RNA–Protein interactions for RNA: ENST00000529986.5

CTNND1-223, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-223ENST00000529986 HNRNPCL2B2RXH8 293 aa8.14□□□□□ -1.11
CTNND1-223ENST00000529986 PRPF3O43395 683 aaKnown RBP8.14□□□□□ -1.11
CTNND1-223ENST00000529986 HNRNPCL1O60812 293 aaKnown RBP8.14□□□□□ -1.11
CTNND1-223ENST00000529986 TJP3O95049 919 aa8.14□□□□□ -1.11
CTNND1-223ENST00000529986 ZRANB2O95218 330 aaKnown RBP eCLIP8.14□□□□□ -1.117e-11■■■■■ 70
CTNND1-223ENST00000529986 PDE8BO95263 885 aa8.14□□□□□ -1.11
CTNND1-223ENST00000529986 KCNA4P22459 653 aa8.14□□□□□ -1.11
CTNND1-223ENST00000529986 HSPA9P38646 679 aaKnown RBP8.14□□□□□ -1.11
CTNND1-223ENST00000529986 TMED10P49755 219 aaKnown RBP8.14□□□□□ -1.11
CTNND1-223ENST00000529986 GPS1Q13098 491 aa8.14□□□□□ -1.11
CTNND1-223ENST00000529986 CAPRIN1Q14444 709 aaKnown RBP8.14□□□□□ -1.11
CTNND1-223ENST00000529986 MORF4L2Q15014 288 aa8.14□□□□□ -1.11
CTNND1-223ENST00000529986 CNGA3Q16281 694 aa8.14□□□□□ -1.11
CTNND1-223ENST00000529986 LONRF1Q17RB8 773 aa8.14□□□□□ -1.11
CTNND1-223ENST00000529986 FAM83BQ5T0W9 1011 aa8.14□□□□□ -1.11
CTNND1-223ENST00000529986 SYCP2LQ5T4T6 812 aa8.14□□□□□ -1.11
CTNND1-223ENST00000529986 TEX2Q8IWB9 1127 aa8.14□□□□□ -1.11
CTNND1-223ENST00000529986 TRIM51Q9BSJ1 452 aa8.14□□□□□ -1.11
CTNND1-223ENST00000529986 ARL2BPQ9Y2Y0 163 aa8.14□□□□□ -1.11
CTNND1-223ENST00000529986 CAMSAP1Q5T5Y3 1602 aa8.14□□□□□ -1.11
CTNND1-223ENST00000529986 KPNA2P52292 529 aaKnown RBP8.14□□□□□ -1.11
CTNND1-223ENST00000529986 SNAP25P60880 206 aa8.14□□□□□ -1.11
CTNND1-223ENST00000529986 MED21Q13503 144 aa8.14□□□□□ -1.11
CTNND1-223ENST00000529986 CEP55Q53EZ4 464 aa8.14□□□□□ -1.11
CTNND1-223ENST00000529986 PPP1R16BQ96T49 567 aa8.14□□□□□ -1.11
CTNND1-223ENST00000529986 PARVGQ9HBI0 331 aa8.14□□□□□ -1.11
CTNND1-223ENST00000529986 NGRNQ9NPE2 291 aaKnown RBP8.14□□□□□ -1.11
CTNND1-223ENST00000529986 AURKCQ9UQB9 309 aa8.14□□□□□ -1.11
CTNND1-223ENST00000529986 LMTK2Q8IWU2 1503 aa8.13□□□□□ -1.11
CTNND1-223ENST00000529986 NPHP4O75161 1426 aaPredicted RBP8.13□□□□□ -1.11
CTNND1-223ENST00000529986 ANKARQ7Z5J8 1434 aa8.13□□□□□ -1.11
CTNND1-223ENST00000529986 SKAP2O75563 359 aaPredicted RBP8.13□□□□□ -1.11
CTNND1-223ENST00000529986 MYBL1P10243 752 aa8.13□□□□□ -1.11
CTNND1-223ENST00000529986 NSUN2Q08J23 767 aaKnown RBP eCLIP8.13□□□□□ -1.11
CTNND1-223ENST00000529986 DRP2Q13474 957 aa8.13□□□□□ -1.11
CTNND1-223ENST00000529986 DOK7Q18PE1 504 aa8.13□□□□□ -1.11
CTNND1-223ENST00000529986 EAPPQ56P03 285 aaPredicted RBP8.13□□□□□ -1.11
CTNND1-223ENST00000529986 RARS2Q5T160 578 aaKnown RBP8.13□□□□□ -1.11
CTNND1-223ENST00000529986 NAIF1Q69YI7 327 aaPredicted RBP8.13□□□□□ -1.11
CTNND1-223ENST00000529986 LRRC8EQ6NSJ5 796 aa8.13□□□□□ -1.11
CTNND1-223ENST00000529986 RINLQ6ZS11 566 aa8.13□□□□□ -1.11
CTNND1-223ENST00000529986 KIAA0825Q8IV33 1275 aa8.13□□□□□ -1.11
CTNND1-223ENST00000529986 ANKMY2Q8IV38 441 aa8.13□□□□□ -1.11
CTNND1-223ENST00000529986 SULF1Q8IWU6 871 aa8.13□□□□□ -1.11
CTNND1-223ENST00000529986 DNAJC9Q8WXX5 260 aa8.13□□□□□ -1.11
CTNND1-223ENST00000529986 ANKRD36BP1Q96IX9 119 aa8.13□□□□□ -1.11
CTNND1-223ENST00000529986 BHMT2Q9H2M3 363 aa8.13□□□□□ -1.11
CTNND1-223ENST00000529986 SUN2Q9UH99 717 aa8.13□□□□□ -1.11
CTNND1-223ENST00000529986 CCPG1Q9ULG6 757 aa8.13□□□□□ -1.11
CTNND1-223ENST00000529986 TARSL2A2RTX5 802 aaKnown RBP8.13□□□□□ -1.11
CTNND1-223ENST00000529986 USP17L3A6NCW0 530 aa8.13□□□□□ -1.11
CTNND1-223ENST00000529986 USP17L4A6NCW7 530 aa8.13□□□□□ -1.11
CTNND1-223ENST00000529986 POTEMA6NI47 508 aa8.13□□□□□ -1.11
CTNND1-223ENST00000529986 H0YCG3 227 aa8.13□□□□□ -1.11
CTNND1-223ENST00000529986 INO80B-WBP1J3KQ70 363 aa8.13□□□□□ -1.11
CTNND1-223ENST00000529986 KRT38O76015 456 aa8.13□□□□□ -1.11
CTNND1-223ENST00000529986 SASH1O94885 1247 aa8.13□□□□□ -1.11
CTNND1-223ENST00000529986 GFAPP14136 432 aa8.13□□□□□ -1.11
CTNND1-223ENST00000529986 COPS2P61201 443 aa8.13□□□□□ -1.11
CTNND1-223ENST00000529986 HIC1Q14526 733 aa8.13□□□□□ -1.11
CTNND1-223ENST00000529986 BTNL9Q6UXG8 535 aa8.13□□□□□ -1.11
CTNND1-223ENST00000529986 USP17L1Q7RTZ2 530 aa8.13□□□□□ -1.11
CTNND1-223ENST00000529986 GALNT4Q8N4A0 578 aa8.13□□□□□ -1.11
CTNND1-223ENST00000529986 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.13□□□□□ -1.11
CTNND1-223ENST00000529986 ZBTB38Q8NAP3 1195 aaPredicted RBP8.13□□□□□ -1.11
CTNND1-223ENST00000529986 PIGOQ8TEQ8 1089 aa8.13□□□□□ -1.11
CTNND1-223ENST00000529986 INO80BQ9C086 356 aaPredicted RBP8.13□□□□□ -1.11
CTNND1-223ENST00000529986 ADNPQ9H2P0 1102 aa8.13□□□□□ -1.11
CTNND1-223ENST00000529986 UBN1Q9NPG3 1134 aa8.13□□□□□ -1.11
CTNND1-223ENST00000529986 CCNL1Q9UK58 526 aaPredicted RBP8.13□□□□□ -1.11
CTNND1-223ENST00000529986 PP2D1A8MPX8 630 aa8.13□□□□□ -1.11
CTNND1-223ENST00000529986 TLR3O15455 904 aaKnown RBP8.13□□□□□ -1.11
CTNND1-223ENST00000529986 SSTR3P32745 418 aaPredicted RBP8.13□□□□□ -1.11
CTNND1-223ENST00000529986 SOX11P35716 441 aa8.13□□□□□ -1.11
CTNND1-223ENST00000529986 RAP1GDS1P52306 607 aa8.13□□□□□ -1.11
CTNND1-223ENST00000529986 GPC5P78333 572 aa8.13□□□□□ -1.11
CTNND1-223ENST00000529986 KCNH2Q12809 1159 aa8.13□□□□□ -1.11
CTNND1-223ENST00000529986 GPR162Q16538 588 aa8.13□□□□□ -1.11
CTNND1-223ENST00000529986 ERP27Q96DN0 273 aa8.13□□□□□ -1.11
CTNND1-223ENST00000529986 AMNQ9BXJ7 453 aa8.13□□□□□ -1.11
CTNND1-223ENST00000529986 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.13□□□□□ -1.119e-8■□□□□ 10.6
CTNND1-223ENST00000529986 ADAM22Q9P0K1 906 aa8.13□□□□□ -1.11
CTNND1-223ENST00000529986 MARCOQ9UEW3 520 aaPredicted RBP8.13□□□□□ -1.11
CTNND1-223ENST00000529986 DIS3Q9Y2L1 958 aaKnown RBP8.13□□□□□ -1.11
CTNND1-223ENST00000529986 M0QZ92 97 aa8.13□□□□□ -1.11
CTNND1-223ENST00000529986 IGF2BP3O00425 579 aaKnown RBP eCLIP8.13□□□□□ -1.11
CTNND1-223ENST00000529986 MAP4P27816 1152 aaKnown RBP8.13□□□□□ -1.11
CTNND1-223ENST00000529986 SOX5P35711 763 aa8.13□□□□□ -1.11
CTNND1-223ENST00000529986 GCLMP48507 274 aa8.13□□□□□ -1.11
CTNND1-223ENST00000529986 ARHGEF6Q15052 776 aa8.13□□□□□ -1.11
CTNND1-223ENST00000529986 TAF1BQ53T94 588 aaPredicted RBP8.13□□□□□ -1.11
CTNND1-223ENST00000529986 CCNI2Q6ZMN8 369 aaPredicted RBP8.13□□□□□ -1.11
CTNND1-223ENST00000529986 ERICH1Q86X53 443 aa8.13□□□□□ -1.11
CTNND1-223ENST00000529986 ATXN7L3BQ96GX2 97 aa8.13□□□□□ -1.11
CTNND1-223ENST00000529986 CALR3Q96L12 384 aaKnown RBP8.13□□□□□ -1.11
CTNND1-223ENST00000529986 CEP170P1Q96L14 293 aa8.13□□□□□ -1.11
CTNND1-223ENST00000529986 NUP85Q9BW27 656 aa8.13□□□□□ -1.11
CTNND1-223ENST00000529986 KANSL2Q9H9L4 492 aa8.13□□□□□ -1.11
CTNND1-223ENST00000529986 MID2Q9UJV3 735 aa8.13□□□□□ -1.11
CTNND1-223ENST00000529986 UBN2Q6ZU65 1347 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms