RNA–Protein interactions for RNA: ENST00000538909.1

CBX3P4-201, Transcript of chromobox 3 pseudogene 4, humanhuman

BASIC

Gene CBX3P4, Length 354 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-201ENST00000538909 GJA8P48165 433 aa3.04□□□□□ -1.92
CBX3P4-201ENST00000538909 ZNF81P51508 661 aa3.04□□□□□ -1.92
CBX3P4-201ENST00000538909 MAP3K12Q12852 859 aa3.04□□□□□ -1.92
CBX3P4-201ENST00000538909 FOXF2Q12947 444 aa3.04□□□□□ -1.92
CBX3P4-201ENST00000538909 SEC23AQ15436 765 aa3.04□□□□□ -1.92
CBX3P4-201ENST00000538909 STYK1Q6J9G0 422 aa3.04□□□□□ -1.92
CBX3P4-201ENST00000538909 EEPD1Q7L9B9 569 aa3.04□□□□□ -1.92
CBX3P4-201ENST00000538909 SRRM1Q8IYB3 904 aaKnown RBP3.04□□□□□ -1.92
CBX3P4-201ENST00000538909 ST8SIA2Q92186 375 aa3.04□□□□□ -1.92
CBX3P4-201ENST00000538909 SEC16BQ96JE7 1060 aa3.04□□□□□ -1.92
CBX3P4-201ENST00000538909 SAE1Q9UBE0 346 aaPredicted RBP3.04□□□□□ -1.92
CBX3P4-201ENST00000538909 DENND2AQ9ULE3 1009 aa3.04□□□□□ -1.92
CBX3P4-201ENST00000538909 CBLCQ9ULV8 474 aa3.04□□□□□ -1.92
CBX3P4-201ENST00000538909 TRAF6Q9Y4K3 522 aa3.04□□□□□ -1.92
CBX3P4-201ENST00000538909 EPN1Q9Y6I3 576 aaPredicted RBP3.04□□□□□ -1.92
CBX3P4-201ENST00000538909 COL3A1P02461 1466 aaPredicted RBP3.03□□□□□ -1.92
CBX3P4-201ENST00000538909 AHRRA9YTQ3 701 aa3.03□□□□□ -1.92
CBX3P4-201ENST00000538909 TRIM24O15164 1050 aa3.03□□□□□ -1.92
CBX3P4-201ENST00000538909 STC2O76061 302 aa3.03□□□□□ -1.92
CBX3P4-201ENST00000538909 PYGMP11217 842 aa3.03□□□□□ -1.92
CBX3P4-201ENST00000538909 HOXB6P17509 224 aaKnown RBP3.03□□□□□ -1.92
CBX3P4-201ENST00000538909 APEX1P27695 318 aaKnown RBP3.03□□□□□ -1.92
CBX3P4-201ENST00000538909 SEC24CP53992 1094 aa3.03□□□□□ -1.92
CBX3P4-201ENST00000538909 SESN2P58004 480 aaPredicted RBP3.03□□□□□ -1.92
CBX3P4-201ENST00000538909 FOXI1Q12951 378 aa3.03□□□□□ -1.92
CBX3P4-201ENST00000538909 PAK1Q13153 545 aa3.03□□□□□ -1.92
CBX3P4-201ENST00000538909 FAM214AQ32MH5 1076 aa3.03□□□□□ -1.92
CBX3P4-201ENST00000538909 KRTAP5-1Q6L8H4 278 aa3.03□□□□□ -1.92
CBX3P4-201ENST00000538909 ASB15Q8WXK1 588 aa3.03□□□□□ -1.92
CBX3P4-201ENST00000538909 OSBP2Q969R2 916 aa3.03□□□□□ -1.92
CBX3P4-201ENST00000538909 GFM2Q969S9 779 aaKnown RBP3.03□□□□□ -1.92
CBX3P4-201ENST00000538909 FBXW5Q969U6 566 aa3.03□□□□□ -1.92
CBX3P4-201ENST00000538909 MYEOVQ96EZ4 313 aa3.03□□□□□ -1.92
CBX3P4-201ENST00000538909 ZNF778Q96MU6 729 aa3.03□□□□□ -1.92
CBX3P4-201ENST00000538909 GBP4Q96PP9 640 aa3.03□□□□□ -1.92
CBX3P4-201ENST00000538909 SYBUQ9NX95 663 aa3.03□□□□□ -1.92
CBX3P4-201ENST00000538909 STRIP2Q9ULQ0 834 aa3.03□□□□□ -1.92
CBX3P4-201ENST00000538909 EPB41L3Q9Y2J2 1087 aaPredicted RBP3.03□□□□□ -1.92
CBX3P4-201ENST00000538909 POLA1P09884 1462 aaPredicted RBP3.03□□□□□ -1.93
CBX3P4-201ENST00000538909 TTBK1Q5TCY1 1321 aaPredicted RBP3.02□□□□□ -1.93
CBX3P4-201ENST00000538909 ABCA5Q8WWZ7 1642 aa3.02□□□□□ -1.93
CBX3P4-201ENST00000538909 SCDO00767 359 aa3.02□□□□□ -1.93
CBX3P4-201ENST00000538909 TOX4O94842 621 aa3.02□□□□□ -1.93
CBX3P4-201ENST00000538909 NDUFA10O95299 355 aa3.02□□□□□ -1.93
CBX3P4-201ENST00000538909 GJB6O95452 261 aa3.02□□□□□ -1.93
CBX3P4-201ENST00000538909 SRGAP2CP0DJJ0 459 aa3.02□□□□□ -1.93
CBX3P4-201ENST00000538909 PABPC1P11940 636 aaKnown RBP3.02□□□□□ -1.93
CBX3P4-201ENST00000538909 HSP90AA2PQ14568 343 aaPredicted RBP3.02□□□□□ -1.93
CBX3P4-201ENST00000538909 FXNQ16595 210 aa3.02□□□□□ -1.93
CBX3P4-201ENST00000538909 NAIF1Q69YI7 327 aaPredicted RBP3.02□□□□□ -1.93
CBX3P4-201ENST00000538909 NSMFQ6X4W1 530 aa3.02□□□□□ -1.93
CBX3P4-201ENST00000538909 MTDHQ86UE4 582 aaKnown RBP3.02□□□□□ -1.93
CBX3P4-201ENST00000538909 Q8N9P0 234 aaPredicted RBP3.02□□□□□ -1.93
CBX3P4-201ENST00000538909 ZNF384Q8TF68 577 aa3.02□□□□□ -1.93
CBX3P4-201ENST00000538909 ERCC4Q92889 916 aaPredicted RBP3.02□□□□□ -1.93
CBX3P4-201ENST00000538909 AARSD1Q9BTE6 412 aaKnown RBP3.02□□□□□ -1.93
CBX3P4-201ENST00000538909 KRTAP2-2Q9BYT5 123 aa3.02□□□□□ -1.93
CBX3P4-201ENST00000538909 KCNH6Q9H252 994 aa3.02□□□□□ -1.93
CBX3P4-201ENST00000538909 TLK1Q9UKI8 766 aa3.02□□□□□ -1.93
CBX3P4-201ENST00000538909 ABCC8Q09428 1581 aa3.02□□□□□ -1.93
CBX3P4-201ENST00000538909 UNC119BA6NIH7 251 aa3.01□□□□□ -1.93
CBX3P4-201ENST00000538909 FOXP2O15409 715 aa3.01□□□□□ -1.93
CBX3P4-201ENST00000538909 CLASP2O75122 1294 aaKnown RBP3.01□□□□□ -1.93
CBX3P4-201ENST00000538909 RBMXL2O75526 392 aaKnown RBP3.01□□□□□ -1.93
CBX3P4-201ENST00000538909 NCR1O76036 304 aa3.01□□□□□ -1.93
CBX3P4-201ENST00000538909 MATN4O95460 622 aa3.01□□□□□ -1.93
CBX3P4-201ENST00000538909 IGLV2-14P01704 120 aa3.01□□□□□ -1.93
CBX3P4-201ENST00000538909 VSIG10L2P0DP72 767 aa3.01□□□□□ -1.93
CBX3P4-201ENST00000538909 HKR1P10072 659 aa3.01□□□□□ -1.93
CBX3P4-201ENST00000538909 ZNF16P17020 682 aaPredicted RBP3.01□□□□□ -1.93
CBX3P4-201ENST00000538909 APOBEC3AP31941 199 aaPredicted RBP3.01□□□□□ -1.93
CBX3P4-201ENST00000538909 DNM2P50570 870 aa3.01□□□□□ -1.93
CBX3P4-201ENST00000538909 ANTXR2P58335 489 aa3.01□□□□□ -1.93
CBX3P4-201ENST00000538909 IFRD2Q12894 506 aaPredicted RBP3.01□□□□□ -1.93
CBX3P4-201ENST00000538909 GAGE13Q4V321 117 aa3.01□□□□□ -1.93
CBX3P4-201ENST00000538909 TM4SF20Q53R12 229 aa3.01□□□□□ -1.93
CBX3P4-201ENST00000538909 DCAF17Q5H9S7 520 aaPredicted RBP3.01□□□□□ -1.93
CBX3P4-201ENST00000538909 MAMDC2Q7Z304 686 aaPredicted RBP3.01□□□□□ -1.93
CBX3P4-201ENST00000538909 ARHGEF19Q8IW93 802 aa3.01□□□□□ -1.93
CBX3P4-201ENST00000538909 CALML6Q8TD86 181 aa3.01□□□□□ -1.93
CBX3P4-201ENST00000538909 LINC00476Q8WZB0 136 aa3.01□□□□□ -1.93
CBX3P4-201ENST00000538909 SLC46A2Q9BY10 475 aa3.01□□□□□ -1.93
CBX3P4-201ENST00000538909 EPN3Q9H201 632 aa3.01□□□□□ -1.93
CBX3P4-201ENST00000538909 SMURF1Q9HCE7 757 aa3.01□□□□□ -1.93
CBX3P4-201ENST00000538909 KIAA1586Q9HCI6 787 aa3.01□□□□□ -1.93
CBX3P4-201ENST00000538909 TRPM5Q9NZQ8 1165 aa3.01□□□□□ -1.93
CBX3P4-201ENST00000538909 ABCA10Q8WWZ4 1543 aa3.01□□□□□ -1.93
CBX3P4-201ENST00000538909 EIF4G3O43432 1585 aaKnown RBP3□□□□□ -1.93
CBX3P4-201ENST00000538909 COL11A2P13942 1736 aaPredicted RBP3□□□□□ -1.93
CBX3P4-201ENST00000538909 RASSF10A6NK89 507 aa3□□□□□ -1.93
CBX3P4-201ENST00000538909 TMEM200CA6NKL6 621 aa3□□□□□ -1.93
CBX3P4-201ENST00000538909 ZNF561-AS1K7EIQ3 104 aa3□□□□□ -1.93
CBX3P4-201ENST00000538909 NPEPPSP55786 919 aa3□□□□□ -1.93
CBX3P4-201ENST00000538909 SPIDRQ14159 915 aa3□□□□□ -1.93
CBX3P4-201ENST00000538909 CRY1Q16526 586 aa3□□□□□ -1.93
CBX3P4-201ENST00000538909 TNNI3KQ59H18 835 aa3□□□□□ -1.93
CBX3P4-201ENST00000538909 YOD1Q5VVQ6 348 aaPredicted RBP3□□□□□ -1.93
CBX3P4-201ENST00000538909 KRTAP5-4Q6L8H1 288 aa3□□□□□ -1.93
CBX3P4-201ENST00000538909 FSTL4Q6MZW2 842 aa3□□□□□ -1.93
CBX3P4-201ENST00000538909 ARHGEF25Q86VW2 580 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms