RNA–Protein interactions for RNA: ENST00000529994.1

SF3B2-208, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-208ENST00000529994 DTWD2Q8NBA8 298 aa12.81□□□□□ -0.36
SF3B2-208ENST00000529994 SLC22A17Q8WUG5 538 aa12.81□□□□□ -0.36
SF3B2-208ENST00000529994 JAKMIP1Q96N16 626 aaKnown RBP12.81□□□□□ -0.36
SF3B2-208ENST00000529994 ZNF577Q9BSK1 485 aa12.81□□□□□ -0.36
SF3B2-208ENST00000529994 GABBR1Q9UBS5 961 aa12.81□□□□□ -0.36
SF3B2-208ENST00000529994 TCEAL9Q9UHQ7 104 aa12.81□□□□□ -0.36
SF3B2-208ENST00000529994 USTQ9Y2C2 406 aa12.81□□□□□ -0.36
SF3B2-208ENST00000529994 V9GY48 417 aaPredicted RBP12.81□□□□□ -0.36
SF3B2-208ENST00000529994 FRYLO94915 3013 aa12.8□□□□□ -0.36
SF3B2-208ENST00000529994 IGLV3-22A0A075B6J6 115 aa12.8□□□□□ -0.36
SF3B2-208ENST00000529994 A0A0U1RQF3 1178 aa12.8□□□□□ -0.36
SF3B2-208ENST00000529994 STK25O00506 426 aa12.8□□□□□ -0.36
SF3B2-208ENST00000529994 MAGEB2O15479 319 aa12.8□□□□□ -0.36
SF3B2-208ENST00000529994 NARSO43776 548 aaKnown RBP12.8□□□□□ -0.36
SF3B2-208ENST00000529994 SSBP05455 408 aaKnown RBP eCLIP12.8□□□□□ -0.36
SF3B2-208ENST00000529994 DARSP14868 501 aaKnown RBP12.8□□□□□ -0.36
SF3B2-208ENST00000529994 TMOD1P28289 359 aa12.8□□□□□ -0.36
SF3B2-208ENST00000529994 CLK2P49760 499 aaKnown RBP12.8□□□□□ -0.36
SF3B2-208ENST00000529994 GPC3P51654 580 aa12.8□□□□□ -0.36
SF3B2-208ENST00000529994 AP3B2Q13367 1082 aa12.8□□□□□ -0.36
SF3B2-208ENST00000529994 KRT32Q14532 448 aa12.8□□□□□ -0.36
SF3B2-208ENST00000529994 NIPA1Q7RTP0 329 aa12.8□□□□□ -0.36
SF3B2-208ENST00000529994 CCDC105Q8IYK2 499 aa12.8□□□□□ -0.36
SF3B2-208ENST00000529994 BCL7CQ8WUZ0 217 aaPredicted RBP12.8□□□□□ -0.36
SF3B2-208ENST00000529994 LPPQ93052 612 aa12.8□□□□□ -0.36
SF3B2-208ENST00000529994 ACSF2Q96CM8 615 aaPredicted RBP12.8□□□□□ -0.36
SF3B2-208ENST00000529994 MRPL9Q9BYD2 267 aaKnown RBP12.8□□□□□ -0.36
SF3B2-208ENST00000529994 PPP4R2Q9NY27 417 aa12.8□□□□□ -0.36
SF3B2-208ENST00000529994 INPP5FQ9Y2H2 1132 aa12.8□□□□□ -0.36
SF3B2-208ENST00000529994 SAMM50Q9Y512 469 aa12.8□□□□□ -0.36
SF3B2-208ENST00000529994 DNAH14Q0VDD8 3507 aa12.79□□□□□ -0.36
SF3B2-208ENST00000529994 KLF18A0A0U1RQI7 1052 aa12.79□□□□□ -0.36
SF3B2-208ENST00000529994 MED19A0JLT2 244 aaPredicted RBP12.79□□□□□ -0.36
SF3B2-208ENST00000529994 GOLGA8AA7E2F4 631 aa12.79□□□□□ -0.36
SF3B2-208ENST00000529994 GOLGA8BA8MQT2 603 aa12.79□□□□□ -0.36
SF3B2-208ENST00000529994 ADAMTS3O15072 1205 aa12.79□□□□□ -0.36
SF3B2-208ENST00000529994 PSAPP07602 524 aa12.79□□□□□ -0.36
SF3B2-208ENST00000529994 CTSAP10619 480 aa12.79□□□□□ -0.36
SF3B2-208ENST00000529994 TDGQ13569 410 aa12.79□□□□□ -0.36
SF3B2-208ENST00000529994 ZNF746Q6NUN9 644 aaPredicted RBP12.79□□□□□ -0.36
SF3B2-208ENST00000529994 PPP1R18Q6NYC8 613 aa12.79□□□□□ -0.36
SF3B2-208ENST00000529994 CCDC149Q6ZUS6 474 aa12.79□□□□□ -0.36
SF3B2-208ENST00000529994 DHX32Q7L7V1 743 aaKnown RBP12.79□□□□□ -0.36
SF3B2-208ENST00000529994 OTOP3Q7RTS5 596 aa12.79□□□□□ -0.36
SF3B2-208ENST00000529994 KIAA2013Q8IYS2 634 aa12.79□□□□□ -0.36
SF3B2-208ENST00000529994 LINC01465Q8N7H1 131 aa12.79□□□□□ -0.36
SF3B2-208ENST00000529994 NLRP7Q8WX94 980 aa12.79□□□□□ -0.36
SF3B2-208ENST00000529994 RIN2Q8WYP3 895 aaPredicted RBP12.79□□□□□ -0.36
SF3B2-208ENST00000529994 RMDN1Q96DB5 314 aa12.79□□□□□ -0.36
SF3B2-208ENST00000529994 IGSF21Q96ID5 467 aa12.79□□□□□ -0.36
SF3B2-208ENST00000529994 GBP3Q9H0R5 595 aa12.79□□□□□ -0.36
SF3B2-208ENST00000529994 KCNK12Q9HB15 430 aa12.79□□□□□ -0.36
SF3B2-208ENST00000529994 BRPF3Q9ULD4 1205 aa12.79□□□□□ -0.36
SF3B2-208ENST00000529994 CEP131Q9UPN4 1083 aa12.79□□□□□ -0.36
SF3B2-208ENST00000529994 PCDHA10Q9Y5I2 948 aa12.79□□□□□ -0.36
SF3B2-208ENST00000529994 R4GN57 208 aa12.79□□□□□ -0.36
SF3B2-208ENST00000529994 MEIS3P2A8K0S8 358 aa12.78□□□□□ -0.36
SF3B2-208ENST00000529994 ZBTB43O43298 467 aa12.78□□□□□ -0.36
SF3B2-208ENST00000529994 ZNF862O60290 1169 aa12.78□□□□□ -0.36
SF3B2-208ENST00000529994 REC8O95072 547 aa12.78□□□□□ -0.36
SF3B2-208ENST00000529994 CFHP08603 1231 aa12.78□□□□□ -0.36
SF3B2-208ENST00000529994 MYBP10242 640 aa12.78□□□□□ -0.36
SF3B2-208ENST00000529994 KLRC2P26717 231 aa12.78□□□□□ -0.36
SF3B2-208ENST00000529994 RNASELQ05823 741 aaKnown RBP12.78□□□□□ -0.36
SF3B2-208ENST00000529994 FUT2Q10981 343 aa12.78□□□□□ -0.36
SF3B2-208ENST00000529994 DRP2Q13474 957 aa12.78□□□□□ -0.36
SF3B2-208ENST00000529994 RTN1Q16799 776 aa12.78□□□□□ -0.36
SF3B2-208ENST00000529994 PRR16Q569H4 304 aa12.78□□□□□ -0.36
SF3B2-208ENST00000529994 APOA5Q6Q788 366 aa12.78□□□□□ -0.36
SF3B2-208ENST00000529994 GPR149Q86SP6 731 aa12.78□□□□□ -0.36
SF3B2-208ENST00000529994 DDX53Q86TM3 631 aaKnown RBP12.78□□□□□ -0.36
SF3B2-208ENST00000529994 SGMS1Q86VZ5 419 aa12.78□□□□□ -0.36
SF3B2-208ENST00000529994 RSAD2Q8WXG1 361 aa12.78□□□□□ -0.36
SF3B2-208ENST00000529994 RTP3Q9BQQ7 232 aa12.78□□□□□ -0.36
SF3B2-208ENST00000529994 VN1R3Q9BXE9 311 aa12.78□□□□□ -0.36
SF3B2-208ENST00000529994 NRDE2Q9H7Z3 1164 aa12.78□□□□□ -0.36
SF3B2-208ENST00000529994 SFXN1Q9H9B4 322 aa12.78□□□□□ -0.36
SF3B2-208ENST00000529994 TBC1D22BQ9NU19 505 aa12.78□□□□□ -0.36
SF3B2-208ENST00000529994 TBC1D13Q9NVG8 400 aa12.78□□□□□ -0.36
SF3B2-208ENST00000529994 BARHL2Q9NY43 387 aa12.78□□□□□ -0.36
SF3B2-208ENST00000529994 DACT1Q9NYF0 836 aa12.78□□□□□ -0.36
SF3B2-208ENST00000529994 DNAJB4Q9UDY4 337 aa12.78□□□□□ -0.36
SF3B2-208ENST00000529994 DUSP12Q9UNI6 340 aa12.78□□□□□ -0.36
SF3B2-208ENST00000529994 SNX14Q9Y5W7 946 aa12.78□□□□□ -0.36
SF3B2-208ENST00000529994 B4GALT3O60512 393 aa12.77□□□□□ -0.37
SF3B2-208ENST00000529994 OATP04181 439 aa12.77□□□□□ -0.37
SF3B2-208ENST00000529994 GALTP07902 379 aa12.77□□□□□ -0.37
SF3B2-208ENST00000529994 CYP3A4P08684 503 aa12.77□□□□□ -0.37
SF3B2-208ENST00000529994 RFX1P22670 979 aa12.77□□□□□ -0.37
SF3B2-208ENST00000529994 PHKA2P46019 1235 aa12.77□□□□□ -0.37
SF3B2-208ENST00000529994 SLC11A1P49279 550 aa12.77□□□□□ -0.37
SF3B2-208ENST00000529994 POLGP54098 1239 aaPredicted RBP12.77□□□□□ -0.37
SF3B2-208ENST00000529994 EXOSC10Q01780 885 aaKnown RBP12.77□□□□□ -0.37
SF3B2-208ENST00000529994 PRKCEQ02156 737 aa12.77□□□□□ -0.37
SF3B2-208ENST00000529994 TBC1D8BQ0IIM8 1120 aa12.77□□□□□ -0.37
SF3B2-208ENST00000529994 PTPN14Q15678 1187 aa12.77□□□□□ -0.37
SF3B2-208ENST00000529994 UGCGQ16739 394 aa12.77□□□□□ -0.37
SF3B2-208ENST00000529994 TWF2Q6IBS0 349 aaKnown RBP12.77□□□□□ -0.37
SF3B2-208ENST00000529994 BLOC1S2Q6QNY1 142 aa12.77□□□□□ -0.37
SF3B2-208ENST00000529994 Q6ZUG5 572 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms