RNA–Protein interactions for RNA: ENST00000541242.1

AC005840.4-201, humanhuman

BASIC

Gene AC005840.4, Length 2,494 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.4-201ENST00000541242 GNAQP50148 359 aa16.06■□□□□ 0.16
AC005840.4-201ENST00000541242 COPS2P61201 443 aa16.06■□□□□ 0.16
AC005840.4-201ENST00000541242 DPY19L2P1Q6NXN4 242 aa16.06■□□□□ 0.16
AC005840.4-201ENST00000541242 USP17L2Q6R6M4 530 aa16.06■□□□□ 0.16
AC005840.4-201ENST00000541242 NEDD1Q8NHV4 660 aa16.06■□□□□ 0.16
AC005840.4-201ENST00000541242 DYDC1Q8WWB3 177 aa16.06■□□□□ 0.16
AC005840.4-201ENST00000541242 CNKSR1Q969H4 720 aa16.06■□□□□ 0.16
AC005840.4-201ENST00000541242 MXD3Q9BW11 206 aa16.06■□□□□ 0.16
AC005840.4-201ENST00000541242 RAB17Q9H0T7 212 aa16.06■□□□□ 0.16
AC005840.4-201ENST00000541242 DAGLAQ9Y4D2 1042 aa16.06■□□□□ 0.16
AC005840.4-201ENST00000541242 USP15Q9Y4E8 981 aaPredicted RBP16.06■□□□□ 0.16
AC005840.4-201ENST00000541242 LTBP1Q14766 1721 aa16.06■□□□□ 0.16
AC005840.4-201ENST00000541242 H2AFZP0C0S5 128 aa16.05■□□□□ 0.16
AC005840.4-201ENST00000541242 ATP2A2P16615 1042 aaKnown RBP16.05■□□□□ 0.16
AC005840.4-201ENST00000541242 MKRN4PQ13434 485 aaPredicted RBP16.05■□□□□ 0.16
AC005840.4-201ENST00000541242 BLMHQ13867 455 aa16.05■□□□□ 0.16
AC005840.4-201ENST00000541242 GALNTL6Q49A17 601 aa16.05■□□□□ 0.16
AC005840.4-201ENST00000541242 H2AFVQ71UI9 128 aa16.05■□□□□ 0.16
AC005840.4-201ENST00000541242 FITM2Q8N6M3 262 aa16.05■□□□□ 0.16
AC005840.4-201ENST00000541242 CEP95Q96GE4 821 aa16.05■□□□□ 0.16
AC005840.4-201ENST00000541242 ZHX3Q9H4I2 956 aa16.05■□□□□ 0.16
AC005840.4-201ENST00000541242 AMFRQ9UKV5 643 aa16.05■□□□□ 0.16
AC005840.4-201ENST00000541242 CORO1CQ9ULV4 474 aaPredicted RBP16.05■□□□□ 0.16
AC005840.4-201ENST00000541242 DDX3XO00571 662 aaKnown RBP eCLIP16.05■□□□□ 0.16
AC005840.4-201ENST00000541242 PPEF1O14829 653 aaPredicted RBP16.05■□□□□ 0.16
AC005840.4-201ENST00000541242 EDIL3O43854 480 aa16.05■□□□□ 0.16
AC005840.4-201ENST00000541242 OAS1P00973 400 aaKnown RBP16.05■□□□□ 0.16
AC005840.4-201ENST00000541242 KRT13P13646 458 aa16.05■□□□□ 0.16
AC005840.4-201ENST00000541242 ABCB4P21439 1286 aa16.05■□□□□ 0.16
AC005840.4-201ENST00000541242 PTENP60484 403 aa16.05■□□□□ 0.16
AC005840.4-201ENST00000541242 BNIP1Q12981 228 aa16.05■□□□□ 0.16
AC005840.4-201ENST00000541242 PSMD2Q13200 908 aa16.05■□□□□ 0.16
AC005840.4-201ENST00000541242 TAF11Q15544 211 aa16.05■□□□□ 0.16
AC005840.4-201ENST00000541242 NUGGCQ68CJ6 796 aa16.05■□□□□ 0.16
AC005840.4-201ENST00000541242 SAMD1Q6SPF0 538 aaPredicted RBP16.05■□□□□ 0.16
AC005840.4-201ENST00000541242 C18orf8Q96DM3 657 aa16.05■□□□□ 0.16
AC005840.4-201ENST00000541242 OSBPL1AQ9BXW6 950 aa16.05■□□□□ 0.16
AC005840.4-201ENST00000541242 NSRP1Q9H0G5 558 aaKnown RBP16.05■□□□□ 0.16
AC005840.4-201ENST00000541242 C6orf50Q9HD87 102 aa16.05■□□□□ 0.16
AC005840.4-201ENST00000541242 NKX1-2Q9UD57 310 aaPredicted RBP16.05■□□□□ 0.16
AC005840.4-201ENST00000541242 HDAC9Q9UKV0 1011 aa16.05■□□□□ 0.16
AC005840.4-201ENST00000541242 IGSF9BQ9UPX0 1349 aa16.05■□□□□ 0.16
AC005840.4-201ENST00000541242 E9PMD0 336 aa16.04■□□□□ 0.16
AC005840.4-201ENST00000541242 MAP3K13O43283 966 aa16.04■□□□□ 0.16
AC005840.4-201ENST00000541242 NT5C2P49902 561 aa16.04■□□□□ 0.16
AC005840.4-201ENST00000541242 GALCP54803 685 aa16.04■□□□□ 0.16
AC005840.4-201ENST00000541242 RNASELQ05823 741 aaKnown RBP16.04■□□□□ 0.16
AC005840.4-201ENST00000541242 ADCY2Q08462 1091 aa16.04■□□□□ 0.16
AC005840.4-201ENST00000541242 C10orf76Q5T2E6 689 aa16.04■□□□□ 0.16
AC005840.4-201ENST00000541242 SOGA3Q5TF21 947 aa16.04■□□□□ 0.16
AC005840.4-201ENST00000541242 KRT79Q5XKE5 535 aa16.04■□□□□ 0.16
AC005840.4-201ENST00000541242 JAMLQ86YT9 394 aa16.04■□□□□ 0.16
AC005840.4-201ENST00000541242 CERS5Q8N5B7 392 aa16.04■□□□□ 0.16
AC005840.4-201ENST00000541242 GDAP1Q8TB36 358 aa16.04■□□□□ 0.16
AC005840.4-201ENST00000541242 SCFD1Q8WVM8 642 aa16.04■□□□□ 0.16
AC005840.4-201ENST00000541242 RMDN2Q96LZ7 410 aa16.04■□□□□ 0.16
AC005840.4-201ENST00000541242 TMOD4Q9NZQ9 345 aa16.04■□□□□ 0.16
AC005840.4-201ENST00000541242 ANKRD31Q8N7Z5 1873 aa16.04■□□□□ 0.16
AC005840.4-201ENST00000541242 KIAA0391O15091 583 aaKnown RBP16.04■□□□□ 0.16
AC005840.4-201ENST00000541242 DDX3YO15523 660 aaKnown RBP16.04■□□□□ 0.16
AC005840.4-201ENST00000541242 FLOT1O75955 427 aa16.04■□□□□ 0.16
AC005840.4-201ENST00000541242 PLCG2P16885 1265 aa16.04■□□□□ 0.16
AC005840.4-201ENST00000541242 PON1P27169 355 aa16.04■□□□□ 0.16
AC005840.4-201ENST00000541242 PDE6CP51160 858 aa16.04■□□□□ 0.16
AC005840.4-201ENST00000541242 ICA1Q05084 483 aa16.04■□□□□ 0.16
AC005840.4-201ENST00000541242 AUHQ13825 339 aaKnown RBP16.04■□□□□ 0.16
AC005840.4-201ENST00000541242 NBPF20Q3BBV1 942 aa16.04■□□□□ 0.16
AC005840.4-201ENST00000541242 DCAF17Q5H9S7 520 aaPredicted RBP16.04■□□□□ 0.16
AC005840.4-201ENST00000541242 KIAA1755Q5JYT7 1200 aa16.04■□□□□ 0.16
AC005840.4-201ENST00000541242 EXOC3L1Q86VI1 746 aa16.04■□□□□ 0.16
AC005840.4-201ENST00000541242 SP8Q8IXZ3 490 aa16.04■□□□□ 0.16
AC005840.4-201ENST00000541242 CEP63Q96MT8 703 aa16.04■□□□□ 0.16
AC005840.4-201ENST00000541242 PIGSQ96S52 555 aa16.04■□□□□ 0.16
AC005840.4-201ENST00000541242 ARHGEF3Q9NR81 526 aa16.04■□□□□ 0.16
AC005840.4-201ENST00000541242 ZMYND8Q9ULU4 1186 aaPredicted RBP16.04■□□□□ 0.16
AC005840.4-201ENST00000541242 IRF6O14896 467 aa16.03■□□□□ 0.16
AC005840.4-201ENST00000541242 AGTP01019 485 aa16.03■□□□□ 0.16
AC005840.4-201ENST00000541242 RPL21P46778 160 aaKnown RBP16.03■□□□□ 0.16
AC005840.4-201ENST00000541242 PICALMQ13492 652 aa16.03■□□□□ 0.16
AC005840.4-201ENST00000541242 LONRF1Q17RB8 773 aa16.03■□□□□ 0.16
AC005840.4-201ENST00000541242 TMEM266Q2M3C6 531 aa16.03■□□□□ 0.16
AC005840.4-201ENST00000541242 REXO1Q8N1G1 1221 aaKnown RBP16.03■□□□□ 0.16
AC005840.4-201ENST00000541242 ANKRD42Q8N9B4 389 aa16.03■□□□□ 0.16
AC005840.4-201ENST00000541242 SLC35G2Q8TBE7 412 aa16.03■□□□□ 0.16
AC005840.4-201ENST00000541242 UBA5Q9GZZ9 404 aa16.03■□□□□ 0.16
AC005840.4-201ENST00000541242 KCTD10Q9H3F6 313 aa16.03■□□□□ 0.16
AC005840.4-201ENST00000541242 CCDC134Q9H6E4 229 aa16.03■□□□□ 0.16
AC005840.4-201ENST00000541242 GRHL1Q9NZI5 618 aa16.03■□□□□ 0.16
AC005840.4-201ENST00000541242 GOLGB1Q14789 3259 aaKnown RBP16.03■□□□□ 0.16
AC005840.4-201ENST00000541242 LRRC37AA6NMS7 1700 aa16.03■□□□□ 0.16
AC005840.4-201ENST00000541242 KLHL33A6NCF5 533 aa16.03■□□□□ 0.16
AC005840.4-201ENST00000541242 GFPT2O94808 682 aa16.03■□□□□ 0.16
AC005840.4-201ENST00000541242 NR2F2P24468 414 aa16.03■□□□□ 0.16
AC005840.4-201ENST00000541242 TUBP50607 506 aa16.03■□□□□ 0.16
AC005840.4-201ENST00000541242 FXR2P51116 673 aaKnown RBP eCLIP16.03■□□□□ 0.16
AC005840.4-201ENST00000541242 HERC4Q5GLZ8 1057 aaPredicted RBP16.03■□□□□ 0.16
AC005840.4-201ENST00000541242 C6orf118Q5T5N4 469 aa16.03■□□□□ 0.16
AC005840.4-201ENST00000541242 CCDC25Q86WR0 208 aa16.03■□□□□ 0.16
AC005840.4-201ENST00000541242 ZNF287Q9HBT7 754 aa16.03■□□□□ 0.16
AC005840.4-201ENST00000541242 DDX4Q9NQI0 724 aaKnown RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms