RNA–Protein interactions for RNA: ENST00000539204.5

YBX3-207, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 649 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-207ENST00000539204 ZNF302Q9NR11 478 aa13.7□□□□□ -0.22
YBX3-207ENST00000539204 DACT1Q9NYF0 836 aa13.7□□□□□ -0.22
YBX3-207ENST00000539204 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.7□□□□□ -0.22
YBX3-207ENST00000539204 RALYQ9UKM9 306 aaKnown RBP13.7□□□□□ -0.22
YBX3-207ENST00000539204 USP24Q9UPU5 2620 aa13.7□□□□□ -0.22
YBX3-207ENST00000539204 LRRN2O75325 713 aa13.69□□□□□ -0.22
YBX3-207ENST00000539204 C22orf31O95567 290 aa13.69□□□□□ -0.22
YBX3-207ENST00000539204 CNPP09543 421 aaKnown RBP13.69□□□□□ -0.22
YBX3-207ENST00000539204 LAMP2P13473 410 aa13.69□□□□□ -0.22
YBX3-207ENST00000539204 KIF5BP33176 963 aa13.69□□□□□ -0.22
YBX3-207ENST00000539204 COL9A3Q14050 684 aaPredicted RBP13.69□□□□□ -0.22
YBX3-207ENST00000539204 UBE2SQ16763 222 aa13.69□□□□□ -0.22
YBX3-207ENST00000539204 PPM1JQ5JR12 505 aa13.69□□□□□ -0.22
YBX3-207ENST00000539204 SWSAP1Q6NVH7 229 aa13.69□□□□□ -0.22
YBX3-207ENST00000539204 ELMSAN1Q6PJG2 1045 aa13.69□□□□□ -0.22
YBX3-207ENST00000539204 CKAP2LQ8IYA6 745 aa13.69□□□□□ -0.22
YBX3-207ENST00000539204 MYADMQ96S97 322 aa13.69□□□□□ -0.22
YBX3-207ENST00000539204 LZTS2Q9BRK4 669 aa13.69□□□□□ -0.22
YBX3-207ENST00000539204 SPZ1Q9BXG8 430 aa13.69□□□□□ -0.22
YBX3-207ENST00000539204 ADAMTS10Q9H324 1103 aa13.69□□□□□ -0.22
YBX3-207ENST00000539204 SENP2Q9HC62 589 aa13.69□□□□□ -0.22
YBX3-207ENST00000539204 SLC2A4RGQ9NR83 387 aa13.69□□□□□ -0.22
YBX3-207ENST00000539204 DIAPH3Q9NSV4 1193 aa13.69□□□□□ -0.22
YBX3-207ENST00000539204 AKT3Q9Y243 479 aa13.69□□□□□ -0.22
YBX3-207ENST00000539204 KANSL1LA0AUZ9 987 aa13.68□□□□□ -0.22
YBX3-207ENST00000539204 MAGEB2O15479 319 aa13.68□□□□□ -0.22
YBX3-207ENST00000539204 TBC1D4O60343 1298 aa13.68□□□□□ -0.22
YBX3-207ENST00000539204 SSBP05455 408 aaKnown RBP eCLIP13.68□□□□□ -0.22
YBX3-207ENST00000539204 TGM1P22735 817 aa13.68□□□□□ -0.22
YBX3-207ENST00000539204 TMOD1P28289 359 aa13.68□□□□□ -0.22
YBX3-207ENST00000539204 RNASELQ05823 741 aaKnown RBP13.68□□□□□ -0.22
YBX3-207ENST00000539204 ITGB3BPQ13352 177 aaPredicted RBP13.68□□□□□ -0.22
YBX3-207ENST00000539204 SART3Q15020 963 aaKnown RBP13.68□□□□□ -0.22
YBX3-207ENST00000539204 CEP55Q53EZ4 464 aa13.68□□□□□ -0.22
YBX3-207ENST00000539204 TRMT1LQ7Z2T5 733 aaKnown RBP13.68□□□□□ -0.22
YBX3-207ENST00000539204 ZBTB44Q8NCP5 570 aa13.68□□□□□ -0.22
YBX3-207ENST00000539204 CTCFLQ8NI51 663 aaPredicted RBP13.68□□□□□ -0.22
YBX3-207ENST00000539204 BBXQ8WY36 941 aaPredicted RBP13.68□□□□□ -0.22
YBX3-207ENST00000539204 MAP7D2Q96T17 732 aa13.68□□□□□ -0.22
YBX3-207ENST00000539204 RHOBTB2Q9BYZ6 727 aa13.68□□□□□ -0.22
YBX3-207ENST00000539204 EPC1Q9H2F5 836 aa13.68□□□□□ -0.22
YBX3-207ENST00000539204 NRDE2Q9H7Z3 1164 aa13.68□□□□□ -0.22
YBX3-207ENST00000539204 AGO4Q9HCK5 861 aaKnown RBP13.68□□□□□ -0.22
YBX3-207ENST00000539204 MAN1C1Q9NR34 630 aa13.68□□□□□ -0.22
YBX3-207ENST00000539204 MRPL17Q9NRX2 175 aaKnown RBP13.68□□□□□ -0.22
YBX3-207ENST00000539204 ZSCAN32Q9NX65 697 aa13.68□□□□□ -0.22
YBX3-207ENST00000539204 SMG5Q9UPR3 1016 aaKnown RBP13.68□□□□□ -0.22
YBX3-207ENST00000539204 EVPLQ92817 2033 aa13.68□□□□□ -0.22
YBX3-207ENST00000539204 DENND4AQ7Z401 1863 aa13.67□□□□□ -0.22
YBX3-207ENST00000539204 CLUHO75153 1309 aa13.67□□□□□ -0.22
YBX3-207ENST00000539204 DDX39AO00148 427 aaKnown RBP13.67□□□□□ -0.22
YBX3-207ENST00000539204 LILRB3O75022 631 aa13.67□□□□□ -0.22
YBX3-207ENST00000539204 ATP4AP20648 1035 aa13.67□□□□□ -0.22
YBX3-207ENST00000539204 SNW1Q13573 536 aaKnown RBP13.67□□□□□ -0.22
YBX3-207ENST00000539204 EFCAB12Q6NXP0 572 aa13.67□□□□□ -0.22
YBX3-207ENST00000539204 MIS18BP1Q6P0N0 1132 aa13.67□□□□□ -0.22
YBX3-207ENST00000539204 CCDC60Q8IWA6 550 aaPredicted RBP13.67□□□□□ -0.22
YBX3-207ENST00000539204 BCL7CQ8WUZ0 217 aaPredicted RBP13.67□□□□□ -0.22
YBX3-207ENST00000539204 MAP3K14Q99558 947 aa13.67□□□□□ -0.22
YBX3-207ENST00000539204 PIDD1Q9HB75 910 aa13.67□□□□□ -0.22
YBX3-207ENST00000539204 CHST12Q9NRB3 414 aa13.67□□□□□ -0.22
YBX3-207ENST00000539204 GMEB2Q9UKD1 530 aa13.67□□□□□ -0.22
YBX3-207ENST00000539204 CEP131Q9UPN4 1083 aa13.67□□□□□ -0.22
YBX3-207ENST00000539204 FAM170BA6NMN3 283 aa13.66□□□□□ -0.22
YBX3-207ENST00000539204 ANHXE9PGG2 379 aa13.66□□□□□ -0.22
YBX3-207ENST00000539204 HIP1O00291 1037 aa13.66□□□□□ -0.22
YBX3-207ENST00000539204 INPPL1O15357 1258 aa13.66□□□□□ -0.22
YBX3-207ENST00000539204 CCNE2O96020 404 aa13.66□□□□□ -0.22
YBX3-207ENST00000539204 ALDH2P05091 517 aa13.66□□□□□ -0.22
YBX3-207ENST00000539204 SKIP12755 728 aa13.66□□□□□ -0.22
YBX3-207ENST00000539204 CLCN3P51790 818 aa13.66□□□□□ -0.22
YBX3-207ENST00000539204 DMWDQ09019 674 aa13.66□□□□□ -0.22
YBX3-207ENST00000539204 NOMO2Q5JPE7 1267 aa13.66□□□□□ -0.22
YBX3-207ENST00000539204 GLB1LQ6UWU2 654 aa13.66□□□□□ -0.22
YBX3-207ENST00000539204 SMG7Q92540 1137 aaKnown RBP13.66□□□□□ -0.22
YBX3-207ENST00000539204 VN1R3Q9BXE9 311 aa13.66□□□□□ -0.22
YBX3-207ENST00000539204 OSBPL6Q9BZF3 934 aa13.66□□□□□ -0.22
YBX3-207ENST00000539204 GBP3Q9H0R5 595 aa13.66□□□□□ -0.22
YBX3-207ENST00000539204 SH2B1Q9NRF2 756 aaPredicted RBP13.66□□□□□ -0.22
YBX3-207ENST00000539204 TBC1D13Q9NVG8 400 aa13.66□□□□□ -0.22
YBX3-207ENST00000539204 SSX2IPQ9Y2D8 614 aa13.66□□□□□ -0.22
YBX3-207ENST00000539204 NUMBLQ9Y6R0 609 aa13.66□□□□□ -0.22
YBX3-207ENST00000539204 MEIS1O00470 390 aa13.65□□□□□ -0.22
YBX3-207ENST00000539204 SLC30A4O14863 429 aa13.65□□□□□ -0.22
YBX3-207ENST00000539204 LILRB5O75023 590 aa13.65□□□□□ -0.22
YBX3-207ENST00000539204 ADH1AP07327 375 aa13.65□□□□□ -0.22
YBX3-207ENST00000539204 MYBP10242 640 aa13.65□□□□□ -0.22
YBX3-207ENST00000539204 DARSP14868 501 aaKnown RBP13.65□□□□□ -0.22
YBX3-207ENST00000539204 FGFR4P22455 802 aa13.65□□□□□ -0.22
YBX3-207ENST00000539204 MAGEA9P43362 315 aa13.65□□□□□ -0.22
YBX3-207ENST00000539204 PHKA2P46019 1235 aa13.65□□□□□ -0.22
YBX3-207ENST00000539204 SLC11A1P49279 550 aa13.65□□□□□ -0.22
YBX3-207ENST00000539204 GNAQP50148 359 aa13.65□□□□□ -0.22
YBX3-207ENST00000539204 GPC5P78333 572 aa13.65□□□□□ -0.22
YBX3-207ENST00000539204 PRKCQQ04759 706 aa13.65□□□□□ -0.22
YBX3-207ENST00000539204 UBXN2BQ14CS0 331 aa13.65□□□□□ -0.22
YBX3-207ENST00000539204 LONRF3Q496Y0 759 aa13.65□□□□□ -0.22
YBX3-207ENST00000539204 SLC44A4Q53GD3 710 aa13.65□□□□□ -0.22
YBX3-207ENST00000539204 RALYLQ86SE5 291 aaKnown RBP13.65□□□□□ -0.22
YBX3-207ENST00000539204 NETO1Q8TDF5 533 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms