RNA–Protein interactions for RNA: ENST00000537194.6

SMAD3-203, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-203ENST00000537194 FAM217BQ9NTX9 383 aaPredicted RBP10.06□□□□□ -0.8
SMAD3-203ENST00000537194 SEPT9Q9UHD8 586 aaPredicted RBP10.06□□□□□ -0.8
SMAD3-203ENST00000537194 DBR1Q9UK59 544 aaKnown RBP10.06□□□□□ -0.8
SMAD3-203ENST00000537194 SORCS3Q9UPU3 1222 aa10.06□□□□□ -0.8
SMAD3-203ENST00000537194 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.05□□□□□ -0.8
SMAD3-203ENST00000537194 HIDE1A8MVS5 230 aa10.05□□□□□ -0.8
SMAD3-203ENST00000537194 MARCH6O60337 910 aa10.05□□□□□ -0.8
SMAD3-203ENST00000537194 ZC3H11AO75152 810 aaKnown RBP eCLIP10.05□□□□□ -0.8
SMAD3-203ENST00000537194 REC8O95072 547 aa10.05□□□□□ -0.8
SMAD3-203ENST00000537194 AVPR2P30518 371 aa10.05□□□□□ -0.8
SMAD3-203ENST00000537194 POLGP54098 1239 aaPredicted RBP10.05□□□□□ -0.8
SMAD3-203ENST00000537194 SSRP1Q08945 709 aaKnown RBP10.05□□□□□ -0.8
SMAD3-203ENST00000537194 COL9A3Q14050 684 aaPredicted RBP10.05□□□□□ -0.8
SMAD3-203ENST00000537194 ADCK5Q3MIX3 580 aa10.05□□□□□ -0.8
SMAD3-203ENST00000537194 MTERF2Q49AM1 385 aa10.05□□□□□ -0.8
SMAD3-203ENST00000537194 XKR3Q5GH77 459 aa10.05□□□□□ -0.8
SMAD3-203ENST00000537194 CATSPER4Q7RTX7 472 aa10.05□□□□□ -0.8
SMAD3-203ENST00000537194 RASEFQ8IZ41 740 aa10.05□□□□□ -0.8
SMAD3-203ENST00000537194 SLC39A11Q8N1S5 342 aa10.05□□□□□ -0.8
SMAD3-203ENST00000537194 TDRD5Q8NAT2 981 aaKnown RBP10.05□□□□□ -0.8
SMAD3-203ENST00000537194 KREMEN2Q8NCW0 462 aa10.05□□□□□ -0.8
SMAD3-203ENST00000537194 PRSS33Q8NF86 280 aa10.05□□□□□ -0.8
SMAD3-203ENST00000537194 VN1R2Q8NFZ6 395 aa10.05□□□□□ -0.8
SMAD3-203ENST00000537194 URGCPQ8TCY9 931 aa10.05□□□□□ -0.8
SMAD3-203ENST00000537194 CRYGNQ8WXF5 182 aa10.05□□□□□ -0.8
SMAD3-203ENST00000537194 ACSF2Q96CM8 615 aaPredicted RBP10.05□□□□□ -0.8
SMAD3-203ENST00000537194 S1PR5Q9H228 398 aa10.05□□□□□ -0.8
SMAD3-203ENST00000537194 ADAM7Q9H2U9 754 aa10.05□□□□□ -0.8
SMAD3-203ENST00000537194 ADAMTS10Q9H324 1103 aa10.05□□□□□ -0.8
SMAD3-203ENST00000537194 SH3GLB2Q9NR46 395 aa10.05□□□□□ -0.8
SMAD3-203ENST00000537194 HCSTQ9UBK5 93 aa10.05□□□□□ -0.8
SMAD3-203ENST00000537194 HCFC2Q9Y5Z7 792 aa10.05□□□□□ -0.8
SMAD3-203ENST00000537194 C2orf71A6NGG8 1288 aa10.04□□□□□ -0.8
SMAD3-203ENST00000537194 DDX11L8A8MPP1 907 aa10.04□□□□□ -0.8
SMAD3-203ENST00000537194 MSH4O15457 936 aa10.04□□□□□ -0.8
SMAD3-203ENST00000537194 PBX3P40426 434 aa10.04□□□□□ -0.8
SMAD3-203ENST00000537194 BCAR1P56945 870 aa10.04□□□□□ -0.8
SMAD3-203ENST00000537194 RBM10P98175 930 aaKnown RBP10.04□□□□□ -0.8
SMAD3-203ENST00000537194 CLLU1OSQ5K130 101 aa10.04□□□□□ -0.8
SMAD3-203ENST00000537194 RARS2Q5T160 578 aaKnown RBP10.04□□□□□ -0.8
SMAD3-203ENST00000537194 IER5LQ5T953 404 aa10.04□□□□□ -0.8
SMAD3-203ENST00000537194 GALNT17Q6IS24 598 aa10.04□□□□□ -0.8
SMAD3-203ENST00000537194 SYCE2Q6PIF2 218 aa10.04□□□□□ -0.8
SMAD3-203ENST00000537194 LRRC55Q6ZSA7 311 aa10.04□□□□□ -0.8
SMAD3-203ENST00000537194 CABP7Q86V35 215 aa10.04□□□□□ -0.8
SMAD3-203ENST00000537194 ZNF410Q86VK4 478 aa10.04□□□□□ -0.8
SMAD3-203ENST00000537194 VPS52Q8N1B4 723 aa10.04□□□□□ -0.8
SMAD3-203ENST00000537194 PHKBQ93100 1093 aa10.04□□□□□ -0.8
SMAD3-203ENST00000537194 ZNF668Q96K58 619 aaPredicted RBP10.04□□□□□ -0.8
SMAD3-203ENST00000537194 EMILIN2Q9BXX0 1053 aa10.04□□□□□ -0.8
SMAD3-203ENST00000537194 SLKQ9H2G2 1235 aaPredicted RBP10.04□□□□□ -0.8
SMAD3-203ENST00000537194 VPS54Q9P1Q0 977 aa10.04□□□□□ -0.8
SMAD3-203ENST00000537194 KANSL3Q9P2N6 904 aa10.04□□□□□ -0.8
SMAD3-203ENST00000537194 DPP7Q9UHL4 492 aa10.04□□□□□ -0.8
SMAD3-203ENST00000537194 PIN4Q9Y237 131 aaKnown RBP10.04□□□□□ -0.8
SMAD3-203ENST00000537194 INPP5FQ9Y2H2 1132 aa10.04□□□□□ -0.8
SMAD3-203ENST00000537194 TRIOO75962 3097 aa10.04□□□□□ -0.8
SMAD3-203ENST00000537194 RIF1Q5UIP0 2472 aaKnown RBP10.04□□□□□ -0.8
SMAD3-203ENST00000537194 FAM186AA6NE01 2351 aa10.03□□□□□ -0.8
SMAD3-203ENST00000537194 NT5C1B-RDH14C9J2C7 533 aa10.03□□□□□ -0.8
SMAD3-203ENST00000537194 ZNF862O60290 1169 aa10.03□□□□□ -0.8
SMAD3-203ENST00000537194 GFRA3O60609 400 aa10.03□□□□□ -0.8
SMAD3-203ENST00000537194 CLASP2O75122 1294 aaKnown RBP10.03□□□□□ -0.8
SMAD3-203ENST00000537194 IFNAR1P17181 557 aa10.03□□□□□ -0.8
SMAD3-203ENST00000537194 XBP1P17861 261 aa10.03□□□□□ -0.8
SMAD3-203ENST00000537194 FGFR4P22455 802 aa10.03□□□□□ -0.8
SMAD3-203ENST00000537194 RPS6KB1P23443 525 aa10.03□□□□□ -0.8
SMAD3-203ENST00000537194 PHKA2P46019 1235 aa10.03□□□□□ -0.8
SMAD3-203ENST00000537194 CCT2P78371 535 aaKnown RBP10.03□□□□□ -0.8
SMAD3-203ENST00000537194 NCBP1Q09161 790 aaKnown RBP10.03□□□□□ -0.8
SMAD3-203ENST00000537194 KCNC3Q14003 757 aa10.03□□□□□ -0.8
SMAD3-203ENST00000537194 NOMO2Q5JPE7 1267 aa10.03□□□□□ -0.8
SMAD3-203ENST00000537194 DDX53Q86TM3 631 aaKnown RBP10.03□□□□□ -0.8
SMAD3-203ENST00000537194 RHPN2Q8IUC4 686 aa10.03□□□□□ -0.8
SMAD3-203ENST00000537194 FAM177A1Q8N128 213 aaPredicted RBP10.03□□□□□ -0.8
SMAD3-203ENST00000537194 LINC01465Q8N7H1 131 aa10.03□□□□□ -0.8
SMAD3-203ENST00000537194 TBCKQ8TEA7 893 aa10.03□□□□□ -0.8
SMAD3-203ENST00000537194 SLC7A3Q8WY07 619 aa10.03□□□□□ -0.8
SMAD3-203ENST00000537194 SLC5A5Q92911 643 aa10.03□□□□□ -0.8
SMAD3-203ENST00000537194 ASIC4Q96FT7 647 aa10.03□□□□□ -0.8
SMAD3-203ENST00000537194 NIFKQ9BYG3 293 aaKnown RBP10.03□□□□□ -0.8
SMAD3-203ENST00000537194 GBP3Q9H0R5 595 aa10.03□□□□□ -0.8
SMAD3-203ENST00000537194 UNC45AQ9H3U1 944 aa10.03□□□□□ -0.8
SMAD3-203ENST00000537194 RNF19AQ9NV58 838 aa10.03□□□□□ -0.8
SMAD3-203ENST00000537194 SUCLA2Q9P2R7 463 aaPredicted RBP10.03□□□□□ -0.8
SMAD3-203ENST00000537194 PCDHA4Q9UN74 947 aa10.03□□□□□ -0.8
SMAD3-203ENST00000537194 USTQ9Y2C2 406 aa10.03□□□□□ -0.8
SMAD3-203ENST00000537194 SSX2IPQ9Y2D8 614 aa10.03□□□□□ -0.8
SMAD3-203ENST00000537194 NID2Q14112 1375 aa10.02□□□□□ -0.8
SMAD3-203ENST00000537194 A0A087WZ62 844 aa10.02□□□□□ -0.81
SMAD3-203ENST00000537194 NR1I2O75469 434 aa10.02□□□□□ -0.81
SMAD3-203ENST00000537194 DEXIO95424 95 aa10.02□□□□□ -0.81
SMAD3-203ENST00000537194 CTSAP10619 480 aa10.02□□□□□ -0.81
SMAD3-203ENST00000537194 CPA1P15085 419 aa10.02□□□□□ -0.81
SMAD3-203ENST00000537194 RFX1P22670 979 aa10.02□□□□□ -0.81
SMAD3-203ENST00000537194 KLRC2P26717 231 aa10.02□□□□□ -0.81
SMAD3-203ENST00000537194 PSMC5P62195 406 aa10.02□□□□□ -0.81
SMAD3-203ENST00000537194 NONOQ15233 471 aaKnown RBP eCLIP10.02□□□□□ -0.81
SMAD3-203ENST00000537194 Q4G0T1 1027 aa10.02□□□□□ -0.81
SMAD3-203ENST00000537194 KIAA1841Q6NSI8 718 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms