RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 ANKRD40Q6AI12 368 aa15.58■□□□□ 0.08
CACNB1-206ENST00000539338 ZNF746Q6NUN9 644 aaPredicted RBP15.58■□□□□ 0.08
CACNB1-206ENST00000539338 PDCD7Q8N8D1 485 aaKnown RBP15.58■□□□□ 0.08
CACNB1-206ENST00000539338 MMP19Q99542 508 aa15.58■□□□□ 0.08
CACNB1-206ENST00000539338 CCDC68Q9H2F9 335 aa15.58■□□□□ 0.08
CACNB1-206ENST00000539338 IFT122Q9HBG6 1241 aa15.58■□□□□ 0.08
CACNB1-206ENST00000539338 FAM50BQ9Y247 325 aa15.58■□□□□ 0.08
CACNB1-206ENST00000539338 DPYSL4O14531 572 aa15.58■□□□□ 0.08
CACNB1-206ENST00000539338 SLC16A4O15374 487 aa15.58■□□□□ 0.08
CACNB1-206ENST00000539338 PRPSAP1Q14558 356 aa15.58■□□□□ 0.08
CACNB1-206ENST00000539338 RBBP5Q15291 538 aaKnown RBP15.58■□□□□ 0.08
CACNB1-206ENST00000539338 PPP1R2P3Q6NXS1 205 aa15.58■□□□□ 0.08
CACNB1-206ENST00000539338 XXYLT1Q8NBI6 393 aa15.58■□□□□ 0.08
CACNB1-206ENST00000539338 CCHCR1Q8TD31 782 aa15.58■□□□□ 0.08
CACNB1-206ENST00000539338 HDAC11Q96DB2 347 aa15.58■□□□□ 0.08
CACNB1-206ENST00000539338 MXD3Q9BW11 206 aa15.58■□□□□ 0.08
CACNB1-206ENST00000539338 TOM1L1O75674 476 aa15.58■□□□□ 0.08
CACNB1-206ENST00000539338 MMEP08473 750 aa15.58■□□□□ 0.08
CACNB1-206ENST00000539338 TMCO4Q5TGY1 634 aa15.58■□□□□ 0.08
CACNB1-206ENST00000539338 ERICH1Q86X53 443 aa15.58■□□□□ 0.08
CACNB1-206ENST00000539338 IGDCC4Q8TDY8 1250 aa15.58■□□□□ 0.08
CACNB1-206ENST00000539338 PPP2R3BQ9Y5P8 575 aa15.58■□□□□ 0.08
CACNB1-206ENST00000539338 ORC4O43929 436 aa15.57■□□□□ 0.08
CACNB1-206ENST00000539338 ARL4AP40617 200 aa15.57■□□□□ 0.08
CACNB1-206ENST00000539338 STRIP1Q5VSL9 837 aa15.57■□□□□ 0.08
CACNB1-206ENST00000539338 THNSL1Q8IYQ7 743 aa15.57■□□□□ 0.08
CACNB1-206ENST00000539338 GUF1Q8N442 669 aaKnown RBP15.57■□□□□ 0.08
CACNB1-206ENST00000539338 PYROXD1Q8WU10 500 aa15.57■□□□□ 0.08
CACNB1-206ENST00000539338 HSPH1Q92598 858 aa15.57■□□□□ 0.08
CACNB1-206ENST00000539338 ADAM22Q9P0K1 906 aa15.57■□□□□ 0.08
CACNB1-206ENST00000539338 TMEM88BA6NKF7 163 aa15.57■□□□□ 0.08
CACNB1-206ENST00000539338 VPS33BQ9H267 617 aa15.57■□□□□ 0.08
CACNB1-206ENST00000539338 SAYSD1Q9NPB0 183 aa15.57■□□□□ 0.08
CACNB1-206ENST00000539338 PODXLO00592 558 aa15.57■□□□□ 0.08
CACNB1-206ENST00000539338 GPC5P78333 572 aa15.57■□□□□ 0.08
CACNB1-206ENST00000539338 E2F4Q16254 413 aa15.57■□□□□ 0.08
CACNB1-206ENST00000539338 TBC1D1Q86TI0 1168 aaPredicted RBP15.57■□□□□ 0.08
CACNB1-206ENST00000539338 TECPR2O15040 1411 aa15.57■□□□□ 0.08
CACNB1-206ENST00000539338 SYNGAP1Q96PV0 1343 aa15.57■□□□□ 0.08
CACNB1-206ENST00000539338 MYO1CO00159 1063 aa15.57■□□□□ 0.08
CACNB1-206ENST00000539338 RSBN1LQ6PCB5 846 aaPredicted RBP15.57■□□□□ 0.08
CACNB1-206ENST00000539338 SMIM5Q71RC9 77 aa15.57■□□□□ 0.08
CACNB1-206ENST00000539338 CHP1Q99653 195 aa15.57■□□□□ 0.08
CACNB1-206ENST00000539338 SENP2Q9HC62 589 aa15.57■□□□□ 0.08
CACNB1-206ENST00000539338 RAVER2Q9HCJ3 691 aaKnown RBP15.57■□□□□ 0.08
CACNB1-206ENST00000539338 TRIM17Q9Y577 477 aa15.57■□□□□ 0.08
CACNB1-206ENST00000539338 RARBP10826 455 aa15.56■□□□□ 0.08
CACNB1-206ENST00000539338 MAP7Q14244 749 aa15.56■□□□□ 0.08
CACNB1-206ENST00000539338 DRAP1Q14919 205 aaPredicted RBP15.56■□□□□ 0.08
CACNB1-206ENST00000539338 RCSD1Q6JBY9 416 aa15.56■□□□□ 0.08
CACNB1-206ENST00000539338 PRR5LQ6MZQ0 368 aa15.56■□□□□ 0.08
CACNB1-206ENST00000539338 RSRC2Q7L4I2 434 aaKnown RBP15.56■□□□□ 0.08
CACNB1-206ENST00000539338 GBP7Q8N8V2 638 aaPredicted RBP15.56■□□□□ 0.08
CACNB1-206ENST00000539338 FAM20AQ96MK3 541 aa15.56■□□□□ 0.08
CACNB1-206ENST00000539338 RMDN3Q96TC7 470 aa15.56■□□□□ 0.08
CACNB1-206ENST00000539338 ACTR5Q9H9F9 607 aaPredicted RBP15.56■□□□□ 0.08
CACNB1-206ENST00000539338 PSMA2P25787 234 aa15.56■□□□□ 0.08
CACNB1-206ENST00000539338 TRIM28Q13263 835 aaKnown RBP15.56■□□□□ 0.08
CACNB1-206ENST00000539338 JADE1Q6IE81 842 aa15.56■□□□□ 0.08
CACNB1-206ENST00000539338 C4orf50Q6ZRC1 276 aa15.56■□□□□ 0.08
CACNB1-206ENST00000539338 CENPUQ71F23 418 aa15.56■□□□□ 0.08
CACNB1-206ENST00000539338 TRIM42Q8IWZ5 723 aa15.56■□□□□ 0.08
CACNB1-206ENST00000539338 DIP2AQ14689 1571 aa15.56■□□□□ 0.08
CACNB1-206ENST00000539338 MIF4GDA9UHW6 222 aaKnown RBP15.56■□□□□ 0.08
CACNB1-206ENST00000539338 ANTXR2P58335 489 aa15.56■□□□□ 0.08
CACNB1-206ENST00000539338 MAGOHP61326 146 aaKnown RBP15.56■□□□□ 0.08
CACNB1-206ENST00000539338 PPP1R18Q6NYC8 613 aa15.56■□□□□ 0.08
CACNB1-206ENST00000539338 USP49Q70CQ1 688 aa15.56■□□□□ 0.08
CACNB1-206ENST00000539338 METTL23Q86XA0 190 aa15.56■□□□□ 0.08
CACNB1-206ENST00000539338 PDIK1LQ8N165 341 aa15.56■□□□□ 0.08
CACNB1-206ENST00000539338 GIMAP8Q8ND71 665 aaPredicted RBP15.56■□□□□ 0.08
CACNB1-206ENST00000539338 MYCBPQ99417 103 aaPredicted RBP15.56■□□□□ 0.08
CACNB1-206ENST00000539338 A0A1W2PQC6 194 aa15.56■□□□□ 0.08
CACNB1-206ENST00000539338 AKR1B1P15121 316 aa15.56■□□□□ 0.08
CACNB1-206ENST00000539338 CTCFP49711 727 aaPredicted RBP15.56■□□□□ 0.08
CACNB1-206ENST00000539338 GPSM2P81274 684 aa15.56■□□□□ 0.08
CACNB1-206ENST00000539338 RPF1Q9H9Y2 349 aaKnown RBP15.56■□□□□ 0.08
CACNB1-206ENST00000539338 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.56■□□□□ 0.08
CACNB1-206ENST00000539338 TPX2Q9ULW0 747 aaKnown RBP15.56■□□□□ 0.08
CACNB1-206ENST00000539338 CAPN11Q9UMQ6 739 aa15.56■□□□□ 0.08
CACNB1-206ENST00000539338 C19orf81C9J6K1 198 aa15.55■□□□□ 0.08
CACNB1-206ENST00000539338 LUC7L3O95232 432 aaKnown RBP15.55■□□□□ 0.08
CACNB1-206ENST00000539338 GUCY2CP25092 1073 aa15.55■□□□□ 0.08
CACNB1-206ENST00000539338 ABCD1P33897 745 aa15.55■□□□□ 0.08
CACNB1-206ENST00000539338 RGS2P41220 211 aa15.55■□□□□ 0.08
CACNB1-206ENST00000539338 RASIP1Q5U651 963 aa15.55■□□□□ 0.08
CACNB1-206ENST00000539338 FAM213AQ9BRX8 229 aa15.55■□□□□ 0.08
CACNB1-206ENST00000539338 G3BP2Q9UN86 482 aaKnown RBP15.55■□□□□ 0.08
CACNB1-206ENST00000539338 DIS3Q9Y2L1 958 aaKnown RBP15.55■□□□□ 0.08
CACNB1-206ENST00000539338 FIS1Q9Y3D6 152 aa15.55■□□□□ 0.08
CACNB1-206ENST00000539338 SCINQ9Y6U3 715 aa15.55■□□□□ 0.08
CACNB1-206ENST00000539338 TADA3O75528 432 aa15.55■□□□□ 0.08
CACNB1-206ENST00000539338 TRIM49P0CI25 452 aa15.55■□□□□ 0.08
CACNB1-206ENST00000539338 TRIM49CP0CI26 452 aa15.55■□□□□ 0.08
CACNB1-206ENST00000539338 ZNF18P17022 549 aa15.55■□□□□ 0.08
CACNB1-206ENST00000539338 VSNL1P62760 191 aa15.55■□□□□ 0.08
CACNB1-206ENST00000539338 TXLNGQ9NUQ3 528 aa15.55■□□□□ 0.08
CACNB1-206ENST00000539338 TYW5A2RUC4 315 aaKnown RBP15.55■□□□□ 0.08
CACNB1-206ENST00000539338 F5H6K3 240 aa15.55■□□□□ 0.08
CACNB1-206ENST00000539338 FKTNO75072 461 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms