RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 KANK2Q63ZY3 851 aa6.95□□□□□ -1.3
PRKDC-208ENST00000536710 OR5AN1Q8NGI8 311 aa6.95□□□□□ -1.3
PRKDC-208ENST00000536710 FATE1Q969F0 183 aa6.95□□□□□ -1.3
PRKDC-208ENST00000536710 TIFAQ96CG3 184 aa6.95□□□□□ -1.3
PRKDC-208ENST00000536710 WRNIP1Q96S55 665 aa6.95□□□□□ -1.3
PRKDC-208ENST00000536710 PITHD1Q9GZP4 211 aaPredicted RBP6.95□□□□□ -1.3
PRKDC-208ENST00000536710 EVLQ9UI08 416 aaPredicted RBP6.95□□□□□ -1.3
PRKDC-208ENST00000536710 SERPINB13Q9UIV8 391 aa6.95□□□□□ -1.3
PRKDC-208ENST00000536710 A0A0A6YYJ9 748 aa6.94□□□□□ -1.3
PRKDC-208ENST00000536710 TEX51A0A1B0GUA7 166 aa6.94□□□□□ -1.3
PRKDC-208ENST00000536710 LRRC10BA6NIK2 292 aa6.94□□□□□ -1.3
PRKDC-208ENST00000536710 NRP2O60462 931 aa6.94□□□□□ -1.3
PRKDC-208ENST00000536710 CTNND1O60716 968 aaKnown RBP6.94□□□□□ -1.3
PRKDC-208ENST00000536710 JUNBP17275 347 aaPredicted RBP6.94□□□□□ -1.3
PRKDC-208ENST00000536710 ITGB5P18084 799 aa6.94□□□□□ -1.3
PRKDC-208ENST00000536710 NRG3P56975 720 aa6.94□□□□□ -1.3
PRKDC-208ENST00000536710 ADAM9Q13443 819 aa6.94□□□□□ -1.3
PRKDC-208ENST00000536710 SMAD4Q13485 552 aaKnown RBP6.94□□□□□ -1.3
PRKDC-208ENST00000536710 STILQ15468 1287 aa6.94□□□□□ -1.3
PRKDC-208ENST00000536710 ANO4Q32M45 955 aa6.94□□□□□ -1.3
PRKDC-208ENST00000536710 GRAMD4Q6IC98 578 aa6.94□□□□□ -1.3
PRKDC-208ENST00000536710 LMBR1LQ6UX01 489 aa6.94□□□□□ -1.3
PRKDC-208ENST00000536710 GAREM2Q75VX8 874 aa6.94□□□□□ -1.3
PRKDC-208ENST00000536710 BMP8AQ7Z5Y6 402 aa6.94□□□□□ -1.3
PRKDC-208ENST00000536710 SLC41A1Q8IVJ1 513 aa6.94□□□□□ -1.3
PRKDC-208ENST00000536710 IGDCC3Q8IVU1 814 aa6.94□□□□□ -1.3
PRKDC-208ENST00000536710 GRAMD1CQ8IYS0 662 aa6.94□□□□□ -1.3
PRKDC-208ENST00000536710 KYQ8NBH2 561 aa6.94□□□□□ -1.3
PRKDC-208ENST00000536710 ZBTB8AQ96BR9 441 aa6.94□□□□□ -1.3
PRKDC-208ENST00000536710 DYDC2Q96IM9 177 aa6.94□□□□□ -1.3
PRKDC-208ENST00000536710 MAP3K14Q99558 947 aa6.94□□□□□ -1.3
PRKDC-208ENST00000536710 POLR3GLQ9BT43 218 aa6.94□□□□□ -1.3
PRKDC-208ENST00000536710 C11orf84Q9BUA3 381 aaPredicted RBP6.94□□□□□ -1.3
PRKDC-208ENST00000536710 GTPBP4Q9BZE4 634 aaKnown RBP6.94□□□□□ -1.3
PRKDC-208ENST00000536710 FAM53CQ9NYF3 392 aa6.94□□□□□ -1.3
PRKDC-208ENST00000536710 N4BP3O15049 544 aa6.93□□□□□ -1.3
PRKDC-208ENST00000536710 CUTAO60888 179 aa6.93□□□□□ -1.3
PRKDC-208ENST00000536710 DTNBO60941 627 aa6.93□□□□□ -1.3
PRKDC-208ENST00000536710 POU2F2P09086 479 aa6.93□□□□□ -1.3
PRKDC-208ENST00000536710 MYBP10242 640 aa6.93□□□□□ -1.3
PRKDC-208ENST00000536710 GPR15P49685 360 aa6.93□□□□□ -1.3
PRKDC-208ENST00000536710 IRAK1P51617 712 aa6.93□□□□□ -1.3
PRKDC-208ENST00000536710 MGAT5Q09328 741 aa6.93□□□□□ -1.3
PRKDC-208ENST00000536710 MALLQ13021 153 aa6.93□□□□□ -1.3
PRKDC-208ENST00000536710 ADRM1Q16186 407 aa6.93□□□□□ -1.3
PRKDC-208ENST00000536710 MUM1L1Q5H9M0 696 aa6.93□□□□□ -1.3
PRKDC-208ENST00000536710 LILRA6Q6PI73 481 aa6.93□□□□□ -1.3
PRKDC-208ENST00000536710 CXXC5Q7LFL8 322 aaKnown RBP6.93□□□□□ -1.3
PRKDC-208ENST00000536710 GLB1L2Q8IW92 636 aa6.93□□□□□ -1.3
PRKDC-208ENST00000536710 TTLL6Q8N841 843 aa6.93□□□□□ -1.3
PRKDC-208ENST00000536710 SLC35G2Q8TBE7 412 aa6.93□□□□□ -1.3
PRKDC-208ENST00000536710 COA7Q96BR5 231 aa6.93□□□□□ -1.3
PRKDC-208ENST00000536710 NOX5Q96PH1 765 aa6.93□□□□□ -1.3
PRKDC-208ENST00000536710 ADI1Q9BV57 179 aa6.93□□□□□ -1.3
PRKDC-208ENST00000536710 ARNT2Q9HBZ2 717 aa6.93□□□□□ -1.3
PRKDC-208ENST00000536710 KCND1Q9NSA2 647 aa6.93□□□□□ -1.3
PRKDC-208ENST00000536710 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.93□□□□□ -1.3
PRKDC-208ENST00000536710 SAE1Q9UBE0 346 aaPredicted RBP6.93□□□□□ -1.3
PRKDC-208ENST00000536710 DNAI1Q9UI46 699 aa6.93□□□□□ -1.3
PRKDC-208ENST00000536710 CDC42EP3Q9UKI2 254 aa6.93□□□□□ -1.3
PRKDC-208ENST00000536710 FRMPD2Q68DX3 1309 aaPredicted RBP6.93□□□□□ -1.3
PRKDC-208ENST00000536710 CARMIL2Q6F5E8 1435 aa6.93□□□□□ -1.3
PRKDC-208ENST00000536710 H0Y858 1186 aa6.92□□□□□ -1.3
PRKDC-208ENST00000536710 SEMA7AO75326 666 aa6.92□□□□□ -1.3
PRKDC-208ENST00000536710 CYP7B1O75881 506 aa6.92□□□□□ -1.3
PRKDC-208ENST00000536710 GSPT1P15170 499 aaKnown RBP6.92□□□□□ -1.3
PRKDC-208ENST00000536710 PDCP20941 246 aa6.92□□□□□ -1.3
PRKDC-208ENST00000536710 GRM3Q14832 879 aa6.92□□□□□ -1.3
PRKDC-208ENST00000536710 RTP5Q14D33 572 aa6.92□□□□□ -1.3
PRKDC-208ENST00000536710 CCDC178Q5BJE1 867 aa6.92□□□□□ -1.3
PRKDC-208ENST00000536710 TRMT10BQ6PF06 316 aaKnown RBP6.92□□□□□ -1.3
PRKDC-208ENST00000536710 BTNL9Q6UXG8 535 aa6.92□□□□□ -1.3
PRKDC-208ENST00000536710 CAMKK1Q8N5S9 505 aa6.92□□□□□ -1.3
PRKDC-208ENST00000536710 NRG4Q8WWG1 115 aa6.92□□□□□ -1.3
PRKDC-208ENST00000536710 SLC12A5Q9H2X9 1139 aa6.92□□□□□ -1.3
PRKDC-208ENST00000536710 DMRT3Q9NQL9 472 aa6.92□□□□□ -1.3
PRKDC-208ENST00000536710 POLR3BQ9NW08 1133 aaPredicted RBP6.92□□□□□ -1.3
PRKDC-208ENST00000536710 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.92□□□□□ -1.3
PRKDC-208ENST00000536710 DDX20Q9UHI6 824 aaKnown RBP6.92□□□□□ -1.3
PRKDC-208ENST00000536710 INTUQ9ULD6 942 aa6.92□□□□□ -1.3
PRKDC-208ENST00000536710 A0A0G2JNJ9 132 aa6.91□□□□□ -1.3
PRKDC-208ENST00000536710 CCDC154A6NI56 674 aa6.91□□□□□ -1.3
PRKDC-208ENST00000536710 IGFBP6P24592 240 aaPredicted RBP6.91□□□□□ -1.3
PRKDC-208ENST00000536710 ANTXR2P58335 489 aa6.91□□□□□ -1.3
PRKDC-208ENST00000536710 USP45Q70EL2 814 aa6.91□□□□□ -1.3
PRKDC-208ENST00000536710 GLB1L3Q8NCI6 653 aaPredicted RBP6.91□□□□□ -1.3
PRKDC-208ENST00000536710 KCNN1Q92952 543 aa6.91□□□□□ -1.3
PRKDC-208ENST00000536710 HPS3Q969F9 1004 aa6.91□□□□□ -1.3
PRKDC-208ENST00000536710 TAAR9Q96RI9 348 aa6.91□□□□□ -1.3
PRKDC-208ENST00000536710 GREM2Q9H772 168 aa6.91□□□□□ -1.3
PRKDC-208ENST00000536710 C1orf112Q9NSG2 853 aa6.91□□□□□ -1.3
PRKDC-208ENST00000536710 Q9UFV3 132 aa6.91□□□□□ -1.3
PRKDC-208ENST00000536710 PMF1-BGLAPU3KQ54 211 aa6.91□□□□□ -1.3
PRKDC-208ENST00000536710 KCNQ1P51787 676 aa6.9□□□□□ -1.3
PRKDC-208ENST00000536710 HDAC1Q13547 482 aaPredicted RBP6.9□□□□□ -1.3
PRKDC-208ENST00000536710 GBX1Q14549 363 aa6.9□□□□□ -1.3
PRKDC-208ENST00000536710 NOMO1Q15155 1222 aa6.9□□□□□ -1.3
PRKDC-208ENST00000536710 ATAT1Q5SQI0 421 aa6.9□□□□□ -1.3
PRKDC-208ENST00000536710 B3GNT9Q6UX72 402 aa6.9□□□□□ -1.3
PRKDC-208ENST00000536710 FBXO15Q8NCQ5 510 aaPredicted RBP6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms