RNA–Protein interactions for RNA: ENST00000540357.5

DNMT1-203, Transcript of DNA methyltransferase 1, humanhuman

TSL 5 BASIC

Gene DNMT1, Length 4,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-203ENST00000540357 PROCA1Q8NCQ7 364 aaPredicted RBP13.97□□□□□ -0.17
DNMT1-203ENST00000540357 CEP95Q96GE4 821 aa13.97□□□□□ -0.17
DNMT1-203ENST00000540357 CENPUQ71F23 418 aa13.96□□□□□ -0.17
DNMT1-203ENST00000540357 ZNF564Q8TBZ8 553 aaPredicted RBP13.96□□□□□ -0.17
DNMT1-203ENST00000540357 CCDC127Q96BQ5 260 aa13.96□□□□□ -0.17
DNMT1-203ENST00000540357 TRIM55Q9BYV6 548 aa13.96□□□□□ -0.17
DNMT1-203ENST00000540357 MLXIPLQ9NP71 852 aa13.96□□□□□ -0.17
DNMT1-203ENST00000540357 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.96□□□□□ -0.17
DNMT1-203ENST00000540357 MAD2L2Q9UI95 211 aa13.96□□□□□ -0.17
DNMT1-203ENST00000540357 PPP1R12AO14974 1030 aaPredicted RBP13.96□□□□□ -0.17
DNMT1-203ENST00000540357 SETSIPP0DME0 302 aa13.96□□□□□ -0.17
DNMT1-203ENST00000540357 TNNI1P19237 187 aa13.96□□□□□ -0.17
DNMT1-203ENST00000540357 CCDC14Q49A88 953 aa13.96□□□□□ -0.17
DNMT1-203ENST00000540357 BTNL9Q6UXG8 535 aa13.96□□□□□ -0.17
DNMT1-203ENST00000540357 SDCCAG8Q86SQ7 713 aaPredicted RBP13.96□□□□□ -0.17
DNMT1-203ENST00000540357 AGPAT1Q99943 283 aa13.96□□□□□ -0.17
DNMT1-203ENST00000540357 CENPKQ9BS16 269 aa13.96□□□□□ -0.17
DNMT1-203ENST00000540357 DDX23Q9BUQ8 820 aaKnown RBP13.96□□□□□ -0.17
DNMT1-203ENST00000540357 SLAIN2Q9P270 581 aa13.96□□□□□ -0.17
DNMT1-203ENST00000540357 SEL1LQ9UBV2 794 aa13.96□□□□□ -0.17
DNMT1-203ENST00000540357 SERPINB13Q9UIV8 391 aa13.96□□□□□ -0.17
DNMT1-203ENST00000540357 H0Y3Z8 333 aa13.96□□□□□ -0.17
DNMT1-203ENST00000540357 HSPA1LP34931 641 aa13.96□□□□□ -0.17
DNMT1-203ENST00000540357 GTF2IP78347 998 aa13.96□□□□□ -0.17
DNMT1-203ENST00000540357 HADHQ16836 314 aaKnown RBP13.96□□□□□ -0.17
DNMT1-203ENST00000540357 CERKLQ49MI3 558 aaPredicted RBP13.96□□□□□ -0.17
DNMT1-203ENST00000540357 LRRC23Q53EV4 343 aaPredicted RBP13.96□□□□□ -0.17
DNMT1-203ENST00000540357 KAZNQ674X7 775 aa13.96□□□□□ -0.17
DNMT1-203ENST00000540357 CYFIP1Q7L576 1253 aa13.96□□□□□ -0.17
DNMT1-203ENST00000540357 CTAGE3PQ8IX95 158 aa13.96□□□□□ -0.17
DNMT1-203ENST00000540357 SLC44A5Q8NCS7 719 aa13.96□□□□□ -0.17
DNMT1-203ENST00000540357 KANSL2Q9H9L4 492 aa13.96□□□□□ -0.17
DNMT1-203ENST00000540357 FGFR1OP2Q9NVK5 253 aa13.96□□□□□ -0.17
DNMT1-203ENST00000540357 DNAJC17Q9NVM6 304 aaKnown RBP13.96□□□□□ -0.17
DNMT1-203ENST00000540357 MRPL11Q9Y3B7 192 aaKnown RBP13.96□□□□□ -0.17
DNMT1-203ENST00000540357 F8VZ95 297 aa13.96□□□□□ -0.18
DNMT1-203ENST00000540357 GYG2O15488 501 aa13.96□□□□□ -0.18
DNMT1-203ENST00000540357 ANP32DO95626 131 aa13.96□□□□□ -0.18
DNMT1-203ENST00000540357 INHBAP08476 426 aa13.96□□□□□ -0.18
DNMT1-203ENST00000540357 PDHA1P08559 390 aa13.96□□□□□ -0.18
DNMT1-203ENST00000540357 ITIH2P19823 946 aa13.96□□□□□ -0.18
DNMT1-203ENST00000540357 SCP2P22307 547 aa13.96□□□□□ -0.18
DNMT1-203ENST00000540357 HNRNPH3P31942 346 aaKnown RBP13.96□□□□□ -0.18
DNMT1-203ENST00000540357 CDR2Q01850 454 aa13.96□□□□□ -0.18
DNMT1-203ENST00000540357 SLC29A2Q14542 456 aa13.96□□□□□ -0.18
DNMT1-203ENST00000540357 HSP90AA5PQ58FG0 334 aa13.96□□□□□ -0.18
DNMT1-203ENST00000540357 ATP2A3Q93084 1043 aa13.96□□□□□ -0.18
DNMT1-203ENST00000540357 TEKT1Q969V4 418 aa13.96□□□□□ -0.18
DNMT1-203ENST00000540357 RCCD1A6NED2 376 aa13.95□□□□□ -0.18
DNMT1-203ENST00000540357 IPO5O00410 1097 aaKnown RBP13.95□□□□□ -0.18
DNMT1-203ENST00000540357 ZWINTO95229 277 aa13.95□□□□□ -0.18
DNMT1-203ENST00000540357 SLC9A1P19634 815 aa13.95□□□□□ -0.18
DNMT1-203ENST00000540357 ICA1Q05084 483 aa13.95□□□□□ -0.18
DNMT1-203ENST00000540357 FAM102BQ5T8I3 360 aa13.95□□□□□ -0.18
DNMT1-203ENST00000540357 ARHGAP18Q8N392 663 aa13.95□□□□□ -0.18
DNMT1-203ENST00000540357 SYT2Q8N9I0 419 aaPredicted RBP13.95□□□□□ -0.18
DNMT1-203ENST00000540357 ANKRD27Q96NW4 1050 aa13.95□□□□□ -0.18
DNMT1-203ENST00000540357 NUP85Q9BW27 656 aa13.95□□□□□ -0.18
DNMT1-203ENST00000540357 SENP1Q9P0U3 644 aa13.95□□□□□ -0.18
DNMT1-203ENST00000540357 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.95□□□□□ -0.18
DNMT1-203ENST00000540357 POTEFA5A3E0 1075 aa13.95□□□□□ -0.18
DNMT1-203ENST00000540357 O00370 1275 aa13.95□□□□□ -0.18
DNMT1-203ENST00000540357 POTEIP0CG38 1075 aa13.95□□□□□ -0.18
DNMT1-203ENST00000540357 NKX1-1Q15270 411 aaPredicted RBP13.95□□□□□ -0.18
DNMT1-203ENST00000540357 POTEGQ6S5H5 508 aa13.95□□□□□ -0.18
DNMT1-203ENST00000540357 POTEEQ6S8J3 1075 aa13.95□□□□□ -0.18
DNMT1-203ENST00000540357 ZC3H18Q86VM9 953 aaKnown RBP13.95□□□□□ -0.18
DNMT1-203ENST00000540357 SAYSD1Q9NPB0 183 aa13.95□□□□□ -0.18
DNMT1-203ENST00000540357 DBR1Q9UK59 544 aaKnown RBP13.95□□□□□ -0.18
DNMT1-203ENST00000540357 MEGF6O75095 1541 aa13.95□□□□□ -0.18
DNMT1-203ENST00000540357 FMN2Q9NZ56 1722 aa13.95□□□□□ -0.18
DNMT1-203ENST00000540357 ZSCAN5CA6NGD5 496 aaPredicted RBP13.95□□□□□ -0.18
DNMT1-203ENST00000540357 SGK1O00141 431 aa13.95□□□□□ -0.18
DNMT1-203ENST00000540357 MT-ND3P03897 115 aa13.95□□□□□ -0.18
DNMT1-203ENST00000540357 ERVK-9P63128 1117 aa13.95□□□□□ -0.18
DNMT1-203ENST00000540357 CHURC1Q8WUH1 139 aa13.95□□□□□ -0.18
DNMT1-203ENST00000540357 RIOK1Q9BRS2 568 aaKnown RBP13.95□□□□□ -0.18
DNMT1-203ENST00000540357 GGT7Q9UJ14 662 aa13.95□□□□□ -0.18
DNMT1-203ENST00000540357 PPP1R9AQ9ULJ8 1098 aa13.95□□□□□ -0.18
DNMT1-203ENST00000540357 SIK3Q9Y2K2 1263 aa13.95□□□□□ -0.18
DNMT1-203ENST00000540357 USH1CQ9Y6N9 552 aa13.95□□□□□ -0.18
DNMT1-203ENST00000540357 RICTORQ6R327 1708 aa13.95□□□□□ -0.18
DNMT1-203ENST00000540357 TMEM120BA0PK00 339 aa13.95□□□□□ -0.18
DNMT1-203ENST00000540357 H0YCG3 227 aa13.95□□□□□ -0.18
DNMT1-203ENST00000540357 MRPS35P82673 323 aaKnown RBP13.95□□□□□ -0.18
DNMT1-203ENST00000540357 KRT17Q04695 432 aa13.95□□□□□ -0.18
DNMT1-203ENST00000540357 PPP4R1Q8TF05 950 aa13.95□□□□□ -0.18
DNMT1-203ENST00000540357 PCIF1Q9H4Z3 704 aa13.95□□□□□ -0.18
DNMT1-203ENST00000540357 AIPL1Q9NZN9 384 aa13.95□□□□□ -0.18
DNMT1-203ENST00000540357 RTN2O75298 545 aa13.94□□□□□ -0.18
DNMT1-203ENST00000540357 CDH16O75309 829 aa13.94□□□□□ -0.18
DNMT1-203ENST00000540357 RCSD1Q6JBY9 416 aa13.94□□□□□ -0.18
DNMT1-203ENST00000540357 SLC30A9Q6PML9 568 aa13.94□□□□□ -0.18
DNMT1-203ENST00000540357 KIAA0895Q8NCT3 520 aa13.94□□□□□ -0.18
DNMT1-203ENST00000540357 C1orf131Q8NDD1 294 aaKnown RBP13.94□□□□□ -0.18
DNMT1-203ENST00000540357 CENPTQ96BT3 561 aa13.94□□□□□ -0.18
DNMT1-203ENST00000540357 SERPINB12Q96P63 405 aa13.94□□□□□ -0.18
DNMT1-203ENST00000540357 PACSIN1Q9BY11 444 aa13.94□□□□□ -0.18
DNMT1-203ENST00000540357 A1CFQ9NQ94 594 aaKnown RBP13.94□□□□□ -0.18
DNMT1-203ENST00000540357 TMOD4Q9NZQ9 345 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms