aa25.61■■□□□ 1.69
SHD-201ENST00000543264 KIF2BQ8N4N8 673 aa25.61■■□□□ 1.69
SHD-201ENST00000543264 CDC25CP30307 473 aa25.61■■□□□ 1.69
SHD-201ENST00000543264 KCNQ4P56696 695 aa25.61■■□□□ 1.69
SHD-201ENST00000543264 EPM2AIP1Q7L775 607 aaPredicted RBP25.61■■□□□ 1.69
SHD-201ENST00000543264 ZNF622Q969S3 477 aaKnown RBP eCLIP25.61■■□□□ 1.69
SHD-201ENST00000543264 IKZF4Q9H2S9 585 aa25.61■■□□□ 1.69
SHD-201ENST00000543264 FGFR1OP2Q9NVK5 253 aa25.61■■□□□ 1.69
SHD-201ENST00000543264 DNAJC12Q9UKB3 198 aa25.61■■□□□ 1.69
SHD-201ENST00000543264 COG5Q9UP83 839 aa25.61■■□□□ 1.69
SHD-201ENST00000543264 STK38LQ9Y2H1 464 aa25.61■■□□□ 1.69
SHD-201ENST00000543264 USP15Q9Y4E8 981 aaPredicted RBP25.61■■□□□ 1.69
SHD-201ENST00000543264 ASTN1O14525 1302 aa25.61■■□□□ 1.69
SHD-201ENST00000543264 GCNT3O95395 438 aa25.6■■□□□ 1.69
SHD-201ENST00000543264 VCAM1P19320 739 aa25.6■■□□□ 1.69
SHD-201ENST00000543264 OTUD6AQ7L8S5 288 aa25.6■■□□□ 1.69
SHD-201ENST00000543264 CCDC25Q86WR0 208 aa25.6■■□□□ 1.69
SHD-201ENST00000543264 TYW1Q9NV66 732 aaKnown RBP25.6■■□□□ 1.69
SHD-201ENST00000543264 DDX60LQ5H9U9 1706 aaKnown RBP25.6■■□□□ 1.69
SHD-201ENST00000543264 A8MUI8 341 aa25.6■■□□□ 1.69
SHD-201ENST00000543264 TCP11X1B4DZS4 312 aa25.6■■□□□ 1.69
SHD-201ENST00000543264 RIPK2O43353 540 aa25.6■■□□□ 1.69
SHD-201ENST00000543264 NAIF1Q69YI7 327 aaPredicted RBP25.6■■□□□ 1.69
SHD-201ENST00000543264 BZW1Q7L1Q6 419 aaKnown RBP25.6■■□□□ 1.69
SHD-201ENST00000543264 TAOK1Q7L7X3 1001 aa25.6■■□□□ 1.69
SHD-201ENST00000543264 NBPF5PQ86XG9 351 aaPredicted RBP25.6■■□□□ 1.69
SHD-201ENST00000543264 KLHL29Q96CT2 875 aa25.6■■□□□ 1.69
SHD-201ENST00000543264 STMN4Q9H169 189 aaPredicted RBP25.6■■□□□ 1.69
SHD-201ENST00000543264 DNM3Q9UQ16 869 aa25.6■■□□□ 1.69
SHD-201ENST00000543264 ALG6Q9Y672 507 aa25.6■■□□□ 1.69
SHD-201ENST00000543264 PHF2O75151 1096 aa25.59■■□□□ 1.69
SHD-201ENST00000543264 TNFAIP3P21580 790 aa25.59■■□□□ 1.69
SHD-201ENST00000543264 CROCCP2Q86T23 111 aa25.59■■□□□ 1.69
SHD-201ENST00000543264 EXOC3L1Q86VI1 746 aa25.59■■□□□ 1.69
SHD-201ENST00000543264 PRELID2Q8N945 189 aa25.59■■□□□ 1.69
SHD-201ENST00000543264 TBC1D22AQ8WUA7 517 aa25.59■■□□□ 1.69
SHD-201ENST00000543264 BATF3Q9NR55 127 aa25.59■■□□□ 1.69
SHD-201ENST00000543264 TMEM110-MUSTN1A8MSY1 372 aa25.59■■□□□ 1.69
SHD-201ENST00000543264 NOVP48745 357 aa25.59■■□□□ 1.69
SHD-201ENST00000543264 MAP2K1Q02750 393 aaPredicted RBP25.59■■□□□ 1.69
SHD-201ENST00000543264 PPP1R18Q6NYC8 613 aa25.59■■□□□ 1.69
SHD-201ENST00000543264 PALB2Q86YC2 1186 aa25.59■■□□□ 1.69
SHD-201ENST00000543264 MXD3Q9BW11 206 aa25.59■■□□□ 1.69
SHD-201ENST00000543264 MLXIPLQ9NP71 852 aa25.59■■□□□ 1.69
SHD-201ENST00000543264 PPP1R12AO14974 1030 aaPredicted RBP25.58■■□□□ 1.69
SHD-201ENST00000543264 SATB1Q01826 763 aa25.58■■□□□ 1.69
SHD-201ENST00000543264 TTC27Q6P3X3 843 aa25.58■■□□□ 1.69
SHD-201ENST00000543264 SPICE1Q8N0Z3 855 aa25.58■■□□□ 1.69
SHD-201ENST00000543264 KRT35Q92764 455 aa25.58■■□□□ 1.69
SHD-201ENST00000543264 SPDL1Q96EA4 605 aa25.58■■□□□ 1.69
SHD-201ENST00000543264 STK33Q9BYT3 514 aa25.58■■□□□ 1.69
SHD-201ENST00000543264 SFI1A8K8P3 1242 aa25.58■■□□□ 1.69
SHD-201ENST00000543264 USP17L10C9JJH3 530 aa25.58■■□□□ 1.69
SHD-201ENST00000543264 KRT16P08779 473 aa25.58■■□□□ 1.69
SHD-201ENST00000543264 CHRNA3P32297 505 aa25.58■■□□□ 1.69
SHD-201ENST00000543264 BTNL9Q6UXG8 535 aa25.58■■□□□ 1.69
SHD-201ENST00000543264 ZNF570Q96NI8 536 aa25.58■■□□□ 1.69
SHD-201ENST00000543264 PTPN22Q9Y2R2 807 aa25.58■■□□□ 1.69
SHD-201ENST00000543264 HGSO14964 777 aaPredicted RBP25.57■■□□□ 1.68
SHD-201ENST00000543264 SLC16A3O15427 465 aaKnown RBP25.57■■□□□ 1.68
SHD-201ENST00000543264 ALADP13716 330 aa25.57■■□□□ 1.68
SHD-201ENST00000543264 MARCKSL1P49006 195 aa25.57■■□□□ 1.68
SHD-201ENST00000543264 ZNF543Q08ER8 600 aa25.57■■□□□ 1.68
SHD-201ENST00000543264 ARHGAP44Q17R89 818 aa25.57■■□□□ 1.68
SHD-201ENST00000543264 NUGGCQ68CJ6 796 aa25.57■■□□□ 1.68
SHD-201ENST00000543264 CCDC137Q6PK04 289 aaKnown RBP25.57■■□□□ 1.68
SHD-201ENST00000543264 SYT2Q8N9I0 419 aaPredicted RBP25.57■■□□□ 1.68
SHD-201ENST00000543264 HOMER3Q9NSC5 361 aa25.57■■□□□ 1.68
SHD-201ENST00000543264 SUN1O94901 812 aa25.57■■□□□ 1.68
SHD-201ENST00000543264 AKR1B1P15121 316 aa25.57■■□□□ 1.68
SHD-201ENST00000543264 CREB1P16220 341 aa25.57■■□□□ 1.68
SHD-201ENST00000543264 COPS2P61201 443 aa25.57■■□□□ 1.68
SHD-201ENST00000543264 LONRF1Q17RB8 773 aa25.57■■□□□ 1.68
SHD-201ENST00000543264 GALNTL6Q49A17 601 aa25.57■■□□□ 1.68
SHD-201ENST00000543264 ZDHHC14Q8IZN3 488 aa25.57■■□□□ 1.68
SHD-201ENST00000543264 TMEM109Q9BVC6 243 aa25.57■■□□□ 1.68
SHD-201ENST00000543264 PNMA3Q9UL41 463 aa25.57■■□□□ 1.68
SHD-201ENST00000543264 GTPBP10A4D1E9 387 aaKnown RBP25.56■■□□□ 1.68
SHD-201ENST00000543264 PODXLO00592 558 aa25.56■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms