RNA–Protein interactions for RNA: ENST00000541661.5

SCARB1-207, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 476 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-207ENST00000541661 CACNA1HO95180 2353 aa14.77□□□□□ -0.05
SCARB1-207ENST00000541661 GALR2O43603 387 aaPredicted RBP14.76□□□□□ -0.05
SCARB1-207ENST00000541661 GFRA3O60609 400 aa14.76□□□□□ -0.05
SCARB1-207ENST00000541661 BRD1O95696 1058 aa14.76□□□□□ -0.05
SCARB1-207ENST00000541661 FGFR4P22455 802 aa14.76□□□□□ -0.05
SCARB1-207ENST00000541661 SP100P23497 879 aaPredicted RBP14.76□□□□□ -0.05
SCARB1-207ENST00000541661 JAK3P52333 1124 aa14.76□□□□□ -0.05
SCARB1-207ENST00000541661 TBC1D8BQ0IIM8 1120 aa14.76□□□□□ -0.05
SCARB1-207ENST00000541661 NTRK3Q16288 839 aa14.76□□□□□ -0.05
SCARB1-207ENST00000541661 UGCGQ16739 394 aa14.76□□□□□ -0.05
SCARB1-207ENST00000541661 ZDHHC14Q8IZN3 488 aa14.76□□□□□ -0.05
SCARB1-207ENST00000541661 RDM1Q8NG50 284 aa14.76□□□□□ -0.05
SCARB1-207ENST00000541661 NLRP7Q8WX94 980 aa14.76□□□□□ -0.05
SCARB1-207ENST00000541661 TMEM169Q96HH4 297 aa14.76□□□□□ -0.05
SCARB1-207ENST00000541661 ZNF668Q96K58 619 aaPredicted RBP14.76□□□□□ -0.05
SCARB1-207ENST00000541661 SNX27Q96L92 541 aa14.76□□□□□ -0.05
SCARB1-207ENST00000541661 CEP89Q96ST8 783 aa14.76□□□□□ -0.05
SCARB1-207ENST00000541661 NIFKQ9BYG3 293 aaKnown RBP14.76□□□□□ -0.05
SCARB1-207ENST00000541661 ZBP1Q9H171 429 aa14.76□□□□□ -0.05
SCARB1-207ENST00000541661 TSHZ2Q9NRE2 1034 aa14.76□□□□□ -0.05
SCARB1-207ENST00000541661 DZANK1Q9NVP4 752 aa14.76□□□□□ -0.05
SCARB1-207ENST00000541661 NAP1L2Q9ULW6 460 aaPredicted RBP14.76□□□□□ -0.05
SCARB1-207ENST00000541661 IGKV6-21A0A0C4DH24 114 aa14.75□□□□□ -0.05
SCARB1-207ENST00000541661 NT5C1B-RDH14C9J2C7 533 aa14.75□□□□□ -0.05
SCARB1-207ENST00000541661 GAS7O60861 476 aa14.75□□□□□ -0.05
SCARB1-207ENST00000541661 PHKA2P46019 1235 aa14.75□□□□□ -0.05
SCARB1-207ENST00000541661 POLGP54098 1239 aaPredicted RBP14.75□□□□□ -0.05
SCARB1-207ENST00000541661 FGD1P98174 961 aa14.75□□□□□ -0.05
SCARB1-207ENST00000541661 GIT2Q14161 759 aa14.75□□□□□ -0.05
SCARB1-207ENST00000541661 KIAA1841Q6NSI8 718 aa14.75□□□□□ -0.05
SCARB1-207ENST00000541661 Q6ZUG5 572 aa14.75□□□□□ -0.05
SCARB1-207ENST00000541661 DDX53Q86TM3 631 aaKnown RBP14.75□□□□□ -0.05
SCARB1-207ENST00000541661 VPS52Q8N1B4 723 aa14.75□□□□□ -0.05
SCARB1-207ENST00000541661 CCDC148Q8NFR7 591 aa14.75□□□□□ -0.05
SCARB1-207ENST00000541661 CCDC136Q96JN2 1154 aa14.75□□□□□ -0.05
SCARB1-207ENST00000541661 RNF26Q9BY78 433 aaPredicted RBP14.75□□□□□ -0.05
SCARB1-207ENST00000541661 AGXT2Q9BYV1 514 aa14.75□□□□□ -0.05
SCARB1-207ENST00000541661 GCOM2Q9BZD3 368 aaPredicted RBP14.75□□□□□ -0.05
SCARB1-207ENST00000541661 UNC45AQ9H3U1 944 aa14.75□□□□□ -0.05
SCARB1-207ENST00000541661 USTQ9Y2C2 406 aa14.75□□□□□ -0.05
SCARB1-207ENST00000541661 ZFHX2Q9C0A1 2572 aaPredicted RBP14.75□□□□□ -0.05
SCARB1-207ENST00000541661 DENND4AQ7Z401 1863 aa14.74□□□□□ -0.05
SCARB1-207ENST00000541661 H0Y858 1186 aa14.74□□□□□ -0.05
SCARB1-207ENST00000541661 ZNF623O75123 536 aa14.74□□□□□ -0.05
SCARB1-207ENST00000541661 CSDE1O75534 798 aaKnown RBP14.74□□□□□ -0.05
SCARB1-207ENST00000541661 PSMD10O75832 226 aa14.74□□□□□ -0.05
SCARB1-207ENST00000541661 STBD1O95210 358 aa14.74□□□□□ -0.05
SCARB1-207ENST00000541661 CTSAP10619 480 aa14.74□□□□□ -0.05
SCARB1-207ENST00000541661 SKIP12755 728 aa14.74□□□□□ -0.05
SCARB1-207ENST00000541661 CPA1P15085 419 aa14.74□□□□□ -0.05
SCARB1-207ENST00000541661 DRP2Q13474 957 aa14.74□□□□□ -0.05
SCARB1-207ENST00000541661 XKR3Q5GH77 459 aa14.74□□□□□ -0.05
SCARB1-207ENST00000541661 ATAT1Q5SQI0 421 aa14.74□□□□□ -0.05
SCARB1-207ENST00000541661 LRCH2Q5VUJ6 765 aa14.74□□□□□ -0.05
SCARB1-207ENST00000541661 B3GNT9Q6UX72 402 aa14.74□□□□□ -0.05
SCARB1-207ENST00000541661 PLCD3Q8N3E9 789 aa14.74□□□□□ -0.05
SCARB1-207ENST00000541661 SLC22A17Q8WUG5 538 aa14.74□□□□□ -0.05
SCARB1-207ENST00000541661 BRF1Q92994 677 aa14.74□□□□□ -0.05
SCARB1-207ENST00000541661 PHKBQ93100 1093 aa14.74□□□□□ -0.05
SCARB1-207ENST00000541661 IGSF21Q96ID5 467 aa14.74□□□□□ -0.05
SCARB1-207ENST00000541661 SCLT1Q96NL6 688 aa14.74□□□□□ -0.05
SCARB1-207ENST00000541661 TEKT3Q9BXF9 490 aa14.74□□□□□ -0.05
SCARB1-207ENST00000541661 INO80BQ9C086 356 aaPredicted RBP14.74□□□□□ -0.05
SCARB1-207ENST00000541661 CYP3A7-CYP3A51PA0A087WV96 503 aa14.73□□□□□ -0.05
SCARB1-207ENST00000541661 IFNAR1P17181 557 aa14.73□□□□□ -0.05
SCARB1-207ENST00000541661 SFPQP23246 707 aaKnown RBP eCLIP14.73□□□□□ -0.052e-6■■□□□ 12.9
SCARB1-207ENST00000541661 CYP3A7P24462 503 aa14.73□□□□□ -0.05
SCARB1-207ENST00000541661 DNM2P50570 870 aa14.73□□□□□ -0.05
SCARB1-207ENST00000541661 AKAP17AQ02040 695 aaKnown RBP14.73□□□□□ -0.05
SCARB1-207ENST00000541661 Q4G0T1 1027 aa14.73□□□□□ -0.05
SCARB1-207ENST00000541661 RARS2Q5T160 578 aaKnown RBP14.73□□□□□ -0.05
SCARB1-207ENST00000541661 ZNF410Q86VK4 478 aa14.73□□□□□ -0.05
SCARB1-207ENST00000541661 TMEM173Q86WV6 379 aaPredicted RBP14.73□□□□□ -0.05
SCARB1-207ENST00000541661 C12orf76Q8N812 135 aaPredicted RBP14.73□□□□□ -0.05
SCARB1-207ENST00000541661 TMEM105Q8N8V8 129 aa14.73□□□□□ -0.05
SCARB1-207ENST00000541661 NRDE2Q9H7Z3 1164 aa14.73□□□□□ -0.05
SCARB1-207ENST00000541661 SH3GLB2Q9NR46 395 aa14.73□□□□□ -0.05
SCARB1-207ENST00000541661 A0A087WZ62 844 aa14.72□□□□□ -0.05
SCARB1-207ENST00000541661 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.72□□□□□ -0.05
SCARB1-207ENST00000541661 CHMP2AO43633 222 aa14.72□□□□□ -0.05
SCARB1-207ENST00000541661 ZC3H11AO75152 810 aaKnown RBP eCLIP14.72□□□□□ -0.05
SCARB1-207ENST00000541661 MAFO75444 373 aaPredicted RBP14.72□□□□□ -0.05
SCARB1-207ENST00000541661 OFD1O75665 1012 aa14.72□□□□□ -0.05
SCARB1-207ENST00000541661 GALTP07902 379 aa14.72□□□□□ -0.05
SCARB1-207ENST00000541661 WEE2P0C1S8 567 aa14.72□□□□□ -0.05
SCARB1-207ENST00000541661 EPCAMP16422 314 aa14.72□□□□□ -0.05
SCARB1-207ENST00000541661 MTERF2Q49AM1 385 aa14.72□□□□□ -0.05
SCARB1-207ENST00000541661 NOMO2Q5JPE7 1267 aa14.72□□□□□ -0.05
SCARB1-207ENST00000541661 GLB1LQ6UWU2 654 aa14.72□□□□□ -0.05
SCARB1-207ENST00000541661 MIER3Q7Z3K6 550 aa14.72□□□□□ -0.05
SCARB1-207ENST00000541661 TDRD5Q8NAT2 981 aaKnown RBP14.72□□□□□ -0.05
SCARB1-207ENST00000541661 AUTS2Q8WXX7 1259 aa14.72□□□□□ -0.05
SCARB1-207ENST00000541661 FDXACB1Q9BRP7 624 aaPredicted RBP14.72□□□□□ -0.05
SCARB1-207ENST00000541661 C22orf23Q9BZE7 217 aa14.72□□□□□ -0.05
SCARB1-207ENST00000541661 SMOC2Q9H3U7 446 aa14.72□□□□□ -0.05
SCARB1-207ENST00000541661 TBC1D13Q9NVG8 400 aa14.72□□□□□ -0.05
SCARB1-207ENST00000541661 VPS54Q9P1Q0 977 aa14.72□□□□□ -0.05
SCARB1-207ENST00000541661 LIMD1Q9UGP4 676 aa14.72□□□□□ -0.05
SCARB1-207ENST00000541661 CDC45O75419 566 aa14.71□□□□□ -0.05
SCARB1-207ENST00000541661 ASGR2P07307 311 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms