RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 AADACL2Q6P093 401 aa9.46□□□□□ -0.89
UBE3B-208ENST00000538070 OR2W6PQ8NHA6 318 aa9.46□□□□□ -0.89
UBE3B-208ENST00000538070 SLC5A5Q92911 643 aa9.46□□□□□ -0.89
UBE3B-208ENST00000538070 BTBD6Q96KE9 485 aa9.46□□□□□ -0.89
UBE3B-208ENST00000538070 MBOAT7Q96N66 472 aa9.46□□□□□ -0.89
UBE3B-208ENST00000538070 PI4K2AQ9BTU6 479 aa9.46□□□□□ -0.89
UBE3B-208ENST00000538070 DEFB129Q9H1M3 183 aa9.46□□□□□ -0.89
UBE3B-208ENST00000538070 TUFT1Q9NNX1 390 aa9.46□□□□□ -0.89
UBE3B-208ENST00000538070 PIM2Q9P1W9 311 aa9.46□□□□□ -0.89
UBE3B-208ENST00000538070 AMACRQ9UHK6 382 aa9.46□□□□□ -0.89
UBE3B-208ENST00000538070 RAD51CO43502 376 aa9.46□□□□□ -0.9
UBE3B-208ENST00000538070 GMPSP49915 693 aaPredicted RBP9.46□□□□□ -0.9
UBE3B-208ENST00000538070 ODF2Q5BJF6 829 aa9.46□□□□□ -0.9
UBE3B-208ENST00000538070 WDR93Q6P2C0 686 aa9.46□□□□□ -0.9
UBE3B-208ENST00000538070 HAUS6Q7Z4H7 955 aa9.46□□□□□ -0.9
UBE3B-208ENST00000538070 NLRX1Q86UT6 975 aa9.46□□□□□ -0.9
UBE3B-208ENST00000538070 RANBP17Q9H2T7 1088 aaKnown RBP9.46□□□□□ -0.9
UBE3B-208ENST00000538070 PICK1Q9NRD5 415 aa9.46□□□□□ -0.9
UBE3B-208ENST00000538070 RNF146Q9NTX7 359 aa9.46□□□□□ -0.9
UBE3B-208ENST00000538070 GABBR1Q9UBS5 961 aa9.46□□□□□ -0.9
UBE3B-208ENST00000538070 QARSP47897 775 aaKnown RBP9.45□□□□□ -0.9
UBE3B-208ENST00000538070 TUBB4BP68371 445 aa9.45□□□□□ -0.9
UBE3B-208ENST00000538070 CETN1Q12798 172 aa9.45□□□□□ -0.9
UBE3B-208ENST00000538070 MTERF2Q49AM1 385 aa9.45□□□□□ -0.9
UBE3B-208ENST00000538070 SWSAP1Q6NVH7 229 aa9.45□□□□□ -0.9
UBE3B-208ENST00000538070 CBWD2Q8IUF1 395 aa9.45□□□□□ -0.9
UBE3B-208ENST00000538070 IFT20Q8IY31 132 aa9.45□□□□□ -0.9
UBE3B-208ENST00000538070 C10orf67Q8IYJ2 551 aa9.45□□□□□ -0.9
UBE3B-208ENST00000538070 FAM76AQ8TAV0 307 aa9.45□□□□□ -0.9
UBE3B-208ENST00000538070 FAM71BQ8TC56 605 aa9.45□□□□□ -0.9
UBE3B-208ENST00000538070 SYTL5Q8TDW5 730 aaPredicted RBP9.45□□□□□ -0.9
UBE3B-208ENST00000538070 UBLCP1Q8WVY7 318 aaPredicted RBP9.45□□□□□ -0.9
UBE3B-208ENST00000538070 SEPT9Q9UHD8 586 aaPredicted RBP9.45□□□□□ -0.9
UBE3B-208ENST00000538070 CNOT7Q9UIV1 285 aaKnown RBP9.45□□□□□ -0.9
UBE3B-208ENST00000538070 HACL1Q9UJ83 578 aa9.45□□□□□ -0.9
UBE3B-208ENST00000538070 KIF4AO95239 1232 aa9.45□□□□□ -0.9
UBE3B-208ENST00000538070 FGGP02679 453 aa9.45□□□□□ -0.9
UBE3B-208ENST00000538070 P4HBP07237 508 aaKnown RBP9.45□□□□□ -0.9
UBE3B-208ENST00000538070 VCAM1P19320 739 aa9.45□□□□□ -0.9
UBE3B-208ENST00000538070 MRPS9P82933 396 aaKnown RBP9.45□□□□□ -0.9
UBE3B-208ENST00000538070 DALRD3Q5D0E6 543 aaKnown RBP9.45□□□□□ -0.9
UBE3B-208ENST00000538070 MCTP2Q6DN12 878 aa9.45□□□□□ -0.9
UBE3B-208ENST00000538070 SLC30A5Q8TAD4 765 aa9.45□□□□□ -0.9
UBE3B-208ENST00000538070 SLC35G2Q8TBE7 412 aa9.45□□□□□ -0.9
UBE3B-208ENST00000538070 POMGNT1Q8WZA1 660 aa9.45□□□□□ -0.9
UBE3B-208ENST00000538070 ARL8AQ96BM9 186 aa9.45□□□□□ -0.9
UBE3B-208ENST00000538070 THAP2Q9H0W7 228 aa9.45□□□□□ -0.9
UBE3B-208ENST00000538070 AIPL1Q9NZN9 384 aa9.45□□□□□ -0.9
UBE3B-208ENST00000538070 CALCOCO1Q9P1Z2 691 aa9.45□□□□□ -0.9
UBE3B-208ENST00000538070 FRMD3A2A2Y4 597 aa9.45□□□□□ -0.9
UBE3B-208ENST00000538070 ICAM1P05362 532 aa9.45□□□□□ -0.9
UBE3B-208ENST00000538070 CYP3A4P08684 503 aa9.45□□□□□ -0.9
UBE3B-208ENST00000538070 HMGB2P26583 209 aaKnown RBP9.45□□□□□ -0.9
UBE3B-208ENST00000538070 SOX5P35711 763 aa9.45□□□□□ -0.9
UBE3B-208ENST00000538070 TNNC1P63316 161 aa9.45□□□□□ -0.9
UBE3B-208ENST00000538070 BFSP1Q12934 665 aa9.45□□□□□ -0.9
UBE3B-208ENST00000538070 SEZ6Q53EL9 994 aa9.45□□□□□ -0.9
UBE3B-208ENST00000538070 SEPT14Q6ZU15 432 aa9.45□□□□□ -0.9
UBE3B-208ENST00000538070 EPM2AIP1Q7L775 607 aaPredicted RBP9.45□□□□□ -0.9
UBE3B-208ENST00000538070 ARHGEF19Q8IW93 802 aa9.45□□□□□ -0.9
UBE3B-208ENST00000538070 RNF10Q8N5U6 811 aaKnown RBP9.45□□□□□ -0.9
UBE3B-208ENST00000538070 METTL13Q8N6R0 699 aa9.45□□□□□ -0.9
UBE3B-208ENST00000538070 ARHGEF26Q96DR7 871 aa9.45□□□□□ -0.9
UBE3B-208ENST00000538070 EDEM3Q9BZQ6 932 aa9.45□□□□□ -0.9
UBE3B-208ENST00000538070 AMFRQ9UKV5 643 aa9.45□□□□□ -0.9
UBE3B-208ENST00000538070 TLDC2A0PJX2 215 aa9.44□□□□□ -0.9
UBE3B-208ENST00000538070 HNRNPDLO14979 420 aaKnown RBP9.44□□□□□ -0.9
UBE3B-208ENST00000538070 CYP26A1O43174 497 aa9.44□□□□□ -0.9
UBE3B-208ENST00000538070 BUB1BO60566 1050 aaPredicted RBP9.44□□□□□ -0.9
UBE3B-208ENST00000538070 SYF2O95926 243 aaKnown RBP9.44□□□□□ -0.9
UBE3B-208ENST00000538070 FERP16591 822 aa9.44□□□□□ -0.9
UBE3B-208ENST00000538070 BAG6P46379 1132 aa9.44□□□□□ -0.9
UBE3B-208ENST00000538070 VAMP7P51809 220 aa9.44□□□□□ -0.9
UBE3B-208ENST00000538070 PPP3CAQ08209 521 aa9.44□□□□□ -0.9
UBE3B-208ENST00000538070 PHLDB3Q6NSJ2 640 aa9.44□□□□□ -0.9
UBE3B-208ENST00000538070 DAW1Q8N136 415 aa9.44□□□□□ -0.9
UBE3B-208ENST00000538070 LNX1Q8TBB1 728 aaPredicted RBP9.44□□□□□ -0.9
UBE3B-208ENST00000538070 DHX38Q92620 1227 aaKnown RBP9.44□□□□□ -0.9
UBE3B-208ENST00000538070 HSPBP1Q9NZL4 362 aa9.44□□□□□ -0.9
UBE3B-208ENST00000538070 ANKRD31Q8N7Z5 1873 aa9.44□□□□□ -0.9
UBE3B-208ENST00000538070 DENND3A2RUS2 1198 aa9.44□□□□□ -0.9
UBE3B-208ENST00000538070 TUBBP07437 444 aa9.44□□□□□ -0.9
UBE3B-208ENST00000538070 PPP2R5CQ13362 524 aa9.44□□□□□ -0.9
UBE3B-208ENST00000538070 BIRC3Q13489 604 aa9.44□□□□□ -0.9
UBE3B-208ENST00000538070 MEI1Q5TIA1 1274 aa9.44□□□□□ -0.9
UBE3B-208ENST00000538070 ANGEL2Q5VTE6 544 aaKnown RBP9.44□□□□□ -0.9
UBE3B-208ENST00000538070 RPUSD2Q8IZ73 545 aaKnown RBP9.44□□□□□ -0.9
UBE3B-208ENST00000538070 CASKIN2Q8WXE0 1202 aa9.44□□□□□ -0.9
UBE3B-208ENST00000538070 TRIM51Q9BSJ1 452 aa9.44□□□□□ -0.9
UBE3B-208ENST00000538070 PAGR1Q9BTK6 254 aa9.44□□□□□ -0.9
UBE3B-208ENST00000538070 SIX2Q9NPC8 291 aa9.44□□□□□ -0.9
UBE3B-208ENST00000538070 PTPN22Q9Y2R2 807 aa9.44□□□□□ -0.9
UBE3B-208ENST00000538070 NOC2LQ9Y3T9 749 aaKnown RBP9.44□□□□□ -0.9
UBE3B-208ENST00000538070 IGSF9BQ9UPX0 1349 aa9.44□□□□□ -0.9
UBE3B-208ENST00000538070 F8VZ95 297 aa9.44□□□□□ -0.9
UBE3B-208ENST00000538070 PIK3CDO00329 1044 aa9.44□□□□□ -0.9
UBE3B-208ENST00000538070 FTLP02792 175 aaPredicted RBP9.44□□□□□ -0.9
UBE3B-208ENST00000538070 NF2P35240 595 aa9.44□□□□□ -0.9
UBE3B-208ENST00000538070 RARRES1P49788 294 aa9.44□□□□□ -0.9
UBE3B-208ENST00000538070 MXI1P50539 228 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms