RNA–Protein interactions for RNA: ENST00000533196.1

SMPD1-209, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 3

Gene SMPD1, Length 425 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-209ENST00000533196 LRRC43Q8N309 656 aa26.22■■□□□ 1.79
SMPD1-209ENST00000533196 POF1BQ8WVV4 589 aa26.22■■□□□ 1.79
SMPD1-209ENST00000533196 TCP11Q8WWU5 503 aa26.22■■□□□ 1.79
SMPD1-209ENST00000533196 DYDC2Q96IM9 177 aa26.22■■□□□ 1.79
SMPD1-209ENST00000533196 CASD1Q96PB1 797 aa26.22■■□□□ 1.79
SMPD1-209ENST00000533196 CWH43Q9H720 699 aa26.22■■□□□ 1.79
SMPD1-209ENST00000533196 CLDND1Q9NY35 253 aa26.22■■□□□ 1.79
SMPD1-209ENST00000533196 GRXCR2A6NFK2 248 aa26.21■■□□□ 1.79
SMPD1-209ENST00000533196 LYPLA2O95372 231 aa26.21■■□□□ 1.79
SMPD1-209ENST00000533196 SKIP12755 728 aa26.21■■□□□ 1.79
SMPD1-209ENST00000533196 HYAL1Q12794 435 aa26.21■■□□□ 1.79
SMPD1-209ENST00000533196 ZNF598Q86UK7 904 aaKnown RBP26.21■■□□□ 1.79
SMPD1-209ENST00000533196 CCDC83Q8IWF9 413 aa26.21■■□□□ 1.79
SMPD1-209ENST00000533196 COLGALT1Q8NBJ5 622 aa26.21■■□□□ 1.79
SMPD1-209ENST00000533196 PSPC1Q8WXF1 523 aaKnown RBP26.21■■□□□ 1.79
SMPD1-209ENST00000533196 RNF19AQ9NV58 838 aa26.21■■□□□ 1.79
SMPD1-209ENST00000533196 RGL1Q9NZL6 768 aa26.21■■□□□ 1.79
SMPD1-209ENST00000533196 COL4A3BPQ9Y5P4 624 aa26.21■■□□□ 1.79
SMPD1-209ENST00000533196 ASAP2O43150 1006 aa26.2■■□□□ 1.78
SMPD1-209ENST00000533196 SLITRK3O94933 977 aa26.2■■□□□ 1.78
SMPD1-209ENST00000533196 FGFR4P22455 802 aa26.2■■□□□ 1.78
SMPD1-209ENST00000533196 DNAJB1P25685 340 aa26.2■■□□□ 1.78
SMPD1-209ENST00000533196 ORC2Q13416 577 aaPredicted RBP26.2■■□□□ 1.78
SMPD1-209ENST00000533196 C8orf76Q96K31 380 aa26.2■■□□□ 1.78
SMPD1-209ENST00000533196 MTMR9Q96QG7 549 aa26.2■■□□□ 1.78
SMPD1-209ENST00000533196 HSD17B14Q9BPX1 270 aa26.2■■□□□ 1.78
SMPD1-209ENST00000533196 TTC12Q9H892 705 aaPredicted RBP26.2■■□□□ 1.78
SMPD1-209ENST00000533196 LZTS1Q9Y250 596 aa26.2■■□□□ 1.78
SMPD1-209ENST00000533196 FGF18O76093 207 aa26.19■■□□□ 1.78
SMPD1-209ENST00000533196 CTTNQ14247 550 aaKnown RBP26.19■■□□□ 1.78
SMPD1-209ENST00000533196 XKR9Q5GH70 373 aa26.19■■□□□ 1.78
SMPD1-209ENST00000533196 PDE12Q6L8Q7 609 aaKnown RBP26.19■■□□□ 1.78
SMPD1-209ENST00000533196 EP400NLQ6ZTU2 488 aa26.19■■□□□ 1.78
SMPD1-209ENST00000533196 SRGAP1Q7Z6B7 1085 aa26.19■■□□□ 1.78
SMPD1-209ENST00000533196 TPH2Q8IWU9 490 aa26.19■■□□□ 1.78
SMPD1-209ENST00000533196 THNSL1Q8IYQ7 743 aa26.19■■□□□ 1.78
SMPD1-209ENST00000533196 NLRP4Q96MN2 994 aa26.19■■□□□ 1.78
SMPD1-209ENST00000533196 KIF2CQ99661 725 aa26.19■■□□□ 1.78
SMPD1-209ENST00000533196 EIF2AK1Q9BQI3 630 aaKnown RBP26.19■■□□□ 1.78
SMPD1-209ENST00000533196 MRPL9Q9BYD2 267 aaKnown RBP26.19■■□□□ 1.78
SMPD1-209ENST00000533196 FOXP1Q9H334 677 aaPredicted RBP26.19■■□□□ 1.78
SMPD1-209ENST00000533196 IFT122Q9HBG6 1241 aa26.19■■□□□ 1.78
SMPD1-209ENST00000533196 FSD2A1L4K1 749 aa26.18■■□□□ 1.78
SMPD1-209ENST00000533196 H3BQ06 376 aaPredicted RBP26.18■■□□□ 1.78
SMPD1-209ENST00000533196 CSDE1O75534 798 aaKnown RBP26.18■■□□□ 1.78
SMPD1-209ENST00000533196 PPM1AP35813 382 aa26.18■■□□□ 1.78
SMPD1-209ENST00000533196 LTBRP36941 435 aa26.18■■□□□ 1.78
SMPD1-209ENST00000533196 TXKP42681 527 aa26.18■■□□□ 1.78
SMPD1-209ENST00000533196 RBM25P49756 843 aaKnown RBP26.18■■□□□ 1.78
SMPD1-209ENST00000533196 RAB27AP51159 221 aa26.18■■□□□ 1.78
SMPD1-209ENST00000533196 FOSBP53539 338 aa26.18■■□□□ 1.78
SMPD1-209ENST00000533196 PLCB3Q01970 1234 aa26.18■■□□□ 1.78
SMPD1-209ENST00000533196 CYP4A11Q02928 519 aa26.18■■□□□ 1.78
SMPD1-209ENST00000533196 EMC2Q15006 297 aa26.18■■□□□ 1.78
SMPD1-209ENST00000533196 CATSPER4Q7RTX7 472 aa26.18■■□□□ 1.78
SMPD1-209ENST00000533196 FAM178BQ8IXR5 827 aa26.18■■□□□ 1.78
SMPD1-209ENST00000533196 ZNF579Q8NAF0 562 aaKnown RBP26.18■■□□□ 1.78
SMPD1-209ENST00000533196 ANKEF1Q9NU02 776 aa26.18■■□□□ 1.78
SMPD1-209ENST00000533196 CARNS1A5YM72 827 aa26.17■■□□□ 1.78
SMPD1-209ENST00000533196 IL9P15248 144 aa26.17■■□□□ 1.78
SMPD1-209ENST00000533196 PHKA2P46019 1235 aa26.17■■□□□ 1.78
SMPD1-209ENST00000533196 ADAM15Q13444 863 aa26.17■■□□□ 1.78
SMPD1-209ENST00000533196 TWF2Q6IBS0 349 aaKnown RBP26.17■■□□□ 1.78
SMPD1-209ENST00000533196 KSR1Q8IVT5 923 aa26.17■■□□□ 1.78
SMPD1-209ENST00000533196 PRPF31Q8WWY3 499 aaKnown RBP26.17■■□□□ 1.78
SMPD1-209ENST00000533196 MTRQ99707 1265 aa26.17■■□□□ 1.78
SMPD1-209ENST00000533196 TLR9Q9NR96 1032 aa26.17■■□□□ 1.78
SMPD1-209ENST00000533196 PUF60Q9UHX1 559 aaKnown RBP26.17■■□□□ 1.78
SMPD1-209ENST00000533196 ZNF623O75123 536 aa26.16■■□□□ 1.78
SMPD1-209ENST00000533196 XRCC6P12956 609 aaKnown RBP eCLIP26.16■■□□□ 1.78
SMPD1-209ENST00000533196 ATF7P17544 494 aaPredicted RBP26.16■■□□□ 1.78
SMPD1-209ENST00000533196 IRS1P35568 1242 aa26.16■■□□□ 1.78
SMPD1-209ENST00000533196 PCBP1Q15365 356 aaKnown RBP eCLIP26.16■■□□□ 1.78
SMPD1-209ENST00000533196 CLLU1OSQ5K130 101 aa26.16■■□□□ 1.78
SMPD1-209ENST00000533196 LRRC55Q6ZSA7 311 aa26.16■■□□□ 1.78
SMPD1-209ENST00000533196 EFHBQ8N7U6 833 aa26.16■■□□□ 1.78
SMPD1-209ENST00000533196 FAM184AQ8NB25 1140 aa26.16■■□□□ 1.78
SMPD1-209ENST00000533196 RNF169Q8NCN4 708 aa26.16■■□□□ 1.78
SMPD1-209ENST00000533196 FBXO18Q8NFZ0 1043 aa26.16■■□□□ 1.78
SMPD1-209ENST00000533196 TMEM143Q96AN5 459 aa26.16■■□□□ 1.78
SMPD1-209ENST00000533196 ZNF558Q96NG5 402 aa26.16■■□□□ 1.78
SMPD1-209ENST00000533196 PRKAG3Q9UGI9 489 aa26.16■■□□□ 1.78
SMPD1-209ENST00000533196 PIN4Q9Y237 131 aaKnown RBP26.16■■□□□ 1.78
SMPD1-209ENST00000533196 WNT7AO00755 349 aa26.15■■□□□ 1.78
SMPD1-209ENST00000533196 DGAT1O75907 488 aa26.15■■□□□ 1.78
SMPD1-209ENST00000533196 LAMTOR4Q0VGL1 99 aa26.15■■□□□ 1.78
SMPD1-209ENST00000533196 MXD4Q14582 209 aaPredicted RBP26.15■■□□□ 1.78
SMPD1-209ENST00000533196 KCNT2Q6UVM3 1135 aa26.15■■□□□ 1.78
SMPD1-209ENST00000533196 FERMT3Q86UX7 667 aa26.15■■□□□ 1.78
SMPD1-209ENST00000533196 MRPS27Q92552 414 aaKnown RBP26.15■■□□□ 1.78
SMPD1-209ENST00000533196 C1QTNF1Q9BXJ1 281 aa26.15■■□□□ 1.78
SMPD1-209ENST00000533196 IGFLR1Q9H665 355 aa26.15■■□□□ 1.78
SMPD1-209ENST00000533196 AGPAT5Q9NUQ2 364 aa26.15■■□□□ 1.78
SMPD1-209ENST00000533196 FAM105AQ9NUU6 356 aa26.15■■□□□ 1.78
SMPD1-209ENST00000533196 HCSTQ9UBK5 93 aa26.15■■□□□ 1.78
SMPD1-209ENST00000533196 GUCY1B3Q02153 619 aa26.14■■□□□ 1.78
SMPD1-209ENST00000533196 RABEP1Q15276 862 aa26.14■■□□□ 1.78
SMPD1-209ENST00000533196 MICAL1Q8TDZ2 1067 aa26.14■■□□□ 1.78
SMPD1-209ENST00000533196 CDCA3Q99618 268 aaPredicted RBP26.14■■□□□ 1.78
SMPD1-209ENST00000533196 FSCN2O14926 492 aa26.13■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms